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Revision 7002

Added by Aaron Marcuse-Kubitza over 11 years ago

inputs/NVS/*/map.csv: Remapped with Nick Spencer's suggested changes

View differences:

inputs/NVS/AggregateOccurrence/map.csv
3 3 
Plot,locationName,,
4 4 
Sub Plot,subplot,,
5 5 
Method Name,*Method Name,,
6 
Species Code,*Species Code,,
6 
Species Code,authorTaxonCode,/_alt/2,
7 7 
Species Name,specificEpithet,,
8 
Verbatim Code,*Verbatim Code,,
8 
Verbatim Code,authorTaxonCode,/_alt/1,
9 9 
Taxon Bio Status,*Taxon Bio Status,,
10 10 
Taxon Palatibility,*Taxon Palatibility,,
11 11 
Taxon Growth Form,growthForm,"/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
inputs/NVS/AggregateOccurrence/VegBIEN.csv
9 9 
Plot,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/then",
10 10 
Sub Plot,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode/_if[@name=""if subplot""]/cond/_first/2",
11 11 
Plot,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
12 
Verbatim Code,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_if[@name=""if individual""]/else/_alt/1",
13 
Species Code,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_if[@name=""if individual""]/else/_alt/2",
12 14 
Taxon Growth Form,"/location/locationevent/taxonoccurrence/growthform/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
13 15 
Species Name,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
14 16 
Species Name,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
......
23 25 
Method Name,,** No join mapping for *Method Name **
24 26 
Parent Plot Obs ID,,** No join mapping for *Parent Plot Obs ID **
25 27 
Sample Method ID,,** No join mapping for *Sample Method ID **
26 
Species Code,,** No join mapping for *Species Code **
27 28 
Taxon Bio Status,,** No join mapping for *Taxon Bio Status **
28 29 
Taxon Palatibility,,** No join mapping for *Taxon Palatibility **
29 30 
Tier,,** No join mapping for *Tier **
30 31 
Tier Description,,** No join mapping for *Tier Description **
31 32 
Tier ID,,** No join mapping for *Tier ID **
32 
Verbatim Code,,** No join mapping for *Verbatim Code **
inputs/NVS/AggregateOccurrence/test.xml.ref
12 12 
                        <locationevent>
13 13 
                            <project_id><project><projectname>$Project Abbreviation</projectname></project></project_id>
14 14 
                            <taxonoccurrence>
15 
                                <authortaxoncode>
16 
                                    <_alt>
17 
                                        <1>$Verbatim Code</1>
18 
                                        <2>$Species Code</2>
19 
                                    </_alt>
20 
                                </authortaxoncode>
15 21 
                                <growthform>
16 22 
                                    <_map>
17 23 
                                        <Graminoid>grass</Graminoid>
......
84 90 
        </path>
85 91 
    </_setDefault>
86 92 
</VegBIEN>
87 
Inserted 17 new rows into database
93 
Inserted 18 new rows into database
inputs/NVS/AggregateOccurrence/new_terms.csv
1 1 
Project Abbreviation,projectName,,
2 2 
Plot,locationName,,
3 
Species Code,authorTaxonCode,/_alt/2,
4 
Verbatim Code,authorTaxonCode,/_alt/1,
3 5 
Taxon Growth Form,growthForm,"/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
4 6 
Taxon Obs Note,taxonRemarks,,
inputs/NVS/AggregateOccurrence/unmapped_terms.csv
1 1 
*Method Name
2 
*Species Code
3 
*Verbatim Code
4 2 
*Taxon Bio Status
5 3 
*Taxon Palatibility
6 4 
*Tier
inputs/NVS/TaxonOccurrence.Understory/map.csv
3 3 
Plot,locationName,,
4 4 
Sub Plot,subplot,,
5 5 
Method Name,*Method Name,,
6 
Species Code,*Species Code,,
6 
Species Code,authorTaxonCode,/_alt/2,
7 7 
Species Name,specificEpithet,,
8 
Verbatim Code,*Verbatim Code,,
8 
Verbatim Code,authorTaxonCode,/_alt/1,
9 9 
Taxon Bio Status,*Taxon Bio Status,,
10 10 
Taxon Palatibility,*Taxon Palatibility,,
11 11 
Taxon Growth Form,growthForm,"/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
inputs/NVS/TaxonOccurrence.Understory/VegBIEN.csv
9 9 
Plot,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/then",
10 10 
Sub Plot,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode/_if[@name=""if subplot""]/cond/_first/2",
11 11 
Plot,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
12 
Verbatim Code,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_if[@name=""if individual""]/else/_alt/1",
13 
Species Code,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_if[@name=""if individual""]/else/_alt/2",
12 14 
Taxon Growth Form,"/location/locationevent/taxonoccurrence/growthform/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
13 15 
Species Name,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
14 16 
Species Name,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
......
