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Revision 762

Added by Aaron Marcuse-Kubitza almost 13 years ago

inputs/NYBG: Map via DwC instead of VegX

View differences:

inputs/NYBG/maps/VegBIEN.organisms.csv
1 
NYBG:nybg_raw,VegBIEN:/taxonoccurrence,Comments
2 
BoundingBox,/*_id/locationevent/*_id/location/dsgpoly,
3 
CoordinatePrecision,/*_id/locationevent/*_id/location/locationaccuracy,
4 
Country,"/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL
5 
StateProvince,"/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=""region|state|province""])/placename",
6 
County,/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=county])/placename,
7 
Locality,/*_id/locationevent/*_id/location/locationplace/*_id/namedplace/placedescription,"Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one."
8 
Latitude,/*_id/locationevent/*_id/location/reallatitude,
9 
Longitude,/*_id/locationevent/*_id/location/reallongitude,
10 
MaximumElevation,"/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",
11 
MinimumElevation,"/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",
12 
CollectedDate,/*_id/locationevent/obsstartdate/_*/date,
13 
DayCollected,/*_id/locationevent/obsstartdate/_date/day,
14 
MonthCollected,/*_id/locationevent/obsstartdate/_date/month,
15 
YearCollected,/*_id/locationevent/obsstartdate/_date/year,
16 
MaximumDepth,/*_id/locationevent/waterdepth/max,
17 
MinimumDepth,/*_id/locationevent/waterdepth/min,
18 
Habitat,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=habitat]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
19 
PlantFungusDescription,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=plantFungusDescription]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Incorrect mapping to VB, also possibly to VX;  this is the specimenDescription field, as used by this institution (NOT a standard DwC element). Very important! Bob, Nick, where would this go in VB and VX?"
20 
Substrate,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=substrate]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Incorrect mapping to VB and VX; refers to geological substrate or soils where specimen collected. Often concatenated with habitat, or included with specimen description. Bob, Nick, is there an element for this in VB/VX, or shall we just use userDefined?"
21 
Vegetation,"/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=vegetation]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Habitat'. Bob, Nick: keep as user defined or create special element?"
22 
FieldNumber,/specimenreplicate:[*_id/reference]/catalognumber_dwc,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?"
23 
CollectorNumber,/specimenreplicate:[*_id/reference]/collectornumber_dwc,"Brad: OMIT; db-specific element, not relevant to VB/VX"
24 
Collector,/specimenreplicate:[*_id/reference]/verbatimcollectorname,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?
25 
InstitutionCode,/specimenreplicate:[*_id/reference]/{museum_id/party/organizationname/_name/first},
26 
CollectionCode,"/specimenreplicate:[*_id/reference]/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
27 
Sex,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]]:[@fkey=tableRecord_ID]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
28 
IdentifiedDate,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_*/date",
29 
DayIdentified,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_date/day",
30 
MonthIdentified,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_date/month",
31 
YearIdentified,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_date/year",
32 
IdentifiedBy,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?
33 
Notes,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,iscurrent=true]/notes","Brad: mapping OK; NY appears to be using this field for almost anything, but mostly internal collections notes"
34 
ScientificName,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname/_alt/1","Brad: Bob, Nick, please is this mapping OK?"
35 
ScientificNameAuthor,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author"
36 
Class,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Class]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",
37 
Family,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",
38 
Genus,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",
39 
Kingdom,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Kingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",
40 
Order,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Order]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",
41 
Species,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",
42 
Phylum,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",
43 
Subspecies,"/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/*_id/plantconcept/*_id/*/plantname",
44 
UniqueNYInternalRecordNumber,"/{aggregateoccurrence/*_id/plantobservation/authorplantcode,specimenreplicate:[*_id/reference]/sourceaccessioncode}","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key; Aaron: This is actually not populated in 8 rows, but a primary key is not necessary if duplicate elimination can be done on other columns for these rows"
45 
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.
46 
CatalogNumber,,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it"
47 
ContinentOcean,,Brad: OMIT
48 
DateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source."
49 
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.
50 
JulianDay,,Brad: OMIT
51 
PreparationType,,Brad: OMIT
52 
PreviousCatalogNumber,,Brad: OMIT
53 
RelatedCatalogItem,,Brad: OMIT
54 
RelationshipType,,Brad: OMIT
55 
TimeOfDay,,Brad: OMIT
56 
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN
57 
key,,Brad: OMIT; I'm pretty sure this is a temporary artificial ID generated at time of export.
