Revision 7525
Added by Aaron Marcuse-Kubitza almost 12 years ago
| mappings/VegCore.vocab.csv | ||
|---|---|---|
| 1 | 1 |
VegCore |
| 2 | 2 |
?DBH |
| 3 |
?acidity |
|
| 4 |
?area |
|
| 5 |
?basalDiam |
|
| 6 |
?basalDiameter |
|
| 7 |
?baseSaturation |
|
| 8 |
?calcium |
|
| 9 |
?carbon |
|
| 10 |
?cationExchangeCapacity |
|
| 11 |
?clay |
|
| 12 |
?depth |
|
| 13 |
?diameterBreastHeight |
|
| 14 |
?diameterBreastHeightGentry |
|
| 15 |
?distErrCountry |
|
| 16 |
?distErrStateProvince |
|
| 17 |
?distanceToCountry |
|
| 18 |
?distanceToStateProvince |
|
| 19 |
?elevation |
|
| 20 |
?exchangeCapacity |
|
| 21 |
?fieldNotes |
|
| 22 |
?fieldNumber |
|
| 23 |
?gentryDbh |
|
| 24 |
?globalUniqueIdentifier |
|
| 25 |
?height |
|
| 26 |
?heightFirstBranch |
|
| 27 |
?intercept |
|
| 28 |
?magnesium |
|
| 29 |
?maximumDepth |
|
| 30 |
?maximumElevation |
|
| 31 |
?minimumDepth |
|
| 32 |
?minimumElevation |
|
| 33 |
?nitrogen |
|
| 34 |
?notes |
|
| 35 |
?observationType |
|
| 36 |
?organic |
|
| 37 |
?phosphorus |
|
| 38 |
?plotArea |
|
| 39 |
?potassium |
|
| 40 |
?precipitation |
|
| 41 |
?sand |
|
| 42 |
?silt |
|
| 43 |
?sodium |
|
| 44 |
?soilAcidity |
|
| 45 |
?soilC |
|
| 46 |
?soilCa |
|
| 47 |
?soilCationCap |
|
| 48 |
?soilClay |
|
| 49 |
?soilNa |
|
| 50 |
?soilOrganic |
|
| 51 |
?soilSand |
|
| 52 |
?soilSilt |
|
| 53 |
?species |
|
| 54 |
?stemDbh |
|
| 55 |
?stemHeight |
|
| 56 |
?temperature |
|
| 57 | 3 |
ID |
| 58 | 4 |
OMIT |
| 59 | 5 |
PRIVATE |
| ... | ... | |
| 90 | 36 |
accession |
| 91 | 37 |
accessionNumber |
| 92 | 38 |
accordingTo |
| 39 |
?acidity |
|
| 93 | 40 |
acidity_fraction |
| 94 | 41 |
acidity_percent |
| 95 | 42 |
aggregateOccurrenceID |
| 96 | 43 |
aggregateOrganismObservationID |
| 97 | 44 |
aggregatorOrPrimary |
| 98 | 45 |
annotations |
| 46 |
?area |
|
| 99 | 47 |
associatedMedia |
| 100 | 48 |
associatedOccurrences |
| 101 | 49 |
associatedReferences |
| ... | ... | |
| 109 | 57 |
authorStemCode |
| 110 | 58 |
authorTaxonCode |
| 111 | 59 |
barcode |
| 60 |
?basalDiam |
|
| 61 |
?basalDiameter |
|
| 112 | 62 |
basalDiameter_cm |
| 113 | 63 |
basalDiameter_in |
| 114 | 64 |
basalDiameter_m |
| 65 |
?baseSaturation |
|
| 115 | 66 |
baseSaturation_fraction |
| 116 | 67 |
baseSaturation_percent |
| 117 | 68 |
basisOfRecord |
| ... | ... | |
| 119 | 70 |
behavior |
| 120 | 71 |
bibliographicCitation |
| 121 | 72 |
boundingBox |
| 73 |
?calcium |
|
| 122 | 74 |
calcium_fraction |
| 123 | 75 |
calcium_percent |
| 124 | 76 |
canopyForm |
| 125 | 77 |
canopyPosition |
| 78 |
?carbon |
|
| 126 | 79 |
carbon_fraction |
| 127 | 80 |
