"Calcio intercambiable (WSP S-5,10–cmolc/Kg–0.016)",calcium,,

"Carbón Orgánico (WSP S-9,10–%–0.06)",carbon,,

"Magnesio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)",magnesium,,

"Materia Orgánica (WSP S-9,10–%–0.1)",organic,,

"Potasio intercambiable (WSP S-5,10–cmolc/Kg–0.0053)",potassium,,

"Sodio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)",sodium,,

%cover,coverPercent,,

-----

-----"

1ha Plot Number,plotName,,

1ha Plot X Coordinate,organismX,,

1ha Plot Y Coordinate,organismY,,

Accession Number,occurrenceID,,

Accuracy,coordinateUncertaintyInMeters,,

Acidez intercambiable (ISRIC 11–cmolc/Kg–0.05),acidity,,

Addcoll,recordedBy,/_join/2,

AgeClass,lifeStage,,

Altitude,elevationInMeters,,"Assuming units are m based on the range of values [1] and the region the data is from (Madidi National Park) [2].

Arcilla (DIN 18 123–%–1),clay,,

Area,plotArea_ha,,"""0.1 ha transects"" (""Madidi Transects"" description in <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/BIEN2.datasources.xlsx>)"

Arena (DIN 18 123–%–2.5),sand,,

AuthorOfScientificName,scientificNameAuthorship,,

Autor (revised),scientificNameAuthorship,,

Barcode,catalogNumber,,

CIC (ISRIC 11–cmolc/Kg–0.05),cationExchangeCapacity,,

CatalogNO,catalogNumber,,

CatalogNumberNumeric,catalogNumber,/_alt/1,

Colldd,dayCollected,,

Collect Date,dateCollected,,

CollectionCD,collectionCode,,

CollectionDate,eventDate,,

Collmm,monthCollected,,

Collyy,yearCollected,,

Conductividad electrica (ASPT 6–µS/cm– 1 - 10000),conductivity,,

DateInfo,UNUSED,,

DetType,voucherType,,"Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."

Detby,identifiedBy,,

Determined by,identifiedBy,,

Detyy,yearIdentified,,

Diameter at 1.3m,diameterBreastHeight_cm,,"""Tree diameter measurement. {cm}"" (Diameter definition on p. 7 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"

Diameter,diameterBreastHeight_cm,,"""Tree diameter measurement. {cm}"" (Diameter definition on p. 7 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"

Diameter,diameterBreastHeight_cm,,Assuming units based on the range and precision of values

Direction,slopeAspect,/_alt/1,Part files provide either this field or Orientación

Ecology,habitat,,

Elev,elevationInMeters,,Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick.

Expedition name,projectName,,Consistent (globally unique) between PPM and PT data

Expedition number,projectID,,Consistent (globally unique) between PPM and PT data

Expedition,projectName,,

FROM ""Madidi"".""Plot""

FROM ""SALVIAS"".organisms

FROM ""SALVIAS-CSV"".organisms

Family (revised),family,,

Field family,verbatimFamily,,

Field name,verbatimGenus,,Often = Genera

First evaluation,eventDate,,

Format,preparations,,

Full Taxon Name,scientificName,,

Fósforo disponible (ISRIC 14-2–mg/Kg–1.5),phosphorus,,

GBIFFamilyOriginal,verbatimFamily,,

GBIFGenusOriginal,verbatimGenus,,

GROUP BY ""Altitude""::real , ""Locality""

GROUP BY ""Minimum altitude"" , ""Locality""

GROUP BY ""PLOT_ID"", subplot

GROUP BY ""PlotID"", ""Line""

Gazetteer,verbatimLocality,"/_join/1/_label[label=""gazetteer""]/value/_join/1",

GenBankNum,associatedSequences,"/_label[label=""GenBank""]/value",

Genera,genus,,

GeorefMethod,georeferenceProtocol,,

HAVING count(DISTINCT census_date) > 1

HorizontalDatum,UNUSED,,

IdentificationModifier,identificationQualifier,,

Ind,recordNumber,,"Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot."

