Revision 7521
Added by Aaron Marcuse-Kubitza almost 12 years ago
| mappings/VegCore.vocab.csv | ||
|---|---|---|
| 1 | 1 |
VegCore |
| 2 |
ID |
|
| 2 | 3 |
OMIT |
| 3 | 4 |
PRIVATE |
| 4 | 5 |
UNUSED |
| 6 |
abund10cm |
|
| 7 |
abund1cm |
|
| 8 |
abund2_5cm |
|
| 5 | 9 |
acceptedClass |
| 6 | 10 |
acceptedCountry |
| 7 | 11 |
acceptedCounty |
| ... | ... | |
| 28 | 32 |
acceptedTaxonRank |
| 29 | 33 |
acceptedVariety |
| 30 | 34 |
accessRights |
| 35 |
accession |
|
| 36 |
accessionNumber |
|
| 37 |
accordingTo |
|
| 31 | 38 |
acidity_fraction |
| 32 | 39 |
acidity_percent |
| 40 |
aggregateOccurrenceID |
|
| 33 | 41 |
aggregateOrganismObservationID |
| 42 |
aggregatorOrPrimary |
|
| 43 |
annotations |
|
| 34 | 44 |
associatedMedia |
| 35 | 45 |
associatedOccurrences |
| 36 | 46 |
associatedReferences |
| 37 | 47 |
associatedSequences |
| 38 | 48 |
associatedTaxa |
| 39 | 49 |
authorEventCode |
| 50 |
authorObsCode |
|
| 51 |
authorPlantCode |
|
| 52 |
authorPlantName |
|
| 53 |
authorPlotCode |
|
| 40 | 54 |
authorStemCode |
| 41 | 55 |
authorTaxonCode |
| 42 | 56 |
barcode |
| ... | ... | |
| 49 | 63 |
bed |
| 50 | 64 |
behavior |
| 51 | 65 |
bibliographicCitation |
| 66 |
boundingBox |
|
| 52 | 67 |
calcium_fraction |
| 53 | 68 |
calcium_percent |
| 54 | 69 |
canopyForm |
| ... | ... | |
| 58 | 73 |
catalogNumber |
| 59 | 74 |
cationExchangeCapacity_cmol_kg |
| 60 | 75 |
cationExchangeCapacity_meq_100g |
| 76 |
censusID |
|
| 77 |
censusNo |
|
| 61 | 78 |
censusNumber |
| 79 |
cf_aff |
|
| 62 | 80 |
class |
| 63 | 81 |
clay_fraction |
| 64 | 82 |
clay_percent |
| 83 |
collectedDate |
|
| 65 | 84 |
collectionCode |
| 66 | 85 |
collectionID |
| 86 |
collector |
|
| 87 |
collectorNumber |
|
| 88 |
communityConceptName |
|
| 67 | 89 |
communityID |
| 68 | 90 |
communityName |
| 69 | 91 |
conductivity |
| 70 | 92 |
continent |
| 93 |
continentOcean |
|
| 71 | 94 |
coordinatePrecision_deg |
| 72 | 95 |
coordinateSource |
| 96 |
coordinateSource_bien |
|
| 73 | 97 |
coordinateUncertaintyInMeters |
| 74 | 98 |
country |
| 75 | 99 |
countryCode |
| 100 |
countryName |
|
| 76 | 101 |
county |
| 77 | 102 |
coverPercent |
| 78 | 103 |
cultivar |
| 79 | 104 |
cultivated |
| 80 | 105 |
cultivatedBasis |
| 106 |
cultivatedBasis_bien |
|
| 107 |
cultivated_bien |
|
| 108 |
cv |
|
| 81 | 109 |
dataGeneralizations |
| 110 |
dataset |
|
| 82 | 111 |
datasetID |
| 83 | 112 |
datasetName |
| 84 | 113 |
datasetRecordID |
| 85 | 114 |
datasource |
| 115 |
datasourceName |
|
| 86 | 116 |
datasourceRecordID |
| 87 | 117 |
dateCollected |
| 88 | 118 |
dateIdentified |
| 119 |
dateLastModified |
|
| 89 | 120 |
day |
| 90 | 121 |
dayCollected |
| 91 | 122 |
dayIdentified |
| 123 |
dcterms_accessRights |
|
| 124 |
dcterms_bibliographicCitation |
|
| 125 |
dcterms_language |
|
| 126 |
dcterms_modified |
|
| 127 |
dcterms_references |
|
| 128 |
dcterms_rights |
|
| 129 |
dcterms_rightsHolder |
|
| 130 |
dcterms_type |
|
| 92 | 131 |
decimalLatitude |
| 93 | 132 |
decimalLongitude |
| 133 |
descriptionOfSite |
|
| 134 |
detType |
|
| 94 | 135 |
diameterBreastHeightGentry_cm |