carbon_percent |
| 128 | 81 |
catalogNumber |
| 82 |
?cationExchangeCapacity |
|
| 129 | 83 |
cationExchangeCapacity_cmol_kg |
| 130 | 84 |
cationExchangeCapacity_meq_100g |
| 131 | 85 |
censusID |
| ... | ... | |
| 133 | 87 |
censusNumber |
| 134 | 88 |
cf_aff |
| 135 | 89 |
class |
| 90 |
?clay |
|
| 136 | 91 |
clay_fraction |
| 137 | 92 |
clay_percent |
| 138 | 93 |
collectedDate |
| ... | ... | |
| 185 | 140 |
dcterms_type |
| 186 | 141 |
decimalLatitude |
| 187 | 142 |
decimalLongitude |
| 143 |
?depth |
|
| 188 | 144 |
descriptionOfSite |
| 189 | 145 |
detType |
| 146 |
?diameterBreastHeight |
|
| 147 |
?diameterBreastHeightGentry |
|
| 190 | 148 |
diameterBreastHeightGentry_cm |
| 191 | 149 |
diameterBreastHeightGentry_in |
| 192 | 150 |
diameterBreastHeightGentry_m |
| ... | ... | |
| 194 | 152 |
diameterBreastHeight_in |
| 195 | 153 |
diameterBreastHeight_m |
| 196 | 154 |
disposition |
| 155 |
?distErrCountry |
|
| 156 |
?distErrStateProvince |
|
| 197 | 157 |
distanceAboveSurfaceInMeters |
| 158 |
?distanceToCountry |
|
| 198 | 159 |
distanceToCountry_km |
| 199 | 160 |
distanceToCountry_m |
| 161 |
?distanceToStateProvince |
|
| 200 | 162 |
distanceToStateProvince_km |
| 201 | 163 |
distanceToStateProvince_m |
| 202 | 164 |
dynamicProperties |
| ... | ... | |
| 205 | 167 |
earliestEpochOrLowestSeries |
| 206 | 168 |
earliestEraOrLowestErathem |
| 207 | 169 |
earliestPeriodOrLowestSystem |
| 170 |
?elevation |
|
| 208 | 171 |
elevationInMeters |
| 209 | 172 |
endDate |
| 210 | 173 |
endDayOfYear |
| ... | ... | |
| 213 | 176 |
eventID |
| 214 | 177 |
eventRemarks |
| 215 | 178 |
eventTime |
| 179 |
?exchangeCapacity |
|
| 216 | 180 |
family |
| 217 | 181 |
familyScore |
| 182 |
?fieldNotes |
|
| 218 | 183 |
fieldNotes_DwC_curatorial |
| 219 | 184 |
fieldNotes_DwC_terms |
| 185 |
?fieldNumber |
|
| 220 | 186 |
fieldNumber_DwC_classic |
| 221 | 187 |
fieldNumber_DwC_terms |
| 222 | 188 |
fm |
| ... | ... | |
| 225 | 191 |
footprintWKT |
| 226 | 192 |
forma |
| 227 | 193 |
formation |
| 194 |
?gentryDbh |
|
| 228 | 195 |
genus |
| 229 | 196 |
genusScore |
| 230 | 197 |
geodeticDatum |
| ... | ... | |
| 237 | 204 |
georeferencedBy |
| 238 | 205 |
georeferencedDate |
| 239 | 206 |
geovalid |
| 207 |
?globalUniqueIdentifier |
|
| 240 | 208 |
globalUniqueIdentifier_DwC |
| 241 | 209 |
globalUniqueIdentifier_SpeciesLink |
| 242 | 210 |
group |
| 243 | 211 |
growthForm |
| 244 | 212 |
habit |
| 245 | 213 |
habitat |
| 214 |
?height |
|
| 215 |
?heightFirstBranch |
|
| 246 | 216 |
heightFirstBranch_ft |
| 247 | 217 |
heightFirstBranch_m |
| 248 | 218 |