21 23 
Method Name,,** No join mapping for *Method Name **
22 24 
Parent Plot Obs ID,,** No join mapping for *Parent Plot Obs ID **
23 25 
Sample Method ID,,** No join mapping for *Sample Method ID **
24 
Species Code,,** No join mapping for *Species Code **
25 26 
Taxon Bio Status,,** No join mapping for *Taxon Bio Status **
26 27 
Taxon Palatibility,,** No join mapping for *Taxon Palatibility **
27 28 
Tier,,** No join mapping for *Tier **
28 29 
Tier Description,,** No join mapping for *Tier Description **
29 30 
Tier ID,,** No join mapping for *Tier ID **
30 31 
Value,,** No join mapping for *Value **
31 
Verbatim Code,,** No join mapping for *Verbatim Code **
inputs/NVS/TaxonOccurrence.Understory/test.xml.ref
12 12 
                        <locationevent>
13 13 
                            <project_id><project><projectname>$Project Abbreviation</projectname></project></project_id>
14 14 
                            <taxonoccurrence>
15 
                                <authortaxoncode>
16 
                                    <_alt>
17 
                                        <1>$Verbatim Code</1>
18 
                                        <2>$Species Code</2>
19 
                                    </_alt>
20 
                                </authortaxoncode>
15 21 
                                <growthform>
16 22 
                                    <_map>
17 23 
                                        <Graminoid>grass</Graminoid>
......
84 90 
        </path>
85 91 
    </_setDefault>
86 92 
</VegBIEN>
87 
Inserted 17 new rows into database
93 
Inserted 18 new rows into database
inputs/NVS/TaxonOccurrence.Understory/new_terms.csv
1 1 
Project Abbreviation,projectName,,
2 2 
Plot,locationName,,
3 
Species Code,authorTaxonCode,/_alt/2,
4 
Verbatim Code,authorTaxonCode,/_alt/1,
3 5 
Taxon Growth Form,growthForm,"/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
4 6 
Taxon Obs Note,taxonRemarks,,
inputs/NVS/TaxonOccurrence.Understory/unmapped_terms.csv
1 1 
*Method Name
2 
*Species Code
3 
*Verbatim Code
4 2 
*Taxon Bio Status
5 3 
*Taxon Palatibility
6 4 
*Tier
inputs/NVS/TaxonOccurrence/map.csv
3 3 
Plot,locationName,,
4 4 
Sub Plot,subplot,,
5 5 
Method Name,*Method Name,,
6 
Species Code,*Species Code,,
6 
Species Code,authorTaxonCode,/_alt/2,
7 7 
Species Name,specificEpithet,,
8 
Verbatim Code,*Verbatim Code,,
8 
Verbatim Code,authorTaxonCode,/_alt/1,
9 9 
Taxon Bio Status,*Taxon Bio Status,,
10 10 
Taxon Palatibility,*Taxon Palatibility,,
11 11 
Taxon Growth Form,growthForm,"/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
inputs/NVS/TaxonOccurrence/VegBIEN.csv
9 9 
Plot,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/then",
10 10 
Sub Plot,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode/_if[@name=""if subplot""]/cond/_first/2",
11 11 
Plot,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
12 
Verbatim Code,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_if[@name=""if individual""]/else/_alt/1",
13 
Species Code,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_if[@name=""if individual""]/else/_alt/2",
12 14 
Taxon Growth Form,"/location/locationevent/taxonoccurrence/growthform/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
13 15 
Species Name,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
14 16 
Species Name,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
......
21 23 
Herbivore,,** No join mapping for *Herbivore **
22 24 
Method Name,,** No join mapping for *Method Name **
23 25 
Severity,,** No join mapping for *Severity **
24 
Species Code,,** No join mapping for *Species Code **
25 26 
Taxon Bio Status,,** No join mapping for *Taxon Bio Status **
26 27 
Taxon Palatibility,,** No join mapping for *Taxon Palatibility **
27 
Verbatim Code,,** No join mapping for *Verbatim Code **
inputs/NVS/TaxonOccurrence/test.xml.ref
12 12 
                        <locationevent>
13 13 
                            <project_id><project><projectname>$Project Abbreviation</projectname></project></project_id>
14 14 
                            <taxonoccurrence>
15 
                                <authortaxoncode>
16 
                                    <_alt>
17 
                                        <1>$Verbatim Code</1>
18 
                                        <2>$Species Code</2>
19 
                                    </_alt>
20 
                                </authortaxoncode>
15 21 
                                <growthform>
16 22 
                                    <_map>
17 23 
                                        <Graminoid>grass</Graminoid>
......
