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1 6742 aaronmk
CVS,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
2
museumAccessionNumber,"/_if[@name=""if specimen""]/cond/_exists",
3 6777 aaronmk
:plot,"/_if[@name=""if specimen""]/else/source:[shortname/_first/2/_env:[name=source]]/observationtype",
4 6758 aaronmk
:plot,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/cond/_eq:[right=plot]/left",
5 6756 aaronmk
museumAccessionNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists",
6
museumAccessionNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
7
museumAccessionNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/else",
8 6742 aaronmk
TAXONOBSERVATION_ID,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
9
OBSERVATION_ID,"/location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode",
10
OBSERVATION_ID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/cond/_exists",
11
OBSERVATION_ID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/sourceaccessioncode",
12
collectionDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1,
13
notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
14
museumAccessionNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
15 6791 aaronmk
museumAccessionNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
16 6742 aaronmk
stemLocation_ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/sourceaccessioncode,
17 6992 aaronmk
OBSERVATION_ID,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
18 6999 aaronmk
stemLocation_ID,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_if[@name=""if individual""]/cond/_exists",
19 6992 aaronmk
authorPlantName,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/1",
20
plantNameWithAuthority,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/2",
21
plantname,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/3",
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givenName,/location/locationevent/taxonoccurrence/collector_id/party/fullname/_join_words/1,
23
surName,/location/locationevent/taxonoccurrence/collector_id/party/fullname/_join_words/2,
24
TAXONOBSERVATION_ID,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
25
TAXONOBSERVATION_ID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1,
26
interpretationDate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/creationdate/_alt/1/_dateRangeStart/value,
27 6803 aaronmk
taxonLevel,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/rank",
28 6816 aaronmk
variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=variety]/taxonepithet",
29
subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=subspecies]/taxonepithet/_alt/2",
30 6808 aaronmk
denorm_species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet/_alt/1",
31 6816 aaronmk
species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet/_alt/2",
32 6808 aaronmk
denorm_genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_alt/1",
33 6816 aaronmk
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_alt/2",
34 6808 aaronmk
denorm_genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet/_alt/1",
35 6816 aaronmk
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet/_alt/2",
36 6808 aaronmk
denorm_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_alt/1",
37 6816 aaronmk
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_alt/2",
38 6808 aaronmk
denorm_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet/_alt/1",
39 6816 aaronmk
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet/_alt/2",
40 6808 aaronmk
Order,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=order]/taxonepithet/_alt/2",
41
Class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=class]/taxonepithet/_alt/2",
42
denorm_kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=kingdom]/taxonepithet/_alt/1",
43
Kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=kingdom]/taxonepithet/_alt/2",
44 6803 aaronmk
taxonLevel,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/rank,
45
taxonLevel,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonepithet/_if[@name=""if taxonomic name is epithet""]/cond/_alt:[2=true]/1/_taxonomic_name_is_epithet/rank",
46 7142 aaronmk
denorm_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family/_alt/1,
47
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family/_alt/2,
48
plantNameWithAuthority,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/1,
49
plantname,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/1,
50
denorm_genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2/_alt/1,
51
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2/_alt/2,
52
denorm_species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1/_alt/1,
53
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1/_alt/2,
54
subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/4/_alt/2,
55
taxonLevel,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
56
variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/6/_join_words:[1=""var. ""]/2",
57 6808 aaronmk
denorm_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family/_alt/1,
58 6816 aaronmk
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family/_alt/2,
59 6808 aaronmk
denorm_genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus/_alt/1,
60 6816 aaronmk
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus/_alt/2,
61 6808 aaronmk
denorm_species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet/_alt/1,
62 6816 aaronmk
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet/_alt/2,
63 6817 aaronmk
plantname,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/taxonname,
64
plantNameWithAuthority,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/taxonomicname,
65 6803 aaronmk
taxonLevel,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/verbatimrank,
66 7157 aaronmk
TAXONOBSERVATION_ID,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/_if[@name=""if has taxondetermination""]/cond/_exists",
67 6742 aaronmk
interpretationDate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_dateRangeStart/value,
68
taxonFit,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
69
authorPlantName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonverbatim/taxonname,