| 95 | 136 |
diameterBreastHeightGentry_in |
| 96 | 137 |
diameterBreastHeightGentry_m |
| ... | ... | |
| 118 | 159 |
eventRemarks |
| 119 | 160 |
eventTime |
| 120 | 161 |
family |
| 162 |
familyScore |
|
| 163 |
fieldNotes_DwC_curatorial |
|
| 164 |
fieldNotes_DwC_terms |
|
| 165 |
fieldNumber_DwC_classic |
|
| 166 |
fieldNumber_DwC_terms |
|
| 167 |
fm |
|
| 121 | 168 |
footprintSRS |
| 122 | 169 |
footprintSpatialFit |
| 123 | 170 |
footprintWKT |
| 124 | 171 |
forma |
| 125 | 172 |
formation |
| 126 | 173 |
genus |
| 174 |
genusScore |
|
| 127 | 175 |
geodeticDatum |
| 128 | 176 |
geologicalContextID |
| 129 | 177 |
georeferenceProtocol |
| 178 |
georeferenceProtocol_bien |
|
| 130 | 179 |
georeferenceRemarks |
| 131 | 180 |
georeferenceSources |
| 132 | 181 |
georeferenceVerificationStatus |
| 133 | 182 |
georeferencedBy |
| 134 | 183 |
georeferencedDate |
| 135 | 184 |
geovalid |
| 185 |
globalUniqueIdentifier_DwC |
|
| 186 |
globalUniqueIdentifier_SpeciesLink |
|
| 136 | 187 |
group |
| 137 | 188 |
growthForm |
| 189 |
habit |
|
| 138 | 190 |
habitat |
| 139 | 191 |
heightFirstBranch_ft |
| 140 | 192 |
heightFirstBranch_m |
| ... | ... | |
| 144 | 196 |
higherGeography |
| 145 | 197 |
higherGeographyID |
| 146 | 198 |
higherPlantGroup |
| 199 |
higherPlantGroup_bien |
|
| 147 | 200 |
highestBiostratigraphicZone |
| 201 |
htFirstBranch_m |
|
| 148 | 202 |
identificationID |
| 203 |
identificationLabel |
|
| 149 | 204 |
identificationQualifier |
| 150 | 205 |
identificationReferences |
| 151 | 206 |
identificationRemarks |
| 152 | 207 |
identificationType |
| 153 | 208 |
identificationVerificationStatus |
| 154 | 209 |
identifiedBy |
| 210 |
identifiedDate |
|
| 155 | 211 |
individualCode |
| 156 | 212 |
individualCount |
| 157 | 213 |
individualCount_10cm_or_more |
| ... | ... | |
| 159 | 215 |
individualCount_2_5cm_or_more |
| 160 | 216 |
individualID |
| 161 | 217 |
individualObservationID |
| 218 |
individualOrganismObservationID |
|
| 219 |
individualOrganismObservationRelativeX |
|
| 220 |
individualOrganismObservationRelativeY |
|
| 162 | 221 |
informationWithheld |
| 163 | 222 |
infraspecificEpithet |
| 164 | 223 |
institutionCode |
| 165 | 224 |
institutionID |
| 166 | 225 |
intercept_cm |
| 167 | 226 |
intercept_m |
| 227 |
interpretationType |
|
| 228 |
isBadLatLong |
|
| 229 |
isGeovalid |
|
| 168 | 230 |
isHerbarium |
| 231 |
isInCountry |
|
| 232 |
isInCountyParish |
|
| 233 |
isInStateProvince |
|
| 169 | 234 |
isNewWorld |
| 235 |
isNewWorld_bien |
|
| 236 |
isValidLatLong |
|
| 170 | 237 |
island |
| 171 | 238 |
islandGroup |
| 239 |
julianDay |
|
| 172 | 240 |
kingdom |
| 173 | 241 |
landform |
| 174 | 242 |
language |
| ... | ... | |
| 182 | 250 |
latestEpochOrHighestSeries |
| 183 | 251 |
latestEraOrHighestErathem |
| 184 | 252 |
latestPeriodOrHighestSystem |
| 253 |
latitude |
|
| 185 | 254 |
latitude_DMS |
| 186 | 255 |
lianaInfestation |
| 187 | 256 |
lifeStage |
| ... | ... | |
| 190 | 259 |
locationAccordingTo |
| 191 | 260 |
locationID |
| 192 | 261 |
locationName |
| 262 |
locationNarrative |
|
| 263 |
locationNumber |