84 90 
        </path>
85 91 
    </_setDefault>
86 92 
</VegBIEN>
87 
Inserted 17 new rows into database
93 
Inserted 18 new rows into database
inputs/NVS/TaxonOccurrence/new_terms.csv
1 1 
Project Abbreviation,projectName,,
2 2 
Plot,locationName,,
3 
Species Code,authorTaxonCode,/_alt/2,
4 
Verbatim Code,authorTaxonCode,/_alt/1,
3 5 
Taxon Growth Form,growthForm,"/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
4 6 
Taxon Obs Note,taxonRemarks,,
inputs/NVS/TaxonOccurrence/unmapped_terms.csv
1 1 
*Method Name
2 
*Species Code
3 
*Verbatim Code
4 2 
*Taxon Bio Status
5 3 
*Taxon Palatibility
6 4 
*Herbivore
inputs/NVS/StemObservation/map.csv
3 3 
Plot,locationName,,
4 4 
Sub Plot,subplot,,
5 5 
Method Name,*Method Name,,
6 
Identifier,*Identifier,,
7 
Species Code,*Species Code,,
6 
Identifier,tag,,
7 
Species Code,authorTaxonCode,,
8 8 
Species Name,specificEpithet,,
9 
Verbatim Code,*Verbatim Code,,
9 
Verbatim Code,authorStemCode,,
10 10 
Taxon Bio Status,*Taxon Bio Status,,
11 11 
Taxon Palatibility,*Taxon Palatibility,,
12 12 
Taxon Growth Form,growthForm,"/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
......
22 22 
Height,height_m,,Height Units is always m
23 23 
Height Units,*Height Units,,
24 24 
Item Obs Note,*Item Obs Note,,
25 
Item Obs ID,stemID,,
26 
Item ID,tag,,
25 
Item Obs ID,individualObservationID,,
26 
Item ID,individualID,,
27 27 
Parent Plot Obs ID,*Parent Plot Obs ID,,
28 28 
Sample Method ID,*Sample Method ID,,
inputs/NVS/StemObservation/VegBIEN.csv
3 3 
Plot,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/1",
4 4 
Plot,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
5 5 
Sub Plot,/location/authorlocationcode,
6 
Item ID,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
7 
Item Obs ID,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
6 8 
Project Abbreviation,/location/locationevent/*_id/project/projectname,
7 9 
Sub Plot,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists",
8 10 
Sub Plot,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/cond/_first/2",
9 11 
Plot,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/then",
10 12 
Sub Plot,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode/_if[@name=""if subplot""]/cond/_first/2",
13 
Item Obs ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode/_first/1,
14 
Item ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode/_first/2,
15 
Verbatim Code,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/authorstemcode,
11 16 
Diameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight_m/_cm_to_m/value,Units is always cm
12 17 
Height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height_m,Height Units is always m
13 
Item Obs ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/sourceaccessioncode,
14 
Item ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/tag,
18 
Identifier,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/tag,
15 19 
Plot,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
20 
Item ID,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_if[@name=""if individual""]/cond/_exists",
16 21 
Item Obs ID,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_if[@name=""if individual""]/cond/_exists",
17 
Item ID,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/2",
22 
Species Code,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_if[@name=""if individual""]/else",
23 
Identifier,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/2",
18 24 
Taxon Growth Form,"/location/locationevent/taxonoccurrence/growthform/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
25 
Item ID,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
26 
Item Obs ID,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
27 
Item Obs ID,"/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/2/_if[@name=""if organism in AggregateOccurrence""]/else/_first/1",
28 
Item ID,"/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/2/_if[@name=""if organism in AggregateOccurrence""]/else/_first/2",
19 29 
Species Name,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
20 30 
Species Name,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
21 31 
Species Name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1,
......
27 37 
Association,,** No join mapping for *Association **
28 38 
Association No,,** No join mapping for *Association No **
29 39 
Height Units,,** No join mapping for *Height Units **
30 
Identifier,,** No join mapping for *Identifier **
31 40 
Item Obs Note,,** No join mapping for *Item Obs Note **
32 41 
LD Units,,** No join mapping for *LD Units **
33 42 
Lean Angle,,** No join mapping for *Lean Angle **
......