Index collector,recordedBy,,

InfraSpecificLevel,UNUSED,,

InstitutionCD,institutionCode,,

Inventory code,locationID,,

Inventory name,plotName,,

LastDateModified,dcterms:modified,,

Lat (-=S),verbatimLatitude,"/_replace:[""\?$""=]/value",

Lat,decimalLatitude,,

LatDec,decimalLatitude,,

LatLongComments,georeferenceRemarks,,

LatestDateCollected,dateCollected,,

Latitude (DMS),verbatimLatitude,,

Liana presence,lianaInfestation,,

Limo (DIN 18 123–%–1),silt,,

Line,subplot,,

Locality description,communityName,,Often begins with the text in Vegetation type

Locality_Description,locality,,"Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX"

Locnotes,verbatimLocality,/_join/2,

Long (-=W),verbatimLongitude,"/_replace:[""\?$""=]/value",

Long,decimalLongitude,,

LongDec,decimalLongitude,,

Longitude (DMS),verbatimLongitude,,

MajorGeo,continent,,

MaximumElevationInMeter,maximumElevationInMeters,,

MeasDay,dayCollected,,

MeasMon,monthCollected,,

MeasYear,yearCollected,,

MeasureID,individualID,,

Method,samplingProtocol,,

Minimum altitude,verbatimElevation_m,,"This is a range [1], not a minimum. Assuming units are m based on the range of values [1] and the region the data is from (Madidi National Park) [2].

MinimumElevationInMeter,minimumElevationInMeters,,

Name,plotName,,

Names of Collectors,recordedBy,,

Newgazett,verbatimLocality,"/_join/1/_label[label=""gazetteer""]/value/_join/2",Only used in 1 row

Nitrógeno total (ISRIC 6–%–0.0014),nitrogen,,

NoInd,individualCount,,"Brad: This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this."

NoInd,stemCount,,

Number of subplot,subplot,,

Number,recordNumber,,

OBSERVATION_ID,individualID,,"Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later."

ORDER BY ""Altitude""::real DESC

Observaciones,plotNotes,,

Observation Date,eventDate,,

Observations,fieldNotes,,

Orientación/exposicion,slopeAspect,/_alt/2,Part files provide either this field or Direction

OrigFamily,verbatimFamily,,Brad: OMIT

OrigGenus,verbatimGenus,,

OrigSpecies,verbatimSpecificEpithet,,Brad: OMIT

OriginalCoordinateSystem,verbatimSRS,,

Phenology,reproductiveCondition,,

PlantFungusDescription,fieldNotes,"/_join/2/_label[label=""plant fungus""]/value",

PlotCD,locationID,,

PlotCode,plotName,,

PlotMethod,samplingProtocol,,

PlotObsID,individualID,,

PlotObsID,individualID,,"Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later."

PolDiv1,stateProvince,,Brad: No; pol1=stateProvince

Precip,precipitation,,

Prefix,UNUSED,,

Qualifier,identificationQualifier,,

RelatedCatalogedItems,relatedResourceID,/_alt/2,Used only when OtherCatalogNumbers is NULL

SELECT ""Altitude""::real, ""Locality""

SELECT ""Minimum altitude"", ""Locality""

SELECT ""PLOT_ID"", subplot, count(DISTINCT census_date) AS census_date_count

SELECT ""PlotID"", ""Line"", count(DISTINCT census_date) AS census_date_count

SELECT count(*) FROM ""SpeciesLink"".specimens

SciName,scientificName,,

ScientificNameOriginal,verbatimScientificName,,

SeriesName,collectionCode,,

Site Name,projectName,,

SiteCode,plotName,,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project)

SizeOfSite,plotArea_ha,,"""Size in hectares"" (SizeOfSite comments in <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/CTFS/_src/ctfs-comments_worksheet.xls>)"

Slope,slopeGradient,,

SourceVoucher,catalogNumber,/_alt/2,"Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below."