|
| 193 | 264 |
locationRemarks |
| 265 |
longitude |
|
| 194 | 266 |
longitude_DMS |
| 195 | 267 |
lowestBiostratigraphicZone |
| 196 | 268 |
magnesium_fraction |
| ... | ... | |
| 213 | 285 |
measurementMethod |
| 214 | 286 |
measurementName |
| 215 | 287 |
measurementRemarks |
| 288 |
measurementType |
|
| 216 | 289 |
measurementUnit |
| 217 | 290 |
measurementValue |
| 218 | 291 |
member |
| 292 |
method |
|
| 293 |
methodology |
|
| 219 | 294 |
minSlopeAspect |
| 220 | 295 |
minSlopeGradient |
| 221 | 296 |
minimumDepthInMeters |
| ... | ... | |
| 230 | 305 |
morphoname |
| 231 | 306 |
morphospecies |
| 232 | 307 |
municipality |
| 308 |
museumAccessionNumber |
|
| 233 | 309 |
nameAccordingTo |
| 234 | 310 |
nameAccordingToID |
| 235 | 311 |
namePublishedIn |
| ... | ... | |
| 239 | 315 |
nitrogen_percent |
| 240 | 316 |
nomenclaturalCode |
| 241 | 317 |
nomenclaturalStatus |
| 318 |
notes_Madidi |
|
| 319 |
notes_SALVIAS |
|
| 320 |
obsEndDate |
|
| 321 |
obsStartDate |
|
| 242 | 322 |
observationGranularity |
| 243 | 323 |
observationMeasure |
| 324 |
observationType_BIEN2 |
|
| 325 |
observationType_SALVIAS |
|
| 244 | 326 |
occurrenceID |
| 245 | 327 |
occurrenceRemarks |
| 246 | 328 |
occurrenceStatus |
| ... | ... | |
| 271 | 353 |
originalTaxonRank |
| 272 | 354 |
originalVariety |
| 273 | 355 |
otherCatalogNumbers |
| 356 |
overallScore |
|
| 274 | 357 |
ownerInstitutionCode |
| 275 | 358 |
parentLocationID |
| 276 | 359 |
parentNameUsage |
| ... | ... | |
| 280 | 363 |
parentTaxonConceptID |
| 281 | 364 |
parentTaxonID |
| 282 | 365 |
ph |
| 366 |
phenology |
|
| 283 | 367 |
phosphorus_fraction |
| 284 | 368 |
phosphorus_percent |
| 285 | 369 |
phylum |
| 286 | 370 |
plotArea_ha |
| 287 | 371 |
plotArea_m2 |
| 372 |
plotCensusNumber |
|
| 373 |
plotID |
|
| 374 |
plotMethodology |
|
| 375 |
plotName |
|
| 376 |
plotNote |
|
| 377 |
plotNotes |
|
| 378 |
plotRelativeX |
|
| 379 |
plotRelativeY |
|
| 380 |
plotUniqueIdentifierID |
|
| 288 | 381 |
pointRadiusSpatialFit |
| 289 | 382 |
potassium_fraction |
| 290 | 383 |
potassium_percent |
| 384 |
pottasium |
|
| 385 |
precip_mm |
|
| 291 | 386 |
precipitation_m |
| 292 | 387 |
precipitation_mm |
| 388 |
preparation |
|
| 389 |
preparationType |
|
| 293 | 390 |
preparations |
| 391 |
previousCatalogNumber |
|
| 294 | 392 |
previousIdentifications |
| 295 | 393 |
projectEndDate |
| 296 | 394 |
projectID |
| 297 | 395 |
projectName |
| 298 | 396 |
projectStartDate |
| 397 |
projectTitle |
|
| 398 |
quadratID |
|
| 399 |
quadratName |
|
| 299 | 400 |
realLatitude |
| 300 | 401 |
realLongitude |
| 301 | 402 |
recordNumber |
| ... | ... | |
| 305 | 406 |
recordedBy_surName |
| 306 | 407 |
referenceType |
| 307 | 408 |
references |
| 409 |
relatedCatalogItem |
|
| 308 | 410 |
relatedResourceID |
| 309 | 411 |
relationshipAccordingTo |
| 310 | 412 |
relationshipEstablishedDate |
| 311 | 413 |
relationshipOfResource |
| 312 | 414 |
relationshipRemarks |
| 415 |
relationshipType |
|
| 416 |
remarks |
|
| 313 | 417 |
reproductiveCondition |
| 314 | 418 |
resourceID |
| 315 | 419 |
resourceRelationshipID |