70
museumAccessionNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
71 6808 aaronmk
Division,,** No join mapping for *Division/_alt/2 **
72 6742 aaronmk
PARTY_ID,,** No join mapping for *PARTY_ID **
73
PLANTCONCEPT_ID,,** No join mapping for *PLANTCONCEPT_ID **
74
PLANTNAME_ID,,** No join mapping for *PLANTNAME_ID **
75
ROLE_ID,,** No join mapping for *ROLE_ID **
76 6808 aaronmk
Subclass,,** No join mapping for *Subclass/_alt/2 **
77
Subkingdom,,** No join mapping for *Subkingdom/_alt/2 **
78 6742 aaronmk
TAXONINTERPRETATION_ID,,** No join mapping for *TAXONINTERPRETATION_ID **
79
USDAPlantsCode,,** No join mapping for *USDAPlantsCode **
80
VascularPlant,,** No join mapping for *VascularPlant **
81
accessionCode,,** No join mapping for *accessionCode **
82
collectionNumber,,** No join mapping for *collectionNumber **
83
collector_ID,,** No join mapping for *collector_ID **
84
commonName,,** No join mapping for *commonName **
85 6816 aaronmk
composite family,,** No join mapping for *composite family/_alt/2 **
86
composite genus,,** No join mapping for *composite genus/_alt/2 **
87
composite species,,** No join mapping for *composite species/_alt/2 **
88
composite variety,,** No join mapping for *composite variety/_alt/2 **
89 6742 aaronmk
contactInstructions,,** No join mapping for *contactInstructions **
90
currentInterpretation,,** No join mapping for *currentInterpretation **
91
currentName_ID,,** No join mapping for *currentName_ID **
92
currentTaxonInterpPlantConcept_ID,,** No join mapping for *currentTaxonInterpPlantConcept_ID **
93
cust_cvs_collectionFlag,,** No join mapping for *cust_cvs_collectionFlag **
94
cust_cvs_corner1Presence,,** No join mapping for *cust_cvs_corner1Presence **
95
cust_cvs_corner2Presence,,** No join mapping for *cust_cvs_corner2Presence **
96
cust_cvs_corner3Presence,,** No join mapping for *cust_cvs_corner3Presence **
97
cust_cvs_corner4Presence,,** No join mapping for *cust_cvs_corner4Presence **
98
cust_cvs_corner5Presence,,** No join mapping for *cust_cvs_corner5Presence **
99
dba_src_ID,,** No join mapping for *dba_src_ID **
100
dba_unsure,,** No join mapping for *dba_unsure **
101 6808 aaronmk
denorm_category,,** No join mapping for *category/_alt/1 **
102
denorm_division,,** No join mapping for *division/_alt/1 **
103
denorm_hybridX,,** No join mapping for *hybridX/_alt/1 **
104
denorm_quadAbbr,,** No join mapping for *quadAbbr/_alt/1 **
105
denorm_quadName,,** No join mapping for *quadName/_alt/1 **
106
denorm_triAbbr,,** No join mapping for *triAbbr/_alt/1 **
107
denorm_triName,,** No join mapping for *triName/_alt/1 **
108 6742 aaronmk
email,,** No join mapping for *email **
109
entry_herbLineID,,** No join mapping for *entry_herbLineID **
110
entry_sortOrder,,** No join mapping for *entry_sortOrder **
111
entry_treeLineID,,** No join mapping for *entry_treeLineID **
112
entry_unknownSp,,** No join mapping for *entry_unknownSp **
113
entry_userInitials,,** No join mapping for *entry_userInitials **
114
exotic,,** No join mapping for *exotic **
115
groupType,,** No join mapping for *groupType **
116
growthForm_short,,** No join mapping for *growthForm_short **
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interpretationType,,** No join mapping for interpretationType **
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lowestChildRank,,** No join mapping for *lowestChildRank **
119
lowestParentConcept_ID,,** No join mapping for *lowestParentConcept_ID **
120
lowestParentName,,** No join mapping for *lowestParentName **
121
middleName,,** No join mapping for *middleName **
122
museum_ID,,** No join mapping for *museum_ID **
123
notesMgt,,** No join mapping for *notesMgt **
124
notesPublic,,** No join mapping for *notesPublic **
125
organizationName,,** No join mapping for *organizationName **
126
originalInterpretation,,** No join mapping for *originalInterpretation **
127
partyType,,** No join mapping for *partyType **
128
plantCode,,** No join mapping for *plantCode **
129
plantConcept_accessionCode,,** No join mapping for *plantConcept_accessionCode **
130
plantConcept_dba_src_ID,,** No join mapping for *plantConcept_dba_src_ID **
131
plantConcept_entry_sppID,,** No join mapping for *plantConcept_entry_sppID **
132
plantConcept_reference_ID,,** No join mapping for *plantConcept_reference_ID **
133
plantDescription,,** No join mapping for *plantDescription **
134
reference_ID,,** No join mapping for *reference_ID **
135
revisions,,** No join mapping for *revisions **
136
salutation,,** No join mapping for *salutation **
137 6816 aaronmk
section,,** No join mapping for *section/_alt/2 **
138
subgenus,,** No join mapping for subgenus/_alt/2 **
139 6742 aaronmk
suffix,,** No join mapping for *suffix **
140
taxonConfidence,,** No join mapping for *taxonConfidence **
141
taxonInferenceArea,,** No join mapping for *taxonInferenceArea **
142
taxonInterpretation_PARTY_ID,,** No join mapping for *taxonInterpretation_PARTY_ID **
143
taxonInterpretation_PLANTNAME_ID,,** No join mapping for *taxonInterpretation_PLANTNAME_ID **
144
taxonInterpretation_accessionCode,,** No join mapping for *taxonInterpretation_accessionCode **
145
taxonInterpretation_dba_src_ID,,** No join mapping for *taxonInterpretation_dba_src_ID **
146
taxonObservationNotes,,** No join mapping for *taxonObservationNotes **
147
taxonObservation_accessionCode,,** No join mapping for *taxonObservation_accessionCode **
148
taxonObservation_dba_src_ID,,** No join mapping for *taxonObservation_dba_src_ID **
149
taxonObservation_entry_sppID,,** No join mapping for *taxonObservation_entry_sppID **
150
taxonObservation_reference_ID,,** No join mapping for *taxonObservation_reference_ID **
151 6803 aaronmk
taxonRank,,** No non-empty join mapping for OMIT ** Omitted because taxonLevel contains this information in text form
152 6742 aaronmk
temp_taxonUpToDate,,** No join mapping for *temp_taxonUpToDate **
153 6816 aaronmk
tribe,,** No join mapping for *tribe/_alt/2 **
154 6742 aaronmk
usda_code,,** No join mapping for *usda_code **
155
usda_growthForm,,** No join mapping for *usda_growthForm **
156
woody,,** No join mapping for *woody **