Revision 7216
Added by Aaron Marcuse-Kubitza over 11 years ago
| inputs/XAL/Specimen/new_terms.csv | ||
|---|---|---|
| 19 | 19 |
darwin:DayIdentified,dayIdentified,, |
| 20 | 20 |
darwin:TypeStatus,typeStatus,, |
| 21 | 21 |
darwin:CollectorNumber,recordNumber,, |
| 22 |
darwin:FieldNumber,UNUSED,,This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber). |
|
| 23 | 22 |
darwin:Collector,recordedBy,, |
| 24 | 23 |
darwin:YearCollected,yearCollected,, |
| 25 | 24 |
darwin:MonthCollected,monthCollected,, |
| ... | ... | |
| 33 | 32 |
darwin:Locality,locality,, |
| 34 | 33 |
darwin:Longitude,decimalLongitude,, |
| 35 | 34 |
darwin:Latitude,decimalLatitude,, |
| 36 |
darwin:CoordinatePrecision,UNUSED,, |
|
| 37 | 35 |
darwin:MinimumElevation,minimumElevationInMeters,, |
| 38 | 36 |
darwin:MaximumElevation,maximumElevationInMeters,, |
| 39 | 37 |
darwin:MinimumDepth,minimumDepthInMeters,, |
| inputs/XAL/new_terms.csv | ||
|---|---|---|
| 5 | 5 |
darwin:Collector,recordedBy,, |
| 6 | 6 |
darwin:CollectorNumber,recordNumber,, |
| 7 | 7 |
darwin:ContinentOcean,continent,, |
| 8 |
darwin:CoordinatePrecision,UNUSED,, |
|
| 9 | 8 |
darwin:Country,country,, |
| 10 | 9 |
darwin:County,county,, |
| 11 | 10 |
darwin:DateLastModified,modified,, |
| 12 | 11 |
darwin:DayCollected,dayCollected,, |
| 13 | 12 |
darwin:DayIdentified,dayIdentified,, |
| 14 | 13 |
darwin:Family,family,, |
| 15 |
darwin:FieldNumber,UNUSED,,This historical DwC term (http://rs.tdwg.org/dwc/terms/history/index.htm#fieldNumber-2009-04-24) has close to the same meaning as recordNumber (http://rs.tdwg.org/dwc/terms/#recordNumber). |
|
| 16 | 14 |
darwin:Genus,genus,, |
| 17 | 15 |
darwin:IdentifiedBy,identifiedBy,, |
| 18 | 16 |
darwin:IndividualCount,individualCount,, |
| inputs/CTFS/new_terms.csv | ||
|---|---|---|
| 1 |
InfraSpecificLevel,UNUSED,, |
|
| 2 | 1 |
MeasureID,individualID,, |
| 3 | 2 |
SizeOfSite,plotArea_ha,,"""Size in hectares"" (SizeOfSite comments in <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/CTFS/_src/ctfs-comments_worksheet.xls>)" |
| 4 | 3 |
SpeciesAuthority,scientificNameAuthorship,, |
| inputs/CTFS/TaxonOccurrence/new_terms.csv | ||
|---|---|---|
| 1 |
InfraSpecificLevel,UNUSED,, |
|
| 2 | 1 |
SpeciesAuthority,scientificNameAuthorship,, |
| inputs/U/Specimen/new_terms.csv | ||
|---|---|---|
| 1 | 1 |
Barcode,catalogNumber,, |
| 2 |
Prefix,UNUSED,, |
|
| 3 | 2 |
Number,recordNumber,, |
| 4 |
Suffix,UNUSED,, |
|
| 5 | 3 |
Addcoll,recordedBy,/_join/2, |
| 6 | 4 |
Colldd,dayCollected,, |
| 7 | 5 |
Collmm,monthCollected,, |
| 8 | 6 |
Collyy,yearCollected,, |
| 9 |
DateInfo,UNUSED,, |
|
| 10 | 7 |