| ... | ... | |
| 321 | 425 |
sand_fraction |
| 322 | 426 |
sand_percent |
| 323 | 427 |
scientificName |
| 428 |
scientificNameAuthor |
|
| 324 | 429 |
scientificNameAuthorship |
| 325 | 430 |
scientificNameID |
| 326 | 431 |
sex |
| 432 |
shapeOfSite |
|
| 327 | 433 |
silt_fraction |
| 328 | 434 |
silt_percent |
| 329 | 435 |
slopeAspect |
| 330 | 436 |
slopeGradient |
| 331 | 437 |
sodium_fraction |
| 332 | 438 |
sodium_percent |
| 439 |
soilConductivity |
|
| 440 |
soilTexture |
|
| 333 | 441 |
speciesBinomial |
| 442 |
speciesInvID |
|
| 443 |
speciesName |
|
| 444 |
species_DwC |
|
| 445 |
species_VegBank |
|
| 334 | 446 |
specificEpithet |
| 447 |
specificEpithetScore |
|
| 448 |
ssp |
|
| 335 | 449 |
startDate |
| 336 | 450 |
startDayOfYear |
| 451 |
startX |
|
| 452 |
startY |
|
| 453 |
state |
|
| 337 | 454 |
stateProvince |
| 455 |
stemCanopyForm |
|
| 456 |
stemCanopyPosition |
|
| 457 |
stemCode |
|
| 338 | 458 |
stemCount |
| 339 | 459 |
stemID |
| 460 |
stemLianaInfestation |
|
| 340 | 461 |
stemNotes |
| 341 | 462 |
stemTag |
| 463 |
stemTag2 |
|
| 342 | 464 |
subgenus |
| 343 | 465 |
subplot |
| 344 | 466 |
subplotID |
| 345 | 467 |
subplotX |
| 346 | 468 |
subplotY |
| 347 | 469 |
subspecies |
| 470 |
subspeciesName |
|
| 348 | 471 |
tag |
| 472 |
tag2 |
|
| 349 | 473 |
taxonConceptID |
| 474 |
taxonFit |
|
| 350 | 475 |
taxonID |
| 476 |
taxonIsAccepted |
|
| 351 | 477 |
taxonIsCanonical |
| 352 | 478 |
taxonName |
| 353 | 479 |
taxonNameOrEpithet |
| 480 |
taxonNameUsageConceptID |
|
| 354 | 481 |
taxonNameWithMorphospecies |
| 355 | 482 |
taxonObservationID |
| 356 | 483 |
taxonOccurrenceID |
| ... | ... | |
| 358 | 485 |
taxonRank |
| 359 | 486 |
taxonRemarks |
| 360 | 487 |
taxonomicStatus |
| 488 |
temp_C |
|
| 361 | 489 |
temperature_C |
| 362 | 490 |
temperature_F |
| 363 | 491 |
texture |
| 364 | 492 |
threatened |
| 493 |
timeOfDay |
|
| 494 |
traitName |
|
| 495 |
traitValue |
|
| 365 | 496 |
type |
| 366 | 497 |
typeStatus |
| 498 |
unit |
|
| 499 |
var |
|
| 367 | 500 |
variety |
| 368 | 501 |
verbatimCoordinateSystem |
| 369 | 502 |
verbatimCoordinates |
| mappings/Makefile | ||
|---|---|---|
| 27 | 27 |
php -r 'fpassthru(fopen("https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore", "r"));' >$@
|
| 28 | 28 |
|
| 29 | 29 |
$(vocab): VegCore.htm |
| 30 |
(echo VegCore; $(sed) -n 's/^<h[2-4][^>]*>(<img [^>]*title="[^"S][^"]*:"[^>]*> *)?<a href="#[^>]*>(([a-z]|[A-Z]{2})[^<]*)<\/a>.*<a href="#[^"-]+".*$$/\2/p'\
|
|
| 30 |
(echo VegCore; $(sed) -n 's/^<h[2-4][^>]*>(<img [^>]*>)? *<a href="#[^>]*>(([a-z]|[A-Z]{2})[^<]*)<\/a>.*<a href="#[^"-]+".*$$/\2/p'\
|
|
| 31 | 31 |
|sort -u) <$< >$@ |
| 32 | 32 |
|
| 33 | 33 |
$(thesaurus): VegCore.htm |
Also available in: Unified diff
mappings/Makefile: VegCore.vocab.csv: Added back synonyms, so that the vocabulary contains all terms defined by VegCore, regardless of whether they are synonyms or primary terms. This also prevents VegCore.vocab.csv from losing entries when terms are renamed, which made it difficult to verify that no terms were lost when refactoring.