Project

General

Profile

1
bien_web,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
2
observationID,"/_if[@name=""if specimen""]/cond/_exists",
3
dataSourceName,"/_if[@name=""if specimen""]/else/source/shortname/_first/1",
4
observationType,"/_if[@name=""if specimen""]/else/source:[shortname/_first/2/_env:[name=source]]/observationtype",
5
plotCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/1",
6
plotID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/cond/_exists",
7
observationType,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/cond/_eq:[right=plot]/left",
8
observationID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/1",
9
observationID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
10
dataSourceName,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/then",
11
plotID,"/location/_if[@name=""if subplot""]/else/sourceaccessioncode/_if[@name=""if geovalidation""]/else",
12
plotCode,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
13
plotID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode",
14
plotAreaHa,/location/area_m2/_ha_to_m2/value,
15
elevation_m,/location/elevation_m/_alt/1,
16
collectionNumber,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
17
observationID,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
18
isCultivated,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/else/_alt/2",
19
plotMethod,/location/locationevent/*_id/method/name,
20
plotCode,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/then",
21
plotID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode/_if[@name=""if subplot""]/then",
22
observationDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1,
23
pctCover,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover_fraction/_percent_to_fraction/value,
24
collectionNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber,
25
observationID,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
26
dataSourceName,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/name",
27
dataSourceName,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/sourcename/name/_split:[separator="", ""]/value",
28
observationID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
29
plotCode,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
30
plotID,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
31
collectionNumber,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/1",
32
taxon,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/2",
33
collector,/location/locationevent/taxonoccurrence/collector_id/party/fullname,
34
collectionNumber,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
35
observationID,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
36
isCultivated,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/then/_alt/2",
37
observationID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3,
38
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname,
39
taxon,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/null/_first/2",
40
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value",
41
taxon,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/1",
42
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2",
43
species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
44
taxonAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/2",
45
species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
46
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
47
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
48
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
49
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
50
taxon,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/null/_first/2,
51
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value,
52
taxon,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/1,
53
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2,
54
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1,
55
taxonAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/2,
56
taxonAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/author,
57
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family,
58
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus,
59
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet,
60
taxon,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/taxonomicname,
61
latitude,"/location/locationplace/*_id/place/*_id/coordinates/latitude_deg/_nullIf:[null=0,type=float]/value",
62
longitude,"/location/locationplace/*_id/place/*_id/coordinates/longitude_deg/_nullIf:[null=0,type=float]/value",
63
country,/location/locationplace/*_id/place/country,
64
countyParish,/location/locationplace/*_id/place/county,
65
latitude,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/latitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
66
longitude,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/longitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
67
country,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/country/_first/2,
68
countyParish,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/county/_first/2,
69
stateProvince,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2,
70
stateProvince,/location/locationplace/*_id/place/stateprovince,
71
plotID,"/location/sourceaccessioncode/_if[@name=""if locationID""]/cond/_exists",
72
plotID,"/location/sourceaccessioncode/_if[@name=""if locationID""]/then/_if[@name=""if subplot""]/then/_join/1",
73
abund,,** No join mapping for *abund ** 
74
abund1,,** No join mapping for *abund1 ** 
75
abund10,,** No join mapping for *abund10 ** 
76
abund2.5,,** No join mapping for *abund2.5 ** 
77
acceptance,,** No join mapping for *acceptance ** 
78
acceptance_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
79
bien2_DBPlotID,,** No join mapping for *bien2_DBPlotID ** 
80
bien2_DBPlotID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
81
bien2_ObservationID,,** No join mapping for *bien2_ObservationID ** 
82
bien2_ObservationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
83
bien2_OccurID,,** No join mapping for *bien2_OccurID ** 
84
bien2_OccurID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
85
bien2_TraitObservationID,,** No join mapping for *bien2_TraitObservationID ** 
86
bien2_TraitObservationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
87
bien2_taxonomyID,,** No join mapping for *bien2_taxonomyID ** 
88
bien2_taxonomyID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
89
collector_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
90
countryError,,** No join mapping for *countryError ** 
91
country_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
92
dataSourceID,,** No join mapping for *dataSourceID ** 
93
dataSourceID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
94
dataSourceNamePrimary,,** No join mapping for *dataSourceNamePrimary ** 
95
dataSourceNamePrimary_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
96
dataSourceName_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
97
family_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
98
genus_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
99
higherPlantGroup,,** No join mapping for higherPlantGroup ** 
100
higherPlantGroup_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
101
identifiedBy_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
102
isCultivatedReason,,** No join mapping for cultivatedBasis ** 
103
isCultivatedReason_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
104
isCultivated_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
105
isGeovalid,,** No join mapping for *isGeovalid ** 
106
isGeovalid_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
107
isNewWorld,,** No join mapping for isNewWorld ** 
108
isNewWorld_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
109
isValidLatLong,,** No join mapping for *isValidLatLong ** 
110
isValidLatLong_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
111
localityDescription,,** No join mapping for *localityDescription ** 
112
observationID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
113
observationType_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
114
plotAreaHa_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
115
plotCode_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
116
plotID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
117
plotMethod_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
118
plotMinDbh,,** No join mapping for *plotMinDbh ** 
119
plotMinDbh_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
120
rank,,** No join mapping for *rank ** 
121
rank_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
122
species_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
123
stateProvinceError,,** No join mapping for *stateProvinceError ** 
124
stateProvince_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
125
taxonAuthor_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
126
taxonAuthorityVerbatim,,** No join mapping for *taxonAuthorityVerbatim ** 
127
taxonAuthorityVerbatim_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
128
taxonMorphospecies,,** No join mapping for scientificNameWithMorphospecies ** 
129
taxonMorphospecies_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
130
taxon_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
131
traitMethod,,** No join mapping for *traitMethod ** 
132
traitMethod_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
133
traitName,,** No join mapping for traitName ** 
134
traitName_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
135
traitUnit,,** No join mapping for *traitUnit ** 
136
traitUnit_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation
137
traitValue,,** No join mapping for *traitValue ** 
(2-2/7)