inputs/NYBG/test/DwC.xml.ref
1 
<?xml version="1.0" ?>
2 
<DwC xmlns:dcterms="http://purl.org/dc/terms/">
3 
    <list id="0">
4 
        <dcterms:modified>2005-2-22T14:47:32.000EST</dcterms:modified>
5 
        <institutionCode>NY</institutionCode>
6 
        <collectionCode>Herbarium</collectionCode>
7 
        <catalogNumber>00682023</catalogNumber>
8 
        <scientificName>Cariniana estrellensis (Raddi) Kuntze</scientificName>
9 
        <basisOfRecord>S</basisOfRecord>
10 
        <kingdom>Plantae</kingdom>
11 
        <phylum>Magnoliophyta (flowering plants)</phylum>
12 
        <family>Lecythidaceae</family>
13 
        <genus>Cariniana</genus>
14 
        <specificEpithet>estrellensis</specificEpithet>
15 
        <scientificNameAuthorship>(Raddi) Kuntze</scientificNameAuthorship>
16 
        <fieldNumber>9877</fieldNumber>
17 
        <georeferencedBy>R. B. Foster</georeferencedBy>
18 
        <eventDate>1984-08-20</eventDate>
19 
        <day>233</day>
20 
        <continent>South America</continent>
21 
        <country>Peru</country>
22 
        <stateProvince>Madre de Dios</stateProvince>
23 
        <county>Man&#250;</county>
24 
        <verbatimLocality>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station</verbatimLocality>
25 
        <verbatimLongitude>-71.40000000</verbatimLongitude>
26 
        <verbatimLatitude>-11.80000000</verbatimLatitude>
27 
        <minimumElevationInMeters>350</minimumElevationInMeters>
28 
        <maximumElevationInMeters>350</maximumElevationInMeters>
29 
        <habitat>Floodplain forest</habitat>
30 
        <bien.plantFungusDescription>with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</bien.plantFungusDescription>
31 
        <occurrenceID>816590</occurrenceID>
32 
    </list>
33 
    <list id="1">
34 
        <dcterms:modified>2004-1-13T00:00EST</dcterms:modified>
35 
        <institutionCode>NY</institutionCode>
36 
        <collectionCode>Herbarium</collectionCode>
37 
        <catalogNumber>200996</catalogNumber>
38 
        <scientificName>Scrophulariaceae</scientificName>
39 
        <basisOfRecord>S</basisOfRecord>
40 
        <kingdom>Plantae</kingdom>
41 
        <phylum>Magnoliophyta (flowering plants)</phylum>
42 
        <family>Scrophulariaceae</family>
43 
        <fieldNumber>545</fieldNumber>
44 
        <georeferencedBy>J. B. Walker</georeferencedBy>
45 
        <eventDate>1994-01-17</eventDate>
46 
        <day>17</day>
47 
        <continent>Central America</continent>
48 
        <country>Belize</country>
49 
        <stateProvince>Belize District</stateProvince>
50 
        <verbatimLocality>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</verbatimLocality>
51 
        <verbatimLongitude>-88.50000000</verbatimLongitude>
52 
        <verbatimLatitude>17.40000000</verbatimLatitude>
53 
        <minimumElevationInMeters>15</minimumElevationInMeters>
54 
        <maximumElevationInMeters>15</maximumElevationInMeters>
55 
        <occurrenceID>220541</occurrenceID>
56 
    </list>
57 
</DwC>
inputs/NYBG/test/VegBIEN.xml.ref
1 1 
<?xml version="1.0" ?>
2 2 
<VegBIEN>
3 
    <taxonoccurrence id="0">
4 
        <locationevent_id>
5 
            <locationevent>
6 
                <location_id>
7 
                    <location>
8 
                        <locationplace>
9 
                            <namedplace_id>
10 
                                <namedplace>
11 
                                    <placesystem>area|country|territory</placesystem>
12 
                                    <placename>Peru</placename>
13 
                                </namedplace>
14 
                            </namedplace_id>
15 
                        </locationplace>
16 
                        <locationplace>
17 
                            <namedplace_id>
18 
                                <namedplace>
19 
                                    <placesystem>region|state|province</placesystem>
20 
                                    <placename>Madre de Dios</placename>
21 
                                </namedplace>
22 
                            </namedplace_id>
23 
                        </locationplace>
24 
                        <locationplace>
25 
                            <namedplace_id>
26 
                                <namedplace>
27 
                                    <placesystem>county</placesystem>
28 
                                    <placename>Man&#250;</placename>
29 
                                    <placedescription>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station</placedescription>
30 
                                </namedplace>
31 
                            </namedplace_id>
32 
                        </locationplace>
33 
                        <reallatitude>-11.80000000</reallatitude>
34 
                        <reallongitude>-71.40000000</reallongitude>
35 
                        <elevation>350.0</elevation>
36 
                        <elevationrange>0.0</elevationrange>
37 
                    </location>
38 
                </location_id>
39 
                <obsstartdate>1984-08-20</obsstartdate>
40 
            </locationevent>
41 
        </locationevent_id>
42 
        <aggregateoccurrence>
43 
            <plantobservation_id>
44 
                <plantobservation>
45 
                    <stemobservation>
46 
                        <definedvalue fkey="tableRecord_ID">
47 
                            <userdefined_id>
48 
                                <userdefined>
49 
                                    <tablename>stemobservation</tablename>
50 
                                    <userdefinedname>habitat</userdefinedname>
51 
                                </userdefined>
52 
                            </userdefined_id>
53 
                            <definedvalue>Floodplain forest</definedvalue>
54 