Spatial Method,samplingProtocol,,

Specie+autor,scientificNameWithAuthorship,,

Species and morphotypes,scientificName,,"Contains less than ""Specie+autor"""

SpeciesAuthority,scientificNameAuthorship,,

Specimen,catalogNumber,,

Subplot Number,subplot,,

Substrate,locality,"/_join/2/_label[label=""substrate""]/value",

Suffix,UNUSED,,

Tag number,tag,,

Temp,temperature,,

Textural class,texture,,

TimeCollected,eventTime,,

Tissues,UNUSED,,

Topographical situation,landform,,

Total height,height,,

Tree Number,tag,,

Tree number,recordNumber,,

TreeTag,tag,,

Trunk,authorStemCode,,

Typology,typeStatus,,

UniqueNYInternalRecordNumber,occurrenceID,,

Vegetation type,communityID,,

Vegetation,locality,"/_join/3/_label[label=""vegetation""]/value",

VerbatimCollectingDate,dateCollected,/_alt/0,

WHERE ""Altitude"" IS NOT NULL AND ""Altitude"" != ' 1430'

WHERE ""Line"" IS NOT NULL AND census_date IS NOT NULL

WHERE ""Minimum altitude"" IS NOT NULL

WHERE COALESCE(""dwc_curatorial_FieldNumber"", ""dwc_terms_fieldNumber"", ""conceptual_darwin_2003_1_0_FieldNumber"") != ""dwc_terms_recordNumber""

WHERE subplot IS NOT NULL AND census_date IS NOT NULL

[1] Using the following query:

[2] This map shows both flat and mountainous regions: <https://maps.google.com/maps/ms?ie=UTF8&hl=en&t=h&msa=0&msid=103363035880599665829.00047e9cf84b87448387d&ll=-13.96448,-68.380065&spn=3.730927,4.669189&z=7>"

accession,occurrenceID,,

accession_number,occurrenceID,,

acronym,collectionCode,,

area,plotArea_m2,,"""Total area of the plot in m2"" (area definition at <http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename>)"

area|country|territory,country,,

auth,scientificNameAuthorship,,Brad: This is the author of the scientificName.

authorplantname,verbatimScientificName,,

authorplotcode,plotName,,

authors,scientificNameAuthorship,,

basal_diam,basalDiameter,,

campus,fieldNotes,"/_join/5/_label[label=""campus""]/value",

census_date,eventDate,,"This is for the subplot, not the organism, as all organisms in a subplot have the same value for it. The following query returns no rows:

census_no,censusNumber,,"Brad: Assigned by SALVIAS. 1 for first plot, then 2, 3, etc. I can't recall if we even have repeat censuses in SALVIAS. Probably not."

cf,identificationQualifier,,

cf_aff,identificationQualifier,,"Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank."

cfaff,identificationQualifier,,"Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank."

clay_percent,clay,"/_units:[default=""%"",to=]/value",

coll_day,dayCollected,,

coll_firstname,recordedBy.givenName,,Brad: See comment above

coll_lastname,recordedBy.surName,,"Brad: This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."

coll_month,monthCollected,,

coll_number,catalogNumber,/_alt/1,Brad: Map instead as for voucher_string

coll_year,yearCollected,,

collday,dayCollected,,

collectiondate,dateCollected,,

collectno,recordNumber,,

collector1,recordedBy,/_join/2,

collector2,recordedBy,/_join/3,

collector3,recordedBy,/_join/4,

collmonth,monthCollected,,

collyear,yearCollected,,

comment1,fieldNotes,/_join/1,

comment2,fieldNotes,/_join/2,

comment3,fieldNotes,/_join/3,

comment4,fieldNotes,/_join/4,

conceptual_darwin_2003_1_0_BasisOfRecord,basisOfRecord,,

conceptual_darwin_2003_1_0_BoundingBox,footprintWKT,,

conceptual_darwin_2003_1_0_CatalogNumber,catalogNumber,,

conceptual_darwin_2003_1_0_Class,class,,

conceptual_darwin_2003_1_0_CollectionCode,collectionCode,,

conceptual_darwin_2003_1_0_Collector,recordedBy,,

conceptual_darwin_2003_1_0_CollectorNumber,recordNumber,/_alt/3,

conceptual_darwin_2003_1_0_ContinentOcean,continent,,

conceptual_darwin_2003_1_0_CoordinatePrecision,coordinatePrecision,,

conceptual_darwin_2003_1_0_Country,country,,

conceptual_darwin_2003_1_0_County,county,,

conceptual_darwin_2003_1_0_DateLastModified,dcterms:modified,,

conceptual_darwin_2003_1_0_DayCollected,dayCollected,,

conceptual_darwin_2003_1_0_DayIdentified,dayIdentified,,

conceptual_darwin_2003_1_0_Family,family,,

conceptual_darwin_2003_1_0_FieldNumber,recordNumber,/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec)

