Revision 742
Added by Aaron Marcuse-Kubitza almost 13 years ago
| mappings/DwC-VegBIEN.organisms.csv | ||
|---|---|---|
| 1 | 1 |
DwC,VegBIEN:/taxonoccurrence,Comments,Order |
| 2 |
identificationRemarks,,,123 |
|
| 3 |
minimumDepthInMeters,/*_id/locationevent/waterdepth/min,,74 |
|
| 4 |
footprintSRS,,,92 |
|
| 2 |
coordinatePrecision,/*_id/locationevent/*_id/location/locationaccuracy,,89 |
|
| 3 |
country,"/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63 |
|
| 4 |
stateProvince,"/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65 |
|
| 5 |
county,/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=county])/placename,,66 |
|
| 6 |
verbatimLocality,/*_id/locationevent/*_id/location/locationplace/*_id/namedplace/placedescription,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69 |
|
| 5 | 7 |
verbatimLatitude,/*_id/locationevent/*_id/location/reallatitude,,81 |
| 6 |
month,,,49 |
|
| 7 |
measurementDeterminedDate,,,171 |
|
| 8 |
informationWithheld,,,16 |
|
| 9 |
lithostratigraphicTerms,,,113 |
|
| 10 |
latestPeriodOrHighestSystem,,,106 |
|
| 11 |
reproductiveCondition,,,28 |
|
| 12 |
continent,,Brad: OMIT,59 |
|
| 13 |
endDayOfYear,,,47 |
|
| 14 |
identificationID,,,118 |
|
| 15 |
latestEraOrHighestErathem,,,104 |
|
| 16 |
occurrenceID,"/{aggregateoccurrence/*_id/plantobservation/authorplantcode,specimenreplicate:[*_id/reference]/sourceaccessioncode}","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
|
|
| 17 |
locationAccordingTo,,,78 |
|
| 18 |
latestEpochOrHighestSeries,,,108 |
|
| 19 |
coordinateUncertaintyInMeters,,,88 |
|
| 20 |
coordinatePrecision,/*_id/locationevent/*_id/location/locationaccuracy,,89 |
|
| 8 |
verbatimLongitude,/*_id/locationevent/*_id/location/reallongitude,,82 |
|
| 9 |
maximumElevationInMeters,"/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
|
|
| 10 |
minimumElevationInMeters,"/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
|
| 11 |
eventDate,/*_id/locationevent/obsstartdate/_*/date,,44 |
|
| 21 | 12 |
maximumDepthInMeters,/*_id/locationevent/waterdepth/max,,75 |
| 22 |
waterBody,,,60 |
|
| 23 |
resourceRelationshipID,,,159 |
|
| 13 |
minimumDepthInMeters,/*_id/locationevent/waterdepth/min,,74 |
|
| 14 |
habitat,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=habitat]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52 |
|
| 15 |
fieldNumber,/specimenreplicate:[*_id/reference]/catalognumber_dwc,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53 |
|
| 16 |
individualID,/specimenreplicate:[*_id/reference]/collectornumber_dwc,"Brad: OMIT; db-specific element, not relevant to VB/VX",24 |
|
| 17 |
georeferencedBy,/specimenreplicate:[*_id/reference]/verbatimcollectorname,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94 |
|
| 18 |
institutionCode,/specimenreplicate:[*_id/reference]/{museum_id/party/organizationname/_name/first},,11
|
|
| 19 |
collectionCode,"/specimenreplicate:[*_id/reference]/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
|
|
| 20 |
sex,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]]:[@fkey=tableRecord_ID]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26 |
|
| 21 |
dateIdentified,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_*/date",,120 |
|
| 22 |
identifiedBy,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
|
|
| 23 |