cf,identificationQualifier,, |
| 11 | 8 |
Detby,identifiedBy,, |
| 12 | 9 |
Detyy,yearIdentified,, |
| inputs/U/new_terms.csv | ||
|---|---|---|
| 3 | 3 |
Colldd,dayCollected,, |
| 4 | 4 |
Collmm,monthCollected,, |
| 5 | 5 |
Collyy,yearCollected,, |
| 6 |
DateInfo,UNUSED,, |
|
| 7 | 6 |
Detby,identifiedBy,, |
| 8 | 7 |
Detyy,yearIdentified,, |
| 9 | 8 |
Ecology,habitat,, |
| ... | ... | |
| 14 | 13 |
Newgazett,verbatimLocality,"/_join/1/_label[label=""gazetteer""]/value/_join/2",Only used in 1 row |
| 15 | 14 |
Number,recordNumber,, |
| 16 | 15 |
Phenology,reproductiveCondition,, |
| 17 |
Prefix,UNUSED,, |
|
| 18 |
Suffix,UNUSED,, |
|
| 19 | 16 |
cf,identificationQualifier,, |
| inputs/input.Makefile | ||
|---|---|---|
| 338 | 338 |
$(bin)/autoremove $@ |
| 339 | 339 |
newTerms = tail -n +2 $<|$(bin)/filter_out_ci 0 $(vocab)|$(bin)/filter_out_ci 0\ |
| 340 | 340 |
$(dict) $(if $(wildcard $(word 4,$+)),|$(bin)/filter_out_ci 0 $(word 4,$+))\ |
| 341 |
|grep -vE '^"?:' >$@; exit 0# because grep exits nonzero if no match
|
|
| 341 |
|grep -vE -e '^"?:' -e 'UNUSED' >$@; exit 0 # grep exits nonzero if no match
|
|
| 342 | 342 |
|
| 343 | 343 |
termsSubdirs := $(importTables) |
| 344 | 344 |
|
| inputs/CVS/new_terms.csv | ||
|---|---|---|
| 20 | 20 |
denorm_species,specificEpithet,/_alt/1, |
| 21 | 21 |
denorm_triAbbr,*triAbbr,/_alt/1, |
| 22 | 22 |
denorm_triName,*triName,/_alt/1, |
| 23 |
elevationRange,UNUSED,, |
|
| 24 | 23 |
exchangeCapacity,cationExchangeCapacity_cmol_kg,, |
| 25 | 24 |
givenName,recordedBy_givenName,, |
| 26 | 25 |
interpretationDate,dateIdentified,, |
| inputs/CVS/plot_/new_terms.csv | ||
|---|---|---|
| 4 | 4 |
confidentialityStatus,coordinateUncertaintyInMeters,"/_alt/1/_km_to_m/value/_map:[1=1,2=10,3=100,./{0,4,5,6}=]/value",Values defined at <http://vegbank.org/vegbank/views/dba_fielddescription_detail.jsp?view=detail&wparam=1581&entity=dba_fielddescription¶ms=1581>
|
| 5 | 5 |
shape,footprintWKT,, |
| 6 | 6 |
area,plotArea_m2,,"""Total area of the plot in m2"" (area definition at <http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename>)" |
| 7 |
elevationRange,UNUSED,, |
|
| 8 | 7 |
area|country|territory,country,, |
| 9 | 8 |
region|state|province,stateProvince,, |
| inputs/ARIZ/Specimen/new_terms.csv | ||
|---|---|---|
| 1 | 1 |
CatalogNumberNumeric,catalogNumber,/_alt/1, |
| 2 | 2 |
TimeCollected,eventTime,, |
| 3 | 3 |
VerbatimCollectingDate,dateCollected,/_alt/0, |
| 4 |
HorizontalDatum,UNUSED,, |
|
| 5 | 4 |
OriginalCoordinateSystem,verbatimSRS,, |
| 6 | 5 |
GeorefMethod,georeferenceProtocol,, |
| 7 | 6 |
LatLongComments,georeferenceRemarks,, |
| 8 | 7 |