36 45 
Parent Plot Obs ID,,** No join mapping for *Parent Plot Obs ID **
37 46 
Position,,** No join mapping for *Position **
38 47 
Sample Method ID,,** No join mapping for *Sample Method ID **
39 
Species Code,,** No join mapping for *Species Code **
40 48 
Taxon Bio Status,,** No join mapping for *Taxon Bio Status **
41 49 
Taxon Palatibility,,** No join mapping for *Taxon Palatibility **
42 50 
Units,,** No join mapping for *Units **
43 
Verbatim Code,,** No join mapping for *Verbatim Code **
inputs/NVS/StemObservation/test.xml.ref
14 14 
                            <taxonoccurrence>
15 15 
                                <aggregateoccurrence>
16 16 
                                    <plantobservation>
17 
                                        <sourceaccessioncode>$Item Obs ID</sourceaccessioncode>
17 18 
                                        <stemobservation>
19 
                                            <authorstemcode>$Verbatim Code</authorstemcode>
18 20 
                                            <diameterbreastheight_m><_cm_to_m><value>$Diameter</value></_cm_to_m></diameterbreastheight_m>
19 21 
                                            <height_m>$Height</height_m>
20 
                                            <sourceaccessioncode>$Item Obs ID</sourceaccessioncode>
21 
                                            <tag>$Item ID</tag>
22 
                                            <tag>$Identifier</tag>
22 23 
                                        </stemobservation>
23 24 
                                    </plantobservation>
24 25 
                                </aggregateoccurrence>
25 
                                <authortaxoncode>$Item ID</authortaxoncode>
26 
                                <authortaxoncode>$Identifier</authortaxoncode>
26 27 
                                <growthform>
27 28 
                                    <_map>
28 29 
                                        <Graminoid>grass</Graminoid>
......
32 33 
                                        <value>$Taxon Growth Form</value>
33 34 
                                    </_map>
34 35 
                                </growthform>
36 
                                <sourceaccessioncode>$Item Obs ID</sourceaccessioncode>
35 37 
                                <taxondetermination>
36 38 
                                    <taxonverbatim_id>
37 39 
                                        <taxonverbatim>
inputs/NVS/StemObservation/new_terms.csv
1 1 
Project Abbreviation,projectName,,
2 2 
Plot,locationName,,
3 
Identifier,tag,,
4 
Species Code,authorTaxonCode,,
5 
Verbatim Code,authorStemCode,,
3 6 
Taxon Growth Form,growthForm,"/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
4 7 
Diameter,diameterBreastHeight_cm,,Units is always cm
5 
Item Obs ID,stemID,,
6 
Item ID,tag,,
8 
Item Obs ID,individualObservationID,,
9 
Item ID,individualID,,
inputs/NVS/StemObservation/unmapped_terms.csv
1 1 
*Method Name
2 
*Identifier
3 
*Species Code
4 
*Verbatim Code
5 2 
*Taxon Bio Status
6 3 
*Taxon Palatibility
7 4 
*Association No
inputs/NVS/map.csv
1 1 
NVS,VegCore,Filter,Comments
2 2 
Altitude,elevationInMeters,,Altitude Units is always m
3 3 
Area,plotArea_m2,,Area Units is always m
4 
Identifier,tag,,
5 
Item ID,individualID,,
6 
Item Obs ID,individualObservationID,,
4 7 
Physiography,landform,,
5 8 
Plot,locationName,,
6 9 
Project Abbreviation,projectName,,
7 10 
Slope,slopeAspect,,
11 
Species Code,authorTaxonCode,,
8 12 
Taxon Growth Form,growthForm,"/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
9 13 
Taxon Obs Note,taxonRemarks,,
inputs/NVS/new_terms.csv
2 2 
Area,plotArea_m2,,Area Units is always m
3 3 
Datum,verbatimCoordinates,/_join/1,
4 4 
Diameter,diameterBreastHeight_cm,,Units is always cm
5 
Item ID,tag,,
6 
Item Obs ID,stemID,,
5 
Identifier,tag,,
6 
Item ID,individualID,,
7 
Item Obs ID,individualObservationID,,
7 8 
Physiography,landform,,
8 9 
Plot,locationName,,
9 10 
Precision,coordinateUncertaintyInMeters,,Units is always m
10 11 
Project Abbreviation,projectName,,
11 12 
Slope,slopeAspect,,
13 
Species Code,authorTaxonCode,,
14 
Species Code,authorTaxonCode,/_alt/2,
12 15 
Stop Date,projectEndDate,,
13 16 
Taxon Growth Form,growthForm,"/_map:[Graminoid=grass,Shrub=shrub,Tree=tree,Treefern=forb]/value",
14 17 
Taxon Obs Note,taxonRemarks,,
18 
Verbatim Code,authorStemCode,,
19 
Verbatim Code,authorTaxonCode,/_alt/1,
15 20 
XEast Long,verbatimCoordinates,"/_join/2/_label[label=""x""]/value",
16 21 
YNorth Lat,verbatimCoordinates,"/_join/3/_label[label=""y""]/value",

Also available in: Unified diff