fieldNotes,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,iscurrent=true]/notes","Brad: mapping OK; NY appears to be using this field for almost anything, but mostly internal collections notes",54 |
|
| 24 |
scientificName,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname/_alt/1","Brad: Bob, Nick, please is this mapping OK?",134 |
|
| 25 |
scientificNameAuthorship,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153 |
|
| 26 |
class,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Class]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,144 |
|
| 27 |
family,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,146 |
|
| 28 |
genus,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,147 |
|
| 24 | 29 |
kingdom,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Kingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,142 |
| 25 |
decimalLatitude,,,85 |
|
| 26 |
verbatimTaxonRank,,,152 |
|
| 27 |
earliestEraOrLowestErathem,,,103 |
|
| 28 |
verbatimCoordinates,,,80 |
|
| 30 |
order,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Order]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,145 |
|
| 31 |
specificEpithet,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,149 |
|
| 32 |
phylum,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,143 |
|
| 33 |
occurrenceID,"/{aggregateoccurrence/*_id/plantobservation/authorplantcode,specimenreplicate:[*_id/reference]/sourceaccessioncode}","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
|
|
| 34 |
acceptedNameUsage,,,135 |
|
| 29 | 35 |
acceptedNameUsageID,,,128 |
| 30 |
infraspecificEpithet,,,150 |
|
| 31 |
namePublishedIn,,,139 |
|
| 32 |
originalNameUsage,,,137 |
|
| 33 |
nameAccordingToID,,,131 |
|
| 36 |
associatedMedia,,,36 |
|
| 37 |
associatedOccurrences,,,38 |
|
| 38 |
associatedReferences,,,37 |
|
| 39 |
associatedSequences,,,39 |
|
| 40 |
associatedTaxa,,,40 |
|
| 41 |
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15 |
|
| 42 |
bed,,,117 |
|
| 43 |
behavior,,,29 |
|
| 44 |
catalogNumber,,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20 |
|
| 45 |
collectionID,,,9 |
|
| 46 |
continent,,Brad: OMIT,59 |
|
| 47 |
coordinateUncertaintyInMeters,,,88 |
|
| 48 |
countryCode,,,64 |
|
| 34 | 49 |
dataGeneralizations,,,17 |
| 35 |
nomenclaturalStatus,,,157 |
|
| 50 |
datasetID,,,10 |
|
| 51 |
datasetName,,,13 |
|
| 52 |
day,,Brad: OMIT,50 |
|
| 53 |
dcterms:accessRights,,,5 |
|
| 36 | 54 |
dcterms:bibliographicCitation,,,6 |
| 37 |
recordNumber,,,22 |
|
| 38 |
day,,Brad: OMIT,50 |
|
| 39 |
individualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25 |
|
| 55 |
dcterms:language,,,2 |
|
| 56 |
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1 |
|
| 57 |
dcterms:references,,,7 |
|
| 58 |
dcterms:rights,,,3 |
|
| 59 |
dcterms:rightsHolder,,,4 |
|
| 40 | 60 |
dcterms:type,,,0 |
| 41 |
measurementType,,,167 |
|
| 42 |
institutionID,,,8 |
|
| 43 |
georeferenceVerificationStatus,,,98 |
|
| 44 |
lifeStage,,,27 |
|
| 45 |
measurementUnit,,,170 |
|
| 46 |
locationRemarks,,,79 |
|
| 47 |
scientificName,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname/_alt/1","Brad: Bob, Nick, please is this mapping OK?",134 |
|
| 48 |
parentNameUsage,,,136 |
|
| 49 |
datasetID,,,10 |
|
| 61 |
decimalLatitude,,,85 |
|
| 62 |
decimalLongitude,,,86 |
|
| 63 |
disposition,,,33 |
|
| 64 |
dynamicProperties,,,18 |
|
| 65 |
earliestAgeOrLowestStage,,,109 |
|
| 66 |
