Revision 7312
Added by Aaron Marcuse-Kubitza about 12 years ago
inputs/.herbaria/herbaria/header.csv | ||
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herbariumAcronym,City,State,Country,CoordinatesVerbatim,latitude,longitude,ID,countryStd,countryID,Index_2_index,Index_3_index,Index_4_index,Index_5_index,Index_countryStd_index,Index_countryID_index |
inputs/.herbaria/herbaria/map.csv | ||
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herbaria,VegCore,Filter,Comments |
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herbariumAcronym,institutionCode,, |
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City,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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State,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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Country,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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CoordinatesVerbatim,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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latitude,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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longitude,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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ID,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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countryStd,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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countryID,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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Index_2_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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Index_3_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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Index_4_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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Index_5_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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Index_countryStd_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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Index_countryID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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:herbarium,referenceType,, |
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:specimen,observationType,, |
inputs/.herbaria/herbaria/test.xml.ref | ||
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Put template: |
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<VegBIEN> |
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<_setDefault id="-1"> |
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<source_id><source><shortname>herbaria</shortname></source></source_id> |
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<path> |
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<_simplifyPath> |
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<next>parent_id</next> |
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<path> |
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<source> |
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<shortname>$herbariumAcronym</shortname> |
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<observationtype>specimen</observationtype> |
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<sourcetype>herbarium</sourcetype> |
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</source> |
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</path> |
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</_simplifyPath> |
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</path> |
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</_setDefault> |
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</VegBIEN> |
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Inserted 2 new rows into database |
inputs/.herbaria/herbaria/VegBIEN.csv | ||
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herbaria,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments |
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herbariumAcronym,"/_if[@name=""if specimen""]/else/source/shortname/_first/1", |
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:specimen,"/_if[@name=""if specimen""]/else/source:[shortname/_first/2/_env:[name=source]]/observationtype", |
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:herbarium,"/_if[@name=""if specimen""]/else/source:[shortname/_first/2/_env:[name=source]]/sourcetype", |
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:specimen,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/cond/_eq:[right=plot]/left", |
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herbariumAcronym,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/then", |
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herbariumAcronym,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/name", |
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herbariumAcronym,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/then/sourcename/name/_split:[separator="", ""]/value", |
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City,,"** No non-empty join mapping for OMIT ** Just importing whether a datasource is a herbarium, for now" |
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CoordinatesVerbatim,,"** No non-empty join mapping for OMIT ** Just importing whether a datasource is a herbarium, for now" |
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Country,,"** No non-empty join mapping for OMIT ** Just importing whether a datasource is a herbarium, for now" |
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ID,,"** No non-empty join mapping for OMIT ** Just importing whether a datasource is a herbarium, for now" |
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Index_2_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
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Index_3_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
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Index_4_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
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Index_5_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
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Index_countryID_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
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Index_countryStd_index,,** No non-empty join mapping for OMIT ** Placeholder column created by MySQL to PostgreSQL translation |
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State,,"** No non-empty join mapping for OMIT ** Just importing whether a datasource is a herbarium, for now" |
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countryID,,"** No non-empty join mapping for OMIT ** Just importing whether a datasource is a herbarium, for now" |
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countryStd,,"** No non-empty join mapping for OMIT ** Just importing whether a datasource is a herbarium, for now" |
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latitude,,"** No non-empty join mapping for OMIT ** Just importing whether a datasource is a herbarium, for now" |
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longitude,,"** No non-empty join mapping for OMIT ** Just importing whether a datasource is a herbarium, for now" |
inputs/.herbaria/herbaria/new_terms.csv | ||
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herbariumAcronym,institutionCode,, |
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City,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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CoordinatesVerbatim,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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countryStd,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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countryID,OMIT,,"Just importing whether a datasource is a herbarium, for now" |
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Index_2_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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Index_3_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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Index_4_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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Index_5_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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Index_countryStd_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
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Index_countryID_index,OMIT,,Placeholder column created by MySQL to PostgreSQL translation |
Also available in: Unified diff
inputs/.herbaria/: Removed no longer needed herbaria/. Use ih/ instead.