height_ft |
| ... | ... | |
| 277 | 247 |
infraspecificEpithet |
| 278 | 248 |
institutionCode |
| 279 | 249 |
institutionID |
| 250 |
?intercept |
|
| 280 | 251 |
intercept_cm |
| 281 | 252 |
intercept_m |
| 282 | 253 |
interpretationType |
| ... | ... | |
| 320 | 291 |
longitude |
| 321 | 292 |
longitude_DMS |
| 322 | 293 |
lowestBiostratigraphicZone |
| 294 |
?magnesium |
|
| 323 | 295 |
magnesium_fraction |
| 324 | 296 |
magnesium_percent |
| 325 | 297 |
matchedFamilyFit_fraction |
| ... | ... | |
| 328 | 300 |
matchedTaxonFit_fraction |
| 329 | 301 |
maxSlopeAspect |
| 330 | 302 |
maxSlopeGradient |
| 303 |
?maximumDepth |
|
| 331 | 304 |
maximumDepthInMeters |
| 332 | 305 |
maximumDepth_verbatim |
| 333 | 306 |
maximumDistanceAboveSurfaceInMeters |
| 307 |
?maximumElevation |
|
| 334 | 308 |
maximumElevationInMeters |
| 335 | 309 |
maximumElevation_verbatim |
| 336 | 310 |
measurementAccuracy |
| ... | ... | |
| 348 | 322 |
methodology |
| 349 | 323 |
minSlopeAspect |
| 350 | 324 |
minSlopeGradient |
| 325 |
?minimumDepth |
|
| 351 | 326 |
minimumDepthInMeters |
| 352 | 327 |
minimumDepth_verbatim |
| 353 | 328 |
minimumDistanceAboveSurfaceInMeters |
| 329 |
?minimumElevation |
|
| 354 | 330 |
minimumElevationInMeters |
| 355 | 331 |
minimumElevation_verbatim |
| 356 | 332 |
modified |
| ... | ... | |
| 366 | 342 |
namePublishedIn |
| 367 | 343 |
namePublishedInID |
| 368 | 344 |
namePublishedInYear |
| 345 |
?nitrogen |
|
| 369 | 346 |
nitrogen_fraction |
| 370 | 347 |
nitrogen_percent |
| 371 | 348 |
nomenclaturalCode |
| 372 | 349 |
nomenclaturalStatus |
| 350 |
?notes |
|
| 373 | 351 |
notes_Madidi |
| 374 | 352 |
notes_SALVIAS |
| 375 | 353 |
obsEndDate |
| 376 | 354 |
obsStartDate |
| 377 | 355 |
observationGranularity |
| 378 | 356 |
observationMeasure |
| 357 |
?observationType |
|
| 379 | 358 |
observationType_BIEN2 |
| 380 | 359 |
observationType_SALVIAS |
| 381 | 360 |
occurrenceID |
| ... | ... | |
| 383 | 362 |
occurrenceStatus |
| 384 | 363 |
oldGrowth |
| 385 | 364 |
order |
| 365 |
?organic |
|
| 386 | 366 |
organic_fraction |
| 387 | 367 |
organic_percent |
| 388 | 368 |
organismNotes |
| ... | ... | |
| 419 | 399 |
parentTaxonID |
| 420 | 400 |
ph |
| 421 | 401 |
phenology |
| 402 |
?phosphorus |
|
| 422 | 403 |
phosphorus_fraction |
| 423 | 404 |
phosphorus_percent |
| 424 | 405 |
phylum |
| 406 |
?plotArea |
|
| 425 | 407 |
plotArea_ha |
| 426 | 408 |
plotArea_m2 |
| 427 | 409 |
plotCensusNumber |
| ... | ... | |
| 434 | 416 |
plotRelativeY |
| 435 | 417 |
plotUniqueIdentifierID |
| 436 | 418 |
pointRadiusSpatialFit |
| 419 |