earliestEonOrLowestEonothem,,,101 |
|
| 67 |
earliestEpochOrLowestSeries,,,107 |
|
| 68 |
earliestEraOrLowestErathem,,,103 |
|
| 69 |
earliestPeriodOrLowestSystem,,,105 |
|
| 70 |
endDayOfYear,,,47 |
|
| 71 |
establishmentMeans,,,30 |
|
| 50 | 72 |
eventID,,,41 |
| 51 |
lowestBiostratigraphicZone,,,111 |
|
| 52 |
habitat,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=habitat]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52 |
|
| 53 |
higherGeographyID,,,57 |
|
| 54 |
dcterms:references,,,7 |
|
| 55 |
sex,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]]:[@fkey=tableRecord_ID]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26 |
|
| 56 |
dcterms:accessRights,,,5 |
|
| 57 |
scientificNameAuthorship,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153 |
|
| 58 |
associatedTaxa,,,40 |
|
| 59 |
year,,,48 |
|
| 60 |
taxonRemarks,,,158 |
|
| 61 |
dcterms:rightsHolder,,,4 |
|
| 62 |
namePublishedInYear,,,140 |
|
| 63 |
identificationVerificationStatus,,,122 |
|
| 73 |
eventRemarks,,,55 |
|
| 64 | 74 |
eventTime,,Brad: OMIT,45 |
| 65 |
basisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15 |
|
| 66 |
latestEonOrHighestEonothem,,,102 |
|
| 67 |
otherCatalogNumbers,,,34 |
|
| 75 |
footprintSRS,,,92 |
|
| 76 |
footprintSpatialFit,,,93 |
|
| 77 |
footprintWKT,,,91 |
|
| 78 |
formation,,,115 |
|
| 79 |
geodeticDatum,,,87 |
|
| 80 |
geologicalContextID,,,100 |
|
| 81 |
georeferenceProtocol,,,96 |
|
| 68 | 82 |
georeferenceRemarks,,,99 |
| 69 |
acceptedNameUsage,,,135 |
|
| 70 | 83 |
georeferenceSources,,,97 |
| 71 |
specificEpithet,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,149 |
|
| 72 |
verbatimLocality,/*_id/locationevent/*_id/location/locationplace/*_id/namedplace/placedescription,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69 |
|
| 84 |
georeferenceVerificationStatus,,,98 |
|
| 85 |
georeferencedDate,,,95 |
|
| 86 |
group,,,114 |
|
| 87 |
higherClassification,,,141 |
|
| 88 |
higherGeography,,,58 |
|
| 89 |
higherGeographyID,,,57 |
|
| 90 |
highestBiostratigraphicZone,,,112 |
|
| 91 |
identificationID,,,118 |
|
| 92 |
identificationQualifier,,,124 |
|
| 73 | 93 |
identificationReferences,,,121 |
| 94 |
identificationRemarks,,,123 |
|
| 95 |
identificationVerificationStatus,,,122 |
|
| 96 |
individualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25 |
|
| 97 |
informationWithheld,,,16 |
|
| 98 |
infraspecificEpithet,,,150 |
|
| 99 |
institutionID,,,8 |
|
| 100 |
island,,,62 |
|
| 101 |
islandGroup,,,61 |
|
| 102 |
latestAgeOrHighestStage,,,110 |
|
| 103 |
latestEonOrHighestEonothem,,,102 |
|
| 104 |
latestEpochOrHighestSeries,,,108 |
|
| 105 |
latestEraOrHighestErathem,,,104 |
|
| 106 |
latestPeriodOrHighestSystem,,,106 |
|
| 107 |
lifeStage,,,27 |
|
| 108 |
lithostratigraphicTerms,,,113 |
|
| 109 |
locality,,,68 |
|
| 110 |
locationAccordingTo,,,78 |
|
| 111 |
locationID,,,56 |
|
| 112 |
locationRemarks,,,79 |
|
| 113 |
lowestBiostratigraphicZone,,,111 |
|
| 114 |
maximumDistanceAboveSurfaceInMeters,,,77 |
|
| 115 |
measurementAccuracy,,,169 |
|
| 116 |
measurementDeterminedBy,,,172 |
|
| 117 |
measurementDeterminedDate,,,171 |
|
| 118 |
measurementID,,,166 |
|
| 119 |
measurementMethod,,,173 |
|
| 74 | 120 |
measurementRemarks,,,174 |
| 75 |
georeferencedBy,/specimenreplicate:[*_id/reference]/verbatimcollectorname,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94 |
|