conceptual_darwin_2003_1_0_Genus,genus,,

conceptual_darwin_2003_1_0_IdentifiedBy,identifiedBy,,

conceptual_darwin_2003_1_0_IndividualCount,individualCount,,

conceptual_darwin_2003_1_0_InstitutionCode,institutionCode,,

conceptual_darwin_2003_1_0_JulianDay,day,/_alt/1,

conceptual_darwin_2003_1_0_Kingdom,kingdom,,

conceptual_darwin_2003_1_0_Latitude,verbatimLatitude,,

conceptual_darwin_2003_1_0_Locality,locality,,

conceptual_darwin_2003_1_0_Longitude,verbatimLongitude,,

conceptual_darwin_2003_1_0_MaximumDepth,maximumDepthInMeters,,

conceptual_darwin_2003_1_0_MaximumElevation,maximumElevationInMeters,,

conceptual_darwin_2003_1_0_MinimumDepth,minimumDepthInMeters,,

conceptual_darwin_2003_1_0_MinimumElevation,minimumElevationInMeters,,

conceptual_darwin_2003_1_0_MonthCollected,monthCollected,,

conceptual_darwin_2003_1_0_MonthIdentified,monthIdentified,,

conceptual_darwin_2003_1_0_Notes,fieldNotes,,

conceptual_darwin_2003_1_0_Order,order,,

conceptual_darwin_2003_1_0_Phylum,phylum,,

conceptual_darwin_2003_1_0_PreparationType,preparations,,

conceptual_darwin_2003_1_0_PreviousCatalogNumber,otherCatalogNumbers,,

conceptual_darwin_2003_1_0_RelatedCatalogItem,relatedResourceID,,

conceptual_darwin_2003_1_0_RelationshipType,relationshipOfResource,,

conceptual_darwin_2003_1_0_ScientificName,scientificName,,

conceptual_darwin_2003_1_0_ScientificNameAuthor,scientificNameAuthorship,/_alt/2,

conceptual_darwin_2003_1_0_Sex,sex,,

conceptual_darwin_2003_1_0_Species,specificEpithet,,

conceptual_darwin_2003_1_0_StateProvince,stateProvince,,

conceptual_darwin_2003_1_0_Subspecies,subspecies,,

conceptual_darwin_2003_1_0_TimeOfDay,eventTime,,

conceptual_darwin_2003_1_0_TypeStatus,typeStatus,,

conceptual_darwin_2003_1_0_YearCollected,yearCollected,,

conceptual_darwin_2003_1_0_YearIdentified,yearIdentified,,

convertednotes,fieldNotes,,

currentTaxonName sec Weakley 2006,scientificName,,

darwin:BasisOfRecord,basisOfRecord,,

darwin:CatalogNumber,catalogNumber,,

darwin:Class,class,,

darwin:CollectionCode,collectionCode,,

darwin:Collector,recordedBy,,

darwin:CollectorNumber,recordNumber,,

darwin:ContinentOcean,continent,,

darwin:CoordinatePrecision,coordinatePrecision,,

darwin:Country,country,,

darwin:County,county,,

darwin:DateLastModified,dcterms:modified,,

darwin:DayCollected,dayCollected,,

darwin:DayIdentified,dayIdentified,,

darwin:Family,family,,

darwin:FieldNumber,UNUSED,,"`grep -F ""<darwin:FieldNumber>"" inputs/XAL/src/digir.specimens.xml` returns no lines. This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber)."

