| 1 |
6406
|
aaronmk
|
TEAM,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
|
| 2 |
6409
|
aaronmk
|
Id,"/_if[@name=""if specimen""]/cond/_exists",
|
| 3 |
4987
|
aaronmk
|
Subplot Number,"/location/_if[@name=""if subplot""]/cond/_exists",
|
| 4 |
4879
|
aaronmk
|
1ha Plot Number,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/1",
|
| 5 |
6756
|
aaronmk
|
Id,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/1",
|
| 6 |
|
|
Id,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
|
| 7 |
4879
|
aaronmk
|
1ha Plot Number,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
|
| 8 |
|
|
Subplot Number,/location/authorlocationcode,
|
| 9 |
6432
|
aaronmk
|
Id,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
| 10 |
4879
|
aaronmk
|
Site Name,/location/locationevent/*_id/project/projectname,
|
| 11 |
4987
|
aaronmk
|
Subplot Number,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists",
|
| 12 |
5977
|
aaronmk
|
Observation Date,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/cond/_exists",
|
| 13 |
6002
|
aaronmk
|
Subplot Number,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/cond/_first/2",
|
| 14 |
|
|
1ha Plot Number,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/then",
|
| 15 |
|
|
Subplot Number,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode/_if[@name=""if subplot""]/cond/_first/2",
|
| 16 |
6217
|
aaronmk
|
Observation Date,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/obsenddate/_alt/2/_dateRangeEnd/value",
|
| 17 |
|
|
Observation Date,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/obsstartdate/_alt/2/_dateRangeStart/value",
|
| 18 |
|
|
Observation Date,/location/locationevent/obsenddate/_alt/2/_dateRangeEnd/value,
|
| 19 |
|
|
Observation Date,/location/locationevent/obsstartdate/_alt/2/_dateRangeStart/value,
|
| 20 |
6791
|
aaronmk
|
Id,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
|
| 21 |
4879
|
aaronmk
|
Id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
|
| 22 |
4880
|
aaronmk
|
Diameter at 1.3m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight_m/_cm_to_m/value,"""Tree diameter measurement. {cm}"" (Diameter definition on p. 7 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"
|
| 23 |
4879
|
aaronmk
|
Tree Number,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/tag,
|
| 24 |
5536
|
aaronmk
|
1ha Plot X Coordinate,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition_m,"""Point of intersection {in the X axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot X Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"
|
| 25 |
|
|
1ha Plot Y Coordinate,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition_m,"""Point of intersection {in the Y axis} where the tree was observed in the 1ha plot. {m}"" (1ha Plot Y Coordinate definition on p. 8 at <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/TEAM/_src/TEAM-DataPackage-20120920191251_3859/Vegetation+-+Trees+&+Lianas/Vegetation-Tree-and-Liana-Metadata-1.5.pdf>)"
|
| 26 |
6992
|
aaronmk
|
1ha Plot Number,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
|
| 27 |
|
|
Tree Number,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/2",
|
| 28 |
6171
|
aaronmk
|
Names of Collectors,/location/locationevent/taxonoccurrence/collector_id/party/fullname,
|
| 29 |
6313
|
aaronmk
|
Id,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
| 30 |
4879
|
aaronmk
|
Id,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3,
|
| 31 |
5657
|
aaronmk
|
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
|
| 32 |
6179
|
aaronmk
|
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
|
| 33 |
5657
|
aaronmk
|
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
| 34 |
6179
|
aaronmk
|
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
|
| 35 |
5657
|
aaronmk
|
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
|
| 36 |
7142
|
aaronmk
|
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family,
|
| 37 |
|
|
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
| 38 |
|
|
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1,
|
| 39 |
5657
|
aaronmk
|
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family,
|
| 40 |
|
|
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus,
|
| 41 |
5783
|
aaronmk
|
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet,
|
| 42 |
5861
|
aaronmk
|
Latitude,"/location/locationplace/*_id/place/*_id/coordinates/latitude_deg/_nullIf:[null=0,type=float]/value",
|
| 43 |
|
|
Longitude,"/location/locationplace/*_id/place/*_id/coordinates/longitude_deg/_nullIf:[null=0,type=float]/value",
|
| 44 |
6179
|
aaronmk
|
Latitude,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/latitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
|
| 45 |
|
|
Longitude,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/longitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
|
| 46 |
7009
|
aaronmk
|
Subplot Number,"/location/sourceaccessioncode/_if[@name=""if locationID""]/then/_if[@name=""if subplot""]/cond/_exists",
|
| 47 |
|
|
Subplot Number,"/location/sourceaccessioncode/_if[@name=""if locationID""]/then/_if[@name=""if subplot""]/then/_join/2",
|
| 48 |
4979
|
aaronmk
|
Comments,,** No join mapping for *Comments **
|
| 49 |
|
|
Condition Codes,,** No join mapping for *Condition Codes **
|
| 50 |
|
|
Data Level,,** No join mapping for *Data Level **
|
| 51 |
|
|
Data Set Contact,,** No join mapping for *Data Set Contact **
|
| 52 |
|
|
Data Set Creator Institution,,** No join mapping for *Data Set Creator Institution **
|
| 53 |
|
|
Data Set Creator Scientist,,** No join mapping for *Data Set Creator Scientist **
|
| 54 |
|
|
Location Codes,,** No join mapping for *Location Codes **
|
| 55 |
|
|
Max Diameter,,** No join mapping for *Max Diameter **
|
| 56 |
|
|
Max Diameter POM,,** No join mapping for *Max Diameter POM **
|
| 57 |
6168
|
aaronmk
|
Method,,"** No non-empty join mapping for OMIT ** Just contains ""Derived"", for 357 rows"
|
| 58 |
4979
|
aaronmk
|
Protocol Version,,** No join mapping for *Protocol Version **
|
| 59 |
|
|
Sampling Period,,** No join mapping for *Sampling Period **
|
| 60 |
|
|
Sampling Unit Name,,** No join mapping for *Sampling Unit Name **
|