| 76 |
geodeticDatum,,,87 |
|
| 121 |
measurementType,,,167 |
|
| 122 |
measurementUnit,,,170 |
|
| 123 |
measurementValue,,,168 |
|
| 124 |
member,,,116 |
|
| 125 |
minimumDistanceAboveSurfaceInMeters,,,76 |
|
| 126 |
month,,,49 |
|
| 127 |
municipality,,,67 |
|
| 128 |
nameAccordingTo,,,138 |
|
| 129 |
nameAccordingToID,,,131 |
|
| 130 |
namePublishedIn,,,139 |
|
| 131 |
namePublishedInID,,,132 |
|
| 132 |
namePublishedInYear,,,140 |
|
| 133 |
nomenclaturalCode,,,155 |
|
| 134 |
nomenclaturalStatus,,,157 |
|
| 77 | 135 |
occurrenceRemarks,,,21 |
| 78 |
collectionCode,"/specimenreplicate:[*_id/reference]/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
|
|
| 79 |
higherGeography,,,58 |
|
| 80 |
nameAccordingTo,,,138 |
|
| 81 |
latestAgeOrHighestStage,,,110 |
|
| 82 |
fieldNumber,/specimenreplicate:[*_id/reference]/catalognumber_dwc,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53 |
|
| 83 |
measurementMethod,,,173 |
|
| 84 |
disposition,,,33 |
|
| 85 |
earliestEpochOrLowestSeries,,,107 |
|
| 86 |
group,,,114 |
|
| 87 |
highestBiostratigraphicZone,,,112 |
|
| 136 |
occurrenceStatus,,,31 |
|
| 137 |
originalNameUsage,,,137 |
|
| 138 |
originalNameUsageID,,,130 |
|
| 139 |
otherCatalogNumbers,,,34 |
|
| 88 | 140 |
ownerInstitutionCode,,,14 |
| 89 |
scientificNameID,,,127 |
|
| 141 |
parentNameUsage,,,136 |
|
| 142 |
parentNameUsageID,,,129 |
|
| 143 |
pointRadiusSpatialFit,,,90 |
|
| 144 |
preparations,,Brad: OMIT,32 |
|
| 145 |
previousIdentifications,,Brad: OMIT,35 |
|
| 146 |
recordNumber,,,22 |
|
| 147 |
recordedBy,,,23 |
|
| 148 |
relatedResourceID,,Brad: OMIT,161 |
|
| 149 |
relationshipAccordingTo,,,163 |
|
| 90 | 150 |
relationshipEstablishedDate,,,164 |
| 91 |
earliestAgeOrLowestStage,,,109 |
|
| 92 |
country,"/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63 |
|
| 93 |
measurementDeterminedBy,,,172 |
|
| 94 |
decimalLongitude,,,86 |
|
| 95 |
locationID,,,56 |
|
| 96 |
dcterms:rights,,,3 |
|
| 151 |
relationshipOfResource,,Brad: OMIT,162 |
|
| 97 | 152 |
relationshipRemarks,,,165 |
| 153 |
reproductiveCondition,,,28 |
|
| 154 |
resourceID,,,160 |
|
| 155 |
resourceRelationshipID,,,159 |
|
| 156 |
samplingEffort,,,43 |
|
| 157 |
samplingProtocol,,,42 |
|
| 158 |
scientificNameID,,,127 |
|
| 98 | 159 |
startDayOfYear,,,46 |
| 99 |
formation,,,115 |
|
| 100 |
genus,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,147 |
|
| 101 |
family,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,146 |
|
| 102 |
collectionID,,,9 |
|
| 103 |
dynamicProperties,,,18 |
|
| 104 |
eventRemarks,,,55 |
|
| 105 |
municipality,,,67 |
|
| 106 |
individualID,/specimenreplicate:[*_id/reference]/collectornumber_dwc,"Brad: OMIT; db-specific element, not relevant to VB/VX",24 |
|
| 107 |
footprintWKT,,,91 |
|
| 108 |
county,/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=county])/placename,,66 |
|
| 109 |
associatedMedia,,,36 |
|
| 110 |
associatedSequences,,,39 |
|
| 111 | 160 |
subgenus,,,148 |
| 112 |
footprintSpatialFit,,,93 |
|
| 113 |
measurementValue,,,168 |
|
| 114 |
higherClassification,,,141 |
|
| 115 |
islandGroup,,,61 |
|
| 116 |
resourceID,,,160 |
|
| 117 |
class,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Class]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,144 |
|
| 118 |
verbatimSRS,,,84 |
|
| 119 |
associatedOccurrences,,,38 |
|
| 120 |
