99 |
99 |
silt_percent,/location/locationevent/soilsample/silt_fraction/_percent_to_fraction/value,
|
100 |
100 |
sodium_percent,/location/locationevent/soilsample/sodium_fraction/_percent_to_fraction/value,
|
101 |
101 |
texture,/location/locationevent/soilsample/texture,
|
|
102 |
acceptedScientificName,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/cond/_exists",
|
|
103 |
acceptedTaxonName,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/cond/_exists",
|
|
104 |
taxonIsCanonical,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/matched_label_id/_if[@name=""if is canonical name""]:[then=0]/cond",
|
|
105 |
acceptedCultivar,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=cultivar]/taxonepithet",
|
|
106 |
acceptedForma,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=forma]/taxonepithet",
|
|
107 |
acceptedVariety,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=variety]/taxonepithet",
|
|
108 |
acceptedSubspecies,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=subspecies]/taxonepithet",
|
|
109 |
acceptedSpecificEpithet,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
|
|
110 |
taxonIsCanonical,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/cond/_exists",
|
|
111 |
acceptedGenus,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
|
|
112 |
acceptedGenus,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
|
113 |
taxonIsCanonical,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/cond/_exists",
|
|
114 |
acceptedFamily,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
|
|
115 |
acceptedFamily,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
|
|
116 |
acceptedOrder,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=order]/taxonepithet",
|
|
117 |
acceptedClass,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=class]/taxonepithet",
|
|
118 |
acceptedPhylum,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=phylum]/taxonepithet",
|
|
119 |
acceptedKingdom,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=kingdom]/taxonepithet",
|
|
120 |
acceptedTaxonRank,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/rank",
|
|
121 |
acceptedInfraspecificEpithet,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/parent_id/taxonlabel/taxonepithet",
|
|
122 |
acceptedTaxonRank,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/rank",
|
|
123 |
acceptedScientificNameID,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/sourceaccessioncode",
|
|
124 |
acceptedFamily,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family",
|
|
125 |
acceptedScientificName,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/1",
|
|
126 |
acceptedTaxonName,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/1",
|
|
127 |
acceptedGenus,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
|
128 |
acceptedSpecificEpithet,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
|
|
129 |
acceptedSubspecies,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/4",
|
|
130 |
acceptedInfraspecificEpithet,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
|
|
131 |
acceptedTaxonRank,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
|
|
132 |
acceptedInfraspecificEpithet,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2",
|
|
133 |
acceptedVariety,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/6/_join_words:[1=""var. ""]/2",
|
|
134 |
acceptedForma,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/7/_join_words:[1=""fm. ""]/2",
|
|
135 |
acceptedCultivar,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/8/_join_words:[1=""cult. ""]/2",
|
|
136 |
acceptedScientificNameAuthorship,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/*_id/taxonlabel:[taxonstatus=Accepted]/taxonomicname/_merge_prefix/value/_alt/2/_join_words/2",
|
|
137 |
acceptedScientificNameAuthorship,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/author",
|
|
138 |
acceptedFamily,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/family",
|
|
139 |
acceptedGenus,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/genus",
|
|
140 |
acceptedSpecificEpithet,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/specific_epithet",
|
|
141 |
acceptedTaxonName,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/taxonname",
|
|
142 |
acceptedScientificName,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/taxonomicname",
|
|
143 |
acceptedTaxonRank,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/*_id/taxonverbatim/verbatimrank",
|
|
144 |
dateIdentified,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/determinationdate/_alt/1/_dateRangeStart/value",
|
|
145 |
dayIdentified,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
146 |
monthIdentified,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
147 |
yearIdentified,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
148 |
taxonRemarks,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/notes",
|
|
149 |
identificationQualifier,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/taxonfit",
|
|
150 |
matchedFamilyFit_fraction,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/taxonfit/_max/1",
|
|
151 |
matchedGenusFit_fraction,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/taxonfit/_max/2",
|
|
152 |
matchedSpeciesFit_fraction,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/taxonfit/_max/3",
|
|
153 |
matchedTaxonFit_fraction,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/taxonfit/_max/4",
|
102 |
154 |
dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1,
|
103 |
155 |
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
104 |
156 |
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
mappings/VegCore-VegBIEN.csv: Mapped accepted* taxonomic name, now to separate accepted taxondetermination