?potassium |
|
| 437 | 420 |
potassium_fraction |
| 438 | 421 |
potassium_percent |
| 439 | 422 |
pottasium |
| 440 | 423 |
precip_mm |
| 424 |
?precipitation |
|
| 441 | 425 |
precipitation_m |
| 442 | 426 |
precipitation_mm |
| 443 | 427 |
preparation |
| ... | ... | |
| 477 | 461 |
samplingEffort |
| 478 | 462 |
samplingProtocol |
| 479 | 463 |
samplingProtocolID |
| 464 |
?sand |
|
| 480 | 465 |
sand_fraction |
| 481 | 466 |
sand_percent |
| 482 | 467 |
scientificName |
| ... | ... | |
| 485 | 470 |
scientificNameID |
| 486 | 471 |
sex |
| 487 | 472 |
shapeOfSite |
| 473 |
?silt |
|
| 488 | 474 |
silt_fraction |
| 489 | 475 |
silt_percent |
| 490 | 476 |
slopeAspect |
| 491 | 477 |
slopeGradient |
| 478 |
?sodium |
|
| 492 | 479 |
sodium_fraction |
| 493 | 480 |
sodium_percent |
| 481 |
?soilAcidity |
|
| 482 |
?soilC |
|
| 483 |
?soilCa |
|
| 484 |
?soilCationCap |
|
| 485 |
?soilClay |
|
| 494 | 486 |
soilConductivity |
| 487 |
?soilNa |
|
| 488 |
?soilOrganic |
|
| 489 |
?soilSand |
|
| 490 |
?soilSilt |
|
| 495 | 491 |
soilTexture |
| 492 |
?species |
|
| 496 | 493 |
speciesBinomial |
| 497 | 494 |
speciesInvID |
| 498 | 495 |
speciesName |
| ... | ... | |
| 511 | 508 |
stemCanopyPosition |
| 512 | 509 |
stemCode |
| 513 | 510 |
stemCount |
| 511 |
?stemDbh |
|
| 512 |
?stemHeight |
|
| 514 | 513 |
stemID |
| 515 | 514 |
stemLianaInfestation |
| 516 | 515 |
stemNotes |
| ... | ... | |
| 541 | 540 |
taxonRemarks |
| 542 | 541 |
taxonomicStatus |
| 543 | 542 |
temp_C |
| 543 |
?temperature |
|
| 544 | 544 |
temperature_C |
| 545 | 545 |
temperature_F |
| 546 | 546 |
texture |
| mappings/Makefile | ||
|---|---|---|
| 27 | 27 |
php -r 'fpassthru(fopen("https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/VegCore", "r"));' >$@
|
| 28 | 28 |
|
| 29 | 29 |
$(vocab): VegCore.htm |
| 30 |
(echo VegCore; $(sed) -n 's/^<h[2-4][^>]*>(<img [^>]*>)? *<a href="#[^>]*>(\??([a-z]|[A-Z]{2})[^<]*)<\/a>.*<a href="#[^"-]+".*$$/\2/p'\
|
|
| 31 |
|sort -u) <$< >$@ |
|
| 30 |
(echo VegCore; $(sed) -n 's/^<h[2-4][^>]*>(<img [^>]*>)? *<a href="#[^>]*>(\??([a-z]|[A-Z]{2})[^<]*)<\/a>.*<a href="#[^"-]+".*$$/\2/p') \
|
|
| 31 |
<$< >$@ |
|
| 32 |
$(bin)/in_place $@ $(bin)/sort_ci |
|
| 32 | 33 |
|
| 33 | 34 |
$(thesaurus): VegCore.htm |
| 34 | 35 |
(echo "Veg+,VegCore"; $(bin)/redmine_synonyms|grep -vE '^\??[A-Z][a-z]';\ |
Also available in: Unified diff
mappings/Makefile: VegCore.vocab.csv: Ignore leading ? when sorting so that ambiguous terms sort alphabetically with other terms. This prevents terms from moving from their previous location when they become ambiguous.