catalogNumber,,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20 |
|
| 121 |
verbatimLongitude,/*_id/locationevent/*_id/location/reallongitude,,82 |
|
| 122 |
preparations,,Brad: OMIT,32 |
|
| 161 |
taxonConceptID,,,133 |
|
| 123 | 162 |
taxonID,,,126 |
| 124 |
nomenclaturalCode,,,155 |
|
| 125 |
maximumElevationInMeters,"/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
|
|
| 163 |
taxonRank,,,151 |
|
| 164 |
taxonRemarks,,,158 |
|
| 165 |
taxonomicStatus,,,156 |
|
| 166 |
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125 |
|
| 126 | 167 |
verbatimCoordinateSystem,,,83 |
| 127 |
measurementID,,,166 |
|
| 128 |
relatedResourceID,,Brad: OMIT,161 |
|
| 129 |
datasetName,,,13 |
|
| 130 |
earliestEonOrLowestEonothem,,,101 |
|
| 131 |
measurementAccuracy,,,169 |
|
| 168 |
verbatimCoordinates,,,80 |
|
| 132 | 169 |
verbatimDepth,,,73 |
| 133 |
bed,,,117 |
|
| 134 |
georeferencedDate,,,95 |
|
| 135 |
behavior,,,29 |
|
| 136 |
island,,,62 |
|
| 137 |
parentNameUsageID,,,129 |
|
| 138 |
minimumElevationInMeters,"/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
|
|
| 139 |
occurrenceStatus,,,31 |
|
| 140 |
vernacularName,,,154 |
|
| 141 |
pointRadiusSpatialFit,,,90 |
|
| 142 |
countryCode,,,64 |
|
| 143 |
phylum,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,143 |
|
| 144 |
institutionCode,/specimenreplicate:[*_id/reference]/{museum_id/party/organizationname/_name/first},,11
|
|
| 145 |
identificationQualifier,,,124 |
|
| 146 |
namePublishedInID,,,132 |
|
| 147 |
identifiedBy,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
|
|
| 148 |
earliestPeriodOrLowestSystem,,,105 |
|
| 149 |
minimumDistanceAboveSurfaceInMeters,,,76 |
|
| 150 |
dcterms:language,,,2 |
|
| 151 |
maximumDistanceAboveSurfaceInMeters,,,77 |
|
| 152 |
taxonConceptID,,,133 |
|
| 153 |
georeferenceProtocol,,,96 |
|
| 154 |
locality,,,68 |
|
| 155 |
associatedReferences,,,37 |
|
| 156 |
stateProvince,"/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65 |
|
| 157 |
taxonomicStatus,,,156 |
|
| 158 |
relationshipAccordingTo,,,163 |
|
| 159 |
member,,,116 |
|
| 160 |
relationshipOfResource,,Brad: OMIT,162 |
|
| 161 |
taxonRank,,,151 |
|
| 162 |
previousIdentifications,,Brad: OMIT,35 |
|
| 163 |
samplingEffort,,,43 |
|
| 164 | 170 |
verbatimElevation,,,70 |
| 165 |
establishmentMeans,,,30 |
|
| 166 |
typeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125 |
|
| 167 |
samplingProtocol,,,42 |
|
| 168 |
originalNameUsageID,,,130 |
|
| 169 |
eventDate,/*_id/locationevent/obsstartdate/_*/date,,44 |
|
| 170 |
geologicalContextID,,,100 |
|
| 171 |
fieldNotes,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,iscurrent=true]/notes","Brad: mapping OK; NY appears to be using this field for almost anything, but mostly internal collections notes",54 |
|
| 172 |
dateIdentified,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_*/date",,120 |
|
| 173 | 171 |
verbatimEventDate,,,51 |
| 174 |
recordedBy,,,23 |
|
| 175 |
dcterms:modified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1 |
|
| 176 |
order,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Order]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,145 |
|
| 172 |
verbatimSRS,,,84 |
|
| 173 |
verbatimTaxonRank,,,152 |
|
| 174 |
vernacularName,,,154 |
|
| 175 |
waterBody,,,60 |
|
| 176 |
year,,,48 |
|
Also available in: Unified diff
mappings/DwC-VegBIEN.organisms.csv: Sort on output column