darwin:Genus,genus,,

darwin:IdentifiedBy,identifiedBy,,

darwin:IndividualCount,individualCount,,

darwin:InstitutionCode,institutionCode,,

darwin:JulianDay,day,,

darwin:Kingdom,kingdom,,

darwin:Latitude,verbatimLatitude,,

darwin:Locality,locality,,

darwin:Longitude,verbatimLongitude,,

darwin:MaximumDepth,maximumDepthInMeters,,

darwin:MaximumElevation,maximumElevationInMeters,,

darwin:MinimumDepth,minimumDepthInMeters,,

darwin:MinimumElevation,minimumElevationInMeters,,

darwin:MonthCollected,monthCollected,,

darwin:MonthIdentified,monthIdentified,,

darwin:Notes,fieldNotes,,

darwin:Order,order,,

darwin:Phylum,phylum,,

darwin:PreparationType,preparations,,

darwin:PreviousCatalogNumber,otherCatalogNumbers,,

darwin:RelatedCatalogItem,relatedResourceID,,

darwin:RelationshipType,relationshipOfResource,,

darwin:ScientificName,scientificName,,

darwin:ScientificNameAuthor,scientificNameAuthorship,,

darwin:Sex,sex,,

darwin:Species,specificEpithet,,

darwin:StateProvince,stateProvince,,

darwin:Subspecies,subspecies,,

darwin:TimeOfDay,eventTime,,

darwin:TypeStatus,typeStatus,,

darwin:YearCollected,yearCollected,,

darwin:YearIdentified,yearIdentified,,

date_finish,endDate,,

date_start,startDate,,

det_type,voucherType,,"Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."

dwc_curatorial_CollectorNumber,recordNumber,/_alt/3,

dwc_curatorial_FieldNumber,recordNumber,/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec)

dwc_curatorial_IdentifiedBy,identifiedBy,,

dwc_curatorial_IndividualCount,individualCount,,

dwc_curatorial_TypeStatus,typeStatus,,

dwc_dwcore_AuthorYearOfScientificName,scientificNameAuthorship,/_alt/3,

dwc_dwcore_BasisOfRecord,basisOfRecord,,

dwc_dwcore_CatalogNumber,catalogNumber,,

dwc_dwcore_Class,class,,

dwc_dwcore_CollectionCode,collectionCode,,

dwc_dwcore_Collector,recordedBy,,

dwc_dwcore_Continent,continent,,

dwc_dwcore_Country,country,,

dwc_dwcore_County,county,,

dwc_dwcore_DateLastModified,dcterms:modified,,

dwc_dwcore_DayOfYear,day,/_alt/2,

dwc_dwcore_Family,family,,

dwc_dwcore_Genus,genus,,

dwc_dwcore_GlobalUniqueIdentifier,occurrenceID,,

dwc_dwcore_InfraspecificEpithet,infraspecificEpithet,,

dwc_dwcore_InstitutionCode,institutionCode,,

dwc_dwcore_Kingdom,kingdom,,

dwc_dwcore_Locality,locality,,

dwc_dwcore_MaximumDepthInMeters,maximumDepthInMeters,,

dwc_dwcore_MaximumElevationInMeters,maximumElevationInMeters,,

dwc_dwcore_MinimumDepthInMeters,minimumDepthInMeters,,

dwc_dwcore_MinimumElevationInMeters,minimumElevationInMeters,,

dwc_dwcore_Order,order,,

dwc_dwcore_Phylum,phylum,,

dwc_dwcore_Remarks,taxonRemarks,,

dwc_dwcore_ScientificName,scientificName,,

dwc_dwcore_Sex,sex,,

dwc_dwcore_SpecificEpithet,specificEpithet,,

dwc_dwcore_StateProvince,stateProvince,,

dwc_geospatial_DecimalLatitude,decimalLatitude,,

dwc_geospatial_DecimalLongitude,decimalLongitude,,

dwc_geospatial_VerbatimLatitude,verbatimLatitude,,

dwc_geospatial_VerbatimLongitude,verbatimLongitude,,

dwc_terms_basisOfRecord,basisOfRecord,,

dwc_terms_catalogNumber,catalogNumber,,

dwc_terms_class,class,,

dwc_terms_collectionCode,collectionCode,,

dwc_terms_collectionID,collectionID,,

dwc_terms_continent,continent,,

dwc_terms_coordinateUncertaintyInMeters,coordinateUncertaintyInMeters,,

dwc_terms_country,country,,

dwc_terms_county,county,,

dwc_terms_dateIdentified,dateIdentified,,

dwc_terms_day,day,,

dwc_terms_decimalLatitude,decimalLatitude,,

dwc_terms_decimalLongitude,decimalLongitude,,

dwc_terms_endDayOfYear,endDayOfYear,,

dwc_terms_eventTime,eventTime,,

dwc_terms_family,family,,

dwc_terms_fieldNumber,recordNumber,/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec)

