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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 7326 about 12 years Aaron Marcuse-Kubitza backups/Makefile: %.md5/test: Added comment to ...
  bin 7419 almost 12 years Aaron Marcuse-Kubitza import_all: after_import(): Added wait on tnrs....
  config 7390 almost 12 years Aaron Marcuse-Kubitza config/: Set svn:ignore to exclude *password files
  inputs 7414 almost 12 years Aaron Marcuse-Kubitza Added inputs/FIA/_src/FIADB_version4.accdb and ...
  lib 7397 almost 12 years Aaron Marcuse-Kubitza xml_dom.py: replace_with_text(): Added support ...
  mappings 7409 almost 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Also include morp...
  schemas 7421 almost 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: analytical_stem_view: scie...
  to_do 7355 about 12 years Aaron Marcuse-Kubitza to_do/timeline.2013.xls: Updated with changes d...
  validation 5971 about 12 years Aaron Marcuse-Kubitza Updated validation/BIEN2_Analytical_DB_overview...
Makefile 11.8 KB 7268 about 12 years Aaron Marcuse-Kubitza root Makefile: Datasources: import: Use new imp...
README.TXT 18 KB 7410 almost 12 years Aaron Marcuse-Kubitza README.TXT: Full database import: Updated time ...
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 about 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
unmapped_terms.csv 13.1 KB 7201 about 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
7421 02/02/2013 11:56 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_stem_view: scientificNameWithMorphospecies: Removed no longer needed canon_taxonverbatim.family alternative, since the family will be included in the canon_taxonlabel.taxonomicname by the mappings
7420 02/02/2013 11:49 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_stem_view: scientificNameWithMorphospecies: Fixed bug where need to use canon_*taxonlabel*.taxonomicname instead of canon_taxonverbatim.taxonomicname as one of the alternatives because only canon_taxonlabel.taxonomicname is guaranteed to be populated by the mappings, while canon_taxonverbatim.taxonomicname will only be populated if the datasource explicitly specifies that field. This distinction is only meaningful for data without a TNRS match, as TNRS supplies canon_taxonverbatim.taxonomicname.
7419 02/02/2013 11:28 AM Aaron Marcuse-Kubitza

import_all: after_import(): Added wait on tnrs.make's lockfile to ensure that all background scrubbing processes are complete before creating the analytical DB
7418 02/02/2013 11:18 AM Aaron Marcuse-Kubitza

import_all: Moved `waitpid $jobs` into after_import()
7417 02/01/2013 04:57 PM Aaron Marcuse-Kubitza

schemas/vegbien.ERD.mwb: Fixed table sizes
7416 02/01/2013 04:51 PM Aaron Marcuse-Kubitza

schemas/vegbien.ERD.mwb: Regenerated exports
7415 02/01/2013 04:34 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: removed all accessioncode fields, as VegBIEN does not use them
7414 02/01/2013 03:10 PM Aaron Marcuse-Kubitza

Added inputs/FIA/_src/FIADB_version4.accdb and FIADB_version4.sql (created from it using Access To PostgreSQL and the additional transformations at <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/Tools#MS-Access-database-MDB&gt;)
7413 01/31/2013 08:20 PM Aaron Marcuse-Kubitza

Added inputs/FIA/COND_unique/, generated from new FIA data
7412 01/31/2013 08:05 PM Aaron Marcuse-Kubitza

inputs/FIA/FIA_COND_unique/create.sql: Fixed bug where need to remove `CREATE TABLE :table AS` at beginning because that is added by the make target

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