Revision 7194
Added by Aaron Marcuse-Kubitza almost 12 years ago
inputs/SALVIAS/plotObservations/VegBIEN.csv | ||
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116 | 116 |
auth,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/author,Brad: This is the author of the scientificName. |
117 | 117 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family, |
118 | 118 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus, |
119 |
morphoname,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/morphoname,"Not the morphospecies, which is stored in Species" |
|
119 | 120 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet, |
120 | 121 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/verbatimrank, |
121 | 122 |
cfaff,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,"Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank." |
... | ... | |
146 | 147 |
ind_id,,** No join mapping for *ind_id ** Brad: OMIT |
147 | 148 |
infra_auth_1,,** No join mapping for *infra_auth_1 ** |
148 | 149 |
morphocf,,** No join mapping for *morphocf ** |
149 |
morphoname,,"** No join mapping for morphoname ** Not the morphospecies, which is stored in Species" |
|
150 | 150 |
name_status,,"** No non-empty join mapping for OMIT ** Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS." |
151 | 151 |
other_annotations,,** No join mapping for *other_annotations ** |
152 | 152 |
perp_dist,,** No join mapping for *perp_dist ** |
inputs/SALVIAS/plotObservations/test.xml.ref | ||
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233 | 233 |
<author>$auth</author> |
234 | 234 |
<family>$Family</family> |
235 | 235 |
<genus>$Genus</genus> |
236 |
<morphoname>$morphoname</morphoname> |
|
236 | 237 |
<specific_epithet>$Species</specific_epithet> |
237 | 238 |
<verbatimrank>$infra_rank_1</verbatimrank> |
238 | 239 |
</taxonverbatim> |
inputs/SALVIAS/plotObservations/unmapped_terms.csv | ||
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8 | 8 |
*GenAuth |
9 | 9 |
*infra_auth_1 |
10 | 10 |
*common_name |
11 |
morphoname |
|
12 | 11 |
*species_code |
13 | 12 |
*height_class |
14 | 13 |
*height_m_commercial |
mappings/VegCore-VegBIEN.csv | ||
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228 | 228 |
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/author, |
229 | 229 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family, |
230 | 230 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus, |
231 |
morphoname,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/morphoname, |
|
231 | 232 |
morphospecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/morphospecies, |
232 | 233 |
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet, |
233 | 234 |
taxonName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/taxonname, |
mappings/for_review/VegCore-VegBIEN.csv | ||
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228 | 228 |
scientificNameAuthorship,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/author, |
229 | 229 |
family,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/family, |
230 | 230 |
genus,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/genus, |
231 |
morphoname,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/morphoname, |
|
231 | 232 |
morphospecies,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/morphospecies, |
232 | 233 |
specificEpithet,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/specific_epithet, |
233 | 234 |
taxonName,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/taxonname, |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: Mapped morphoname