dwc_terms_genus,genus,,

dwc_terms_identifiedBy,identifiedBy,,

dwc_terms_individualCount,individualCount,,

dwc_terms_infraspecificEpithet,infraspecificEpithet,,

dwc_terms_institutionCode,institutionCode,,

dwc_terms_kingdom,kingdom,,

dwc_terms_locality,locality,,

dwc_terms_maximumDepthInMeters,maximumDepthInMeters,,

dwc_terms_maximumElevationInMeters,maximumElevationInMeters,,

dwc_terms_minimumDepthInMeters,minimumDepthInMeters,,

dwc_terms_minimumElevationInMeters,minimumElevationInMeters,,

dwc_terms_month,month,,

dwc_terms_occurrenceRemarks,occurrenceRemarks,,

dwc_terms_order,order,,

dwc_terms_otherCatalogNumbers,otherCatalogNumbers,,

dwc_terms_phylum,phylum,,

dwc_terms_preparations,preparations,,

dwc_terms_recordNumber,recordNumber,/_alt/1,

dwc_terms_recordedBy,recordedBy,,

dwc_terms_scientificName,scientificName,,

dwc_terms_scientificNameAuthorship,scientificNameAuthorship,/_alt/1,

dwc_terms_sex,sex,,

dwc_terms_specificEpithet,specificEpithet,,

dwc_terms_startDayOfYear,startDayOfYear,,

dwc_terms_stateProvince,stateProvince,,

dwc_terms_typeStatus,typeStatus,,

dwc_terms_verbatimLatitude,verbatimLatitude,,

dwc_terms_verbatimLongitude,verbatimLongitude,,

dwc_terms_year,year,,

elev_m,elevationInMeters,,Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick.

elev_max_m,maximumElevationInMeters,,

elev_min_m,minimumElevationInMeters,,

elevationrange,UNUSED,,

exchangecapacity,cationExchangeCapacity,,

flower,reproductiveCondition,"/_map:[A=*,I=*,M=*]/value","Main values are A, I, and M. What do they mean?"

fruit,reproductiveCondition,"/_map:[A=*,I=*,M=*]/value","Main values are A, I, and M. What do they mean?"

gentry_dbh,diameterBreastHeightGentry,,

height_m,height,,

height_m,height,/_alt/2,

herbarium,institutionCode,,

holdridge_life_zone,communityID,,

ht_first_branch_m,heightFirstBranch,,

http__purl_org_dc_terms_modified,dcterms:modified,,

individual_code,recordNumber,,"Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot."

infra_ep_1,infraspecificEpithet,,

infra_rank_1,taxonRank,,

infraname,infraspecificEpithet,,

infrarank,taxonRank,/_alt/2,

inorout,fieldNotes,"/_join/7/_label[label=""in or out""]/value",

interpretationdate,dateIdentified,,

key,OMIT,,UniqueNYInternalRecordNumber is a better pkey

lat_decimal,decimalLatitude,,

lat_deg,verbatimLatitude,,

leaves,reproductiveCondition,"/_map:[A=*,I=*,M=*]/value","Main values are A, I, and M. What do they mean?"

life_zone,communityName,,

life_zone_code,communityID,,

life_zone_code,communityName,,

loanto,fieldNotes,"/_join/6/_label[label=""loaned to""]/value",

locality_description,locality,,"Brad: No; this is free text description of locality where plot was situated, same as for DwC. Not a description of vegetation. Most likely='namedPlace.placeDescription' in VB; not sure about VX, again need to ask Nick where locality descriptions live in VX"

locationAccuracy-m,coordinateUncertaintyInMeters,,

locationaccuracy,coordinateUncertaintyInMeters,,

long_decimal,decimalLongitude,,

long_deg,verbatimLongitude,,

major_geo,continent,,

methodnarrative,samplingProtocol,,

museumaccessionnumber,catalogNumber,,

no_of_individuals,individualCount,,"Brad: This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this."

