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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 7326 almost 12 years Aaron Marcuse-Kubitza backups/Makefile: %.md5/test: Added comment to ...
  bin 7424 almost 12 years Aaron Marcuse-Kubitza bin/: svn:ignore: Removed no longer applicable ...
  config 7390 almost 12 years Aaron Marcuse-Kubitza config/: Set svn:ignore to exclude *password files
  inputs 7414 almost 12 years Aaron Marcuse-Kubitza Added inputs/FIA/_src/FIADB_version4.accdb and ...
  lib 7397 almost 12 years Aaron Marcuse-Kubitza xml_dom.py: replace_with_text(): Added support ...
  mappings 7409 almost 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Also include morp...
  schemas 7421 almost 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: analytical_stem_view: scie...
  to_do 7355 almost 12 years Aaron Marcuse-Kubitza to_do/timeline.2013.xls: Updated with changes d...
  validation 5971 about 12 years Aaron Marcuse-Kubitza Updated validation/BIEN2_Analytical_DB_overview...
Makefile 11.9 KB 7423 almost 12 years Aaron Marcuse-Kubitza root Makefile: misc-Linux: Added command to cop...
README.TXT 18 KB 7410 almost 12 years Aaron Marcuse-Kubitza README.TXT: Full database import: Updated time ...
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
7424 02/02/2013 01:30 PM Aaron Marcuse-Kubitza

bin/: svn:ignore: Removed no longer applicable test_output
7423 02/02/2013 01:26 PM Aaron Marcuse-Kubitza

root Makefile: misc-Linux: Added command to copy dotlockfile to the bin/ dir, so that it can be used without being SETGID mail, which would prevent it from creating lockfiles in a directory owned by the bien user and group when being run by the user
7422 02/02/2013 01:24 PM Aaron Marcuse-Kubitza

root Makefile: core: Added misc-* to install other dependencies
7421 02/02/2013 11:56 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_stem_view: scientificNameWithMorphospecies: Removed no longer needed canon_taxonverbatim.family alternative, since the family will be included in the canon_taxonlabel.taxonomicname by the mappings
7420 02/02/2013 11:49 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_stem_view: scientificNameWithMorphospecies: Fixed bug where need to use canon_*taxonlabel*.taxonomicname instead of canon_taxonverbatim.taxonomicname as one of the alternatives because only canon_taxonlabel.taxonomicname is guaranteed to be populated by the mappings, while canon_taxonverbatim.taxonomicname will only be populated if the datasource explicitly specifies that field. This distinction is only meaningful for data without a TNRS match, as TNRS supplies canon_taxonverbatim.taxonomicname.
7419 02/02/2013 11:28 AM Aaron Marcuse-Kubitza

import_all: after_import(): Added wait on tnrs.make's lockfile to ensure that all background scrubbing processes are complete before creating the analytical DB
7418 02/02/2013 11:18 AM Aaron Marcuse-Kubitza

import_all: Moved `waitpid $jobs` into after_import()
7417 02/01/2013 04:57 PM Aaron Marcuse-Kubitza

schemas/vegbien.ERD.mwb: Fixed table sizes
7416 02/01/2013 04:51 PM Aaron Marcuse-Kubitza

schemas/vegbien.ERD.mwb: Regenerated exports
7415 02/01/2013 04:34 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: removed all accessioncode fields, as VegBIEN does not use them

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