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1 6406 aaronmk
U,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
2 6409 aaronmk
Barcode,"/_if[@name=""if specimen""]/cond/_exists",
3
ID,"/_if[@name=""if specimen""]/cond/_exists",
4 6756 aaronmk
ID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/1",
5
Barcode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists",
6
Barcode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
7
ID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
8
Barcode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/else",
9 6432 aaronmk
ID,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
10
Number,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
11
Gazetteer,"/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/2/_join/1/_label[label=""gazetteer""]/value/_join/1",
12
Newgazett,"/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/2/_join/1/_label[label=""gazetteer""]/value/_join/2",Only used in 1 row
13
Locnotes,/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/2/_join/2,
14
Ecology,/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/3,
15 4566 aaronmk
Colldd,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
16
Collmm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
17
Collyy,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
18 4638 aaronmk
Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
19 7195 aaronmk
Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_first/2,
20 4057 aaronmk
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
21 7198 aaronmk
Number,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/else",
22 6791 aaronmk
Barcode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
23
ID,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
24 3970 aaronmk
ID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
25 7195 aaronmk
Number,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/3",
26 6171 aaronmk
Collector,/location/locationevent/taxonoccurrence/collector_id/party/fullname/_join/1,
27
Addcoll,/location/locationevent/taxonoccurrence/collector_id/party/fullname/_join/2,
28 6313 aaronmk
ID,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
29 6314 aaronmk
Number,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
30 4834 aaronmk
ID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3,
31 5600 aaronmk
Detby,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname,
32 5657 aaronmk
Detyy,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/creationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
33 6179 aaronmk
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
34 5657 aaronmk
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
35 6179 aaronmk
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
36 5657 aaronmk
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
37 7142 aaronmk
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family,
38
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2,
39 5657 aaronmk
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family,
40
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus,
41 5645 aaronmk
Detyy,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
42 4205 aaronmk
cf,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
43 4079 aaronmk
Barcode,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
44 7198 aaronmk
Number,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/then",
45 4684 aaronmk
Gazetteer,"/location/locationnarrative/_merge/2/_join/1/_label[label=""gazetteer""]/value/_join/1",
46
Newgazett,"/location/locationnarrative/_merge/2/_join/1/_label[label=""gazetteer""]/value/_join/2",Only used in 1 row
47
Locnotes,/location/locationnarrative/_merge/2/_join/2,
48 3969 aaronmk
Ecology,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
49 5861 aaronmk
Lat,"/location/locationplace/*_id/place/*_id/coordinates/latitude_deg/_nullIf:[null=0,type=float]/value",
50
Long,"/location/locationplace/*_id/place/*_id/coordinates/longitude_deg/_nullIf:[null=0,type=float]/value",
51 5855 aaronmk
Country,/location/locationplace/*_id/place/country,
52 6179 aaronmk
Lat,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/latitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
53
Long,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/longitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
54
Country,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/country/_first/2,
55 4979 aaronmk
Alt,,** No join mapping for *Alt ** What is this?
56
Alt2,,** No join mapping for *Alt2 ** What is this?
57
Coorsyst,,** No join mapping for *Coorsyst **
58 4895 aaronmk
DateInfo,,** No non-empty join mapping for UNUSED **
59 4979 aaronmk
EW,,** No join mapping for *EW **
60
Majorarea,,** No join mapping for *Majorarea **
61
NS,,** No join mapping for *NS **
62 4844 aaronmk
Phenology,,** No join mapping for reproductiveCondition **
63 4895 aaronmk
Prefix,,** No non-empty join mapping for UNUSED **
64
Suffix,,** No non-empty join mapping for UNUSED **