obsStartDate,startDate,,

obsenddate,endDate,,

observation_id,eventID,,

obsstartdate,startDate,,

organic_percent,organic,"/_units:[default=""%"",to=]/value",

orig_family,verbatimFamily,,Brad: OMIT

orig_species,verbatimSpecificEpithet,,Brad: OMIT

pH acuoso (ISRIC 4–– 1 - 14),ph,,

parent_id,parentLocationID,,

plot_code,plotName,,

plot_code,plotName,,Brad: plotCode is as-assigned by data provider; guranteed to be unique only within dataset (=project)

plot_methodology,samplingProtocol,,

pol1,stateProvince,,Brad: No; pol1=stateProvince

pol2,county,,Brad: No pol2=countyParish

precip_mm,precipitation,,

project,projectName,,

publicLatitude,decimalLatitude,,

publicLongitude,decimalLongitude,,

region|state|province,stateProvince,,

root,reproductiveCondition,"/_map:[A=*,I=*,M=*]/value","Main values are A, I, and M. What do they mean?"

sand_percent,sand,"/_units:[default=""%"",to=]/value",

shape,footprintWKT,,

sheetno,associatedMedia,,?

silt_percent,silt,"/_units:[default=""%"",to=]/value",

soil_C,carbon,"/_units:[default=""%"",to=]/value",

soil_Ca,calcium,"/_units:[default=""%"",to=]/value",

soil_K,potassium,"/_units:[default=""%"",to=]/value",

soil_Mg,magnesium,"/_units:[default=""%"",to=]/value",

soil_N,nitrogen,"/_units:[default=""%"",to=]/value",

soil_Na,sodium,"/_units:[default=""%"",to=]/value",

soil_P,phosphorus,"/_units:[default=""%"",to=]/value/_map:[""<1,5""=0,*=*]/value",

soil_acidity,acidity,"/_units:[default=""%"",to=]/value/_map:[""<0.05""=0,*=*]/value",

soil_base,baseSaturation,"/_units:[default=""%"",to=]/value",

soil_cation_cap,cationExchangeCapacity,,

soil_conductivity,conductivity,,

soil_texture,texture,"/_units:[default=""%"",to=]/value",

soil_texture,texture,,

soilclay,clay,,

soilorganic,organic,,

soilph,ph,,

soilsand,sand,,

soilsilt,silt,,

soiltexture,texture,,

specific_authority,scientificNameAuthorship,,Brad: This is the author of the scientificName.

stem_canopy_form,canopyForm,,

stem_canopy_position,canopyPosition,,

stem_dbh,diameterBreastHeight_cm,,"Assuming units based on the units for intercept_cm, which measures the same dimension"

stem_dbh,diameterBreastHeight_cm,,"Assuming units based on the units for plotObservations.intercept_cm, which measures the same dimension"

stem_height_first_branch_m,heightFirstBranch,,"Brad: Same as for ht_first_branch_m, but applies to individuals stems, not trees. Rare."

stem_height_m,height,,"Brad: Same as for height, but applies to individuals stems, not trees. Rare."

stem_height_m,height,/_alt/1,"Brad: Same as for height, but applies to individuals stems, not trees. Rare."

stem_liana_infestation,lianaInfestation,,

stem_tag1,tag,/_alt/1/_alt/2,"The second tag supercedes the first. The stem tag supercedes the tree tag. Brad: Same as tag1 & tag2, but applied to individual stems. I'm still not clear how to distinguish between methods which tag only individuals trees, and those which tag individual stems."

stem_tag1,tag,/_alt/2,"The second tag supercedes the first. Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once."

stem_tag2,tag,/_alt/1,"The second tag supercedes the first. Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."

stem_tag2,tag,/_alt/1/_alt/1,The second tag supercedes the first. The stem tag supercedes the tree tag. Brad: see above

tag1,tag,/_alt/2,"The second tag supercedes the first. Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once."

tag1,tag,/_alt/2/_alt/2,"The second tag supercedes the first. The stem tag supercedes the tree tag. Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once."

tag2,tag,/_alt/1,"The second tag supercedes the first. Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."

tag2,tag,/_alt/2/_alt/1,"The second tag supercedes the first. The stem tag supercedes the tree tag. Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."

taxonobservation_id,taxonOccurrenceID,,

temp_c,temperature,,

temp_dbh,diameterBreastHeight_cm,,"Assuming units based on the units for intercept_cm, which measures the same dimension"

usdaRank,taxonRank,/_alt/1,

voucher_string,catalogNumber,/_alt/2,"Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below."

x,organismX,,

x_position,organismX,,"Brad: These are important, fundamental values of many tree plots"

y,organismY,,

y_position,organismY,,Brad: See comment above for x_position