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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 7037 almost 12 years Aaron Marcuse-Kubitza backups/Makefile: Synchronization: %/download: ...
  bin 7095 almost 12 years Aaron Marcuse-Kubitza import_all: Make $import_source a local var, so...
  config 6321 about 12 years Aaron Marcuse-Kubitza Added config/bien_read_password
  inputs 7091 almost 12 years Aaron Marcuse-Kubitza mappings/VegCore.csv: Regenerated from wiki
  lib 7081 almost 12 years Aaron Marcuse-Kubitza lib/common.Makefile: $(subMake): Removed `--mak...
  mappings 7088 almost 12 years Aaron Marcuse-Kubitza mappings/VegCore.csv: Regenerated from wiki
  schemas 7097 almost 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: unscrubbed_taxondeterminat...
  to_do 4524 about 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 5971 about 12 years Aaron Marcuse-Kubitza Updated validation/BIEN2_Analytical_DB_overview...
Makefile 11.3 KB 7082 almost 12 years Aaron Marcuse-Kubitza root Makefile: Removed $(subMake), which is now...
README.TXT 16.5 KB 7090 almost 12 years Aaron Marcuse-Kubitza README.TXT: Testing: Added commands to put in ....
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 30.4 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
7097 01/07/2013 05:39 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: unscrubbed_taxondetermination_view: Use `SELECT source_id FROM source WHERE shortname = ...` instead of source_by_shortname() so that the source table is updated to point to the same schema as the view rather than pointing to whichever version (usually public) is first in the search_path
7096 01/07/2013 05:23 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: unscrubbed_taxondetermination_view: Fixed bug where need to include only those taxondeterminations that already have a match in TNRS.tnrs, to avoid adding empty TNRS taxondeterminations. As the concurrent tnrs daemon runs, these taxondeterminations will gradually acquire matches in tnrs and then be processed by scrub.
7095 01/07/2013 05:00 PM Aaron Marcuse-Kubitza

import_all: Make $import_source a local var, so it will be automatically unset if the script is aborted
7094 01/07/2013 04:49 PM Aaron Marcuse-Kubitza

vegbien_dest: Schema override for referring to a table in the $public schema: Only process the override when $!schemaVar and $!tableVar are non-*empty*, to allow setting $schema=""
7093 01/07/2013 04:47 PM Aaron Marcuse-Kubitza

schemas/Makefile: DDL generation: vegbien.sql: Unset $dump_opts so that pg_dump does not use env vars left after running import_all
7092 01/07/2013 04:44 PM Aaron Marcuse-Kubitza

schemas/Makefile: DDL generation: vegbien.sql: Unset $version so that pg_dump always uses the public schema, even after running import_all
7091 01/07/2013 04:13 PM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Regenerated from wiki
7090 01/07/2013 04:13 PM Aaron Marcuse-Kubitza

README.TXT: Testing: Added commands to put in .profile on a development machine
7089 01/07/2013 04:10 PM Aaron Marcuse-Kubitza

import_all: Added command to add scrubbed taxondeterminations
7088 01/07/2013 04:09 PM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Regenerated from wiki

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