IdentificationModifier,identificationQualifier,, |
| 9 |
Tissues,UNUSED,, |
|
| 10 | 8 |
AgeClass,lifeStage,, |
| 11 | 9 |
GenBankNum,associatedSequences,"/_label[label=""GenBank""]/value", |
| 12 | 10 |
RelatedCatalogedItems,relatedResourceID,/_alt/2,Used only when OtherCatalogNumbers is NULL |
| inputs/ARIZ/new_terms.csv | ||
|---|---|---|
| 2 | 2 |
CatalogNumberNumeric,catalogNumber,/_alt/1, |
| 3 | 3 |
GenBankNum,associatedSequences,"/_label[label=""GenBank""]/value", |
| 4 | 4 |
GeorefMethod,georeferenceProtocol,, |
| 5 |
HorizontalDatum,UNUSED,, |
|
| 6 | 5 |
IdentificationModifier,identificationQualifier,, |
| 7 | 6 |
LatLongComments,georeferenceRemarks,, |
| 8 | 7 |
OriginalCoordinateSystem,verbatimSRS,, |
| 9 | 8 |
RelatedCatalogedItems,relatedResourceID,/_alt/2,Used only when OtherCatalogNumbers is NULL |
| 10 | 9 |
TimeCollected,eventTime,, |
| 11 |
Tissues,UNUSED,, |
|
| 12 | 10 |
VerbatimCollectingDate,dateCollected,/_alt/0, |
| inputs/VegBank/new_terms.csv | ||
|---|---|---|
| 4 | 4 |
confidentialitystatus,accessRights,"/_map:[./{0,1,2,3,4}=public,5=""data by request"",6=private]/value",Values defined at <http://vegbank.org/vegbank/views/dba_fielddescription_detail.jsp?view=detail&wparam=1581&entity=dba_fielddescription¶ms=1581>
|
| 5 | 5 |
confidentialitystatus,coordinateUncertaintyInMeters,"/_alt/1/_km_to_m/value/_map:[1=1,2=10,3=100,./{0,4,5,6}=]/value",Values defined at <http://vegbank.org/vegbank/views/dba_fielddescription_detail.jsp?view=detail&wparam=1581&entity=dba_fielddescription¶ms=1581>
|
| 6 | 6 |
cover,coverPercent,, |
| 7 |
elevationrange,UNUSED,, |
|
| 8 | 7 |
exchangecapacity,cationExchangeCapacity_cmol_kg,, |
| 9 | 8 |
givenname,recordedBy_givenName,, |
| 10 | 9 |
interpretationdate,dateIdentified,, |
| inputs/VegBank/plot_/new_terms.csv | ||
|---|---|---|
| 4 | 4 |
confidentialitystatus,coordinateUncertaintyInMeters,"/_alt/1/_km_to_m/value/_map:[1=1,2=10,3=100,./{0,4,5,6}=]/value",Values defined at <http://vegbank.org/vegbank/views/dba_fielddescription_detail.jsp?view=detail&wparam=1581&entity=dba_fielddescription¶ms=1581>
|
| 5 | 5 |
shape,footprintWKT,, |
| 6 | 6 |
area,plotArea_m2,,"""Total area of the plot in m2"" (area definition at <http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=plot&entity=dba_tabledescription&where=where_tablename>)" |
| 7 |
elevationrange,UNUSED,, |
|
| 8 | 7 |
area|country|territory,country,, |
| 9 | 8 |
region|state|province,stateProvince,, |
Also available in: Unified diff
input.Makefile: Maps validation: %/new_terms.csv: Filter out terms that map to UNUSED, because these are not mappings that are useful as VegCore synonyms