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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 7037 almost 12 years Aaron Marcuse-Kubitza backups/Makefile: Synchronization: %/download: ...
  bin 7276 almost 12 years Aaron Marcuse-Kubitza import_all: Output the PIDs of the import_scrub...
  config 6321 about 12 years Aaron Marcuse-Kubitza Added config/bien_read_password
  inputs 7282 almost 12 years Aaron Marcuse-Kubitza input.Makefile: Taxonomic scrubbing: Added scru...
  lib 7243 almost 12 years Aaron Marcuse-Kubitza db_xml.py: put_table(): Fixed bug where for vie...
  mappings 7215 almost 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: fieldNumber (auth...
  schemas 7277 almost 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: provider_count_view: Inclu...
  to_do 7207 almost 12 years Aaron Marcuse-Kubitza Added to_do/timeline.2013.xls (from Brad, conve...
  validation 5971 about 12 years Aaron Marcuse-Kubitza Updated validation/BIEN2_Analytical_DB_overview...
Makefile 11.8 KB 7268 almost 12 years Aaron Marcuse-Kubitza root Makefile: Datasources: import: Use new imp...
README.TXT 16.9 KB 7224 almost 12 years Aaron Marcuse-Kubitza README.TXT: Data import: Checking free disk spa...
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
7282 01/18/2013 05:21 AM Aaron Marcuse-Kubitza

input.Makefile: Taxonomic scrubbing: Added scrub target and use it in import_scrub
7281 01/18/2013 05:18 AM Aaron Marcuse-Kubitza

input.Makefile: Import to VegBIEN: Moved import, rm to top of section since they are top-level targets and don't depend on the variables defined for %/import
7280 01/18/2013 05:17 AM Aaron Marcuse-Kubitza

input.Makefile: Moved rm to Import to VegBIEN section
7279 01/18/2013 05:16 AM Aaron Marcuse-Kubitza

input.Makefile: Moved taxonomic scrubbing targets to separate Taxonomic scrubbing section
7278 01/18/2013 04:43 AM Aaron Marcuse-Kubitza

inputs/import.stats.xls: Updated import times
7277 01/18/2013 03:34 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: provider_count_view: Include only sources with at least one row. Currently (as of r7023), all entries in BIEN2's geoscrub.herbaria are also in VegBIEN, so the filter is not yet necessary, but switching to bien3_adb.ih could create source entries without data rows which should be excluded from the providers list.
7276 01/18/2013 03:25 AM Aaron Marcuse-Kubitza

import_all: Output the PIDs of the import_scrub and after_import processes, so those processes can be managed without shell job control. This is useful if the connection is lost to the remote shell running the import, which prevents using job control on the import processes.
7275 01/18/2013 01:23 AM Aaron Marcuse-Kubitza

input.Makefile: Import to VegBIEN: import_scrub: Run `make scrub` in the background, to allow the import to continue with the next table rather than having to wait for the current table to be scrubbed
7274 01/18/2013 12:53 AM Aaron Marcuse-Kubitza

inputs/.TNRS/public.unscrubbed_taxondetermination_view/scrub.make: Moved waitself call to top of script
7273 01/18/2013 12:52 AM Aaron Marcuse-Kubitza

inputs/import.stats.xls: Updated import times

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