                        </definedvalue>
55 
                        <definedvalue fkey="tableRecord_ID">
56 
                            <userdefined_id>
57 
                                <userdefined>
58 
                                    <tablename>stemobservation</tablename>
59 
                                    <userdefinedname>plantFungusDescription</userdefinedname>
60 
                                </userdefined>
61 
                            </userdefined_id>
62 
                            <definedvalue>with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</definedvalue>
63 
                        </definedvalue>
64 
                    </stemobservation>
65 
                    <authorplantcode>816590</authorplantcode>
66 
                </plantobservation>
67 
            </plantobservation_id>
68 
        </aggregateoccurrence>
69 
        <specimenreplicate>
70 
            <reference_id>
71 
                <reference/>
72 
            </reference_id>
73 
            <catalognumber_dwc>9877</catalognumber_dwc>
74 
            <verbatimcollectorname>R. B. Foster</verbatimcollectorname>
75 
            <museum_id>
76 
                <party>
77 
                    <organizationname>NY Herbarium</organizationname>
78 
                </party>
79 
            </museum_id>
80 
            <collectioncode_dwc>Herbarium</collectioncode_dwc>
81 
            <sourceaccessioncode>816590</sourceaccessioncode>
82 
        </specimenreplicate>
83 
        <taxondetermination>
84 
            <role_id>
85 
                <role>
86 
                    <rolecode>identifier</rolecode>
87 
                </role>
88 
            </role_id>
89 
            <determinationtype>Author</determinationtype>
90 
            <isoriginal>true</isoriginal>
91 
            <iscurrent>true</iscurrent>
92 
            <plantconcept_id>
93 
                <plantconcept>
94 
                    <plantname_id>
95 
                        <plantname>
96 
                            <plantname>Cariniana estrellensis (Raddi) Kuntze</plantname>
97 
                        </plantname>
98 
                    </plantname_id>
99 
                </plantconcept>
100 
            </plantconcept_id>
101 
        </taxondetermination>
102 
        <taxondetermination>
103 
            <role_id>
104 
                <role>
105 
                    <rolecode>identifier</rolecode>
106 
                </role>
107 
            </role_id>
108 
            <plantconcept_id>
109 
                <plantconcept>
110 
                    <plantstatus>
111 
                        <plantlevel>Authority</plantlevel>
112 
                    </plantstatus>
113 
                    <plantname_id>
114 
                        <plantname>
115 
                            <plantname>(Raddi) Kuntze</plantname>
116 
                        </plantname>
117 
                    </plantname_id>
118 
                </plantconcept>
119 
            </plantconcept_id>
120 
            <determinationtype>Author</determinationtype>
121 
            <isoriginal>true</isoriginal>
122 
            <iscurrent>true</iscurrent>
123 
        </taxondetermination>
124 
        <taxondetermination>
125 
            <role_id>
126 
                <role>
127 
                    <rolecode>identifier</rolecode>
128 
                </role>
129 
            </role_id>
130 
            <plantconcept_id>
131 
                <plantconcept>
132 
                    <plantstatus>
133 
                        <plantlevel>Family</plantlevel>
134 
                    </plantstatus>
135 
                    <plantname_id>
136 
                        <plantname>
137 
                            <plantname>Lecythidaceae</plantname>
138 
                        </plantname>
139 
                    </plantname_id>
140 
                </plantconcept>
141 
            </plantconcept_id>
142 
            <determinationtype>Author</determinationtype>
143 
            <isoriginal>true</isoriginal>
144 
            <iscurrent>true</iscurrent>
145 
        </taxondetermination>
146 
        <taxondetermination>
147 
            <role_id>
148 
                <role>
149 
                    <rolecode>identifier</rolecode>
150 
                </role>
151 
            </role_id>
152 
            <plantconcept_id>
153 
                <plantconcept>
154 
                    <plantstatus>
155 
                        <plantlevel>Genus</plantlevel>
156 
                    </plantstatus>
157 
                    <plantname_id>
158 
                        <plantname>
159 
                            <plantname>Cariniana</plantname>
160 
                        </plantname>
161 
                    </plantname_id>
162 
                </plantconcept>
163 
            </plantconcept_id>
164 
            <determinationtype>Author</determinationtype>
165 
            <isoriginal>true</isoriginal>
166 
            <iscurrent>true</iscurrent>
167 
        </taxondetermination>
168 
        <taxondetermination>
169 
            <role_id>
170 
                <role>
171 
                    <rolecode>identifier</rolecode>
172 
                </role>
173 
            </role_id>
174 
            <plantconcept_id>
175 
                <plantconcept>
176 
                    <plantstatus>
177 
                        <plantlevel>Kingdom</plantlevel>
178 
                    </plantstatus>
179 
                    <plantname_id>
180 
                        <plantname>
181 
                            <plantname>Plantae</plantname>
182 
                        </plantname>
183 
                    </plantname_id>
184 
                </plantconcept>
185 
            </plantconcept_id>
186 
            <determinationtype>Author</determinationtype>
187 
            <isoriginal>true</isoriginal>
188 
            <iscurrent>true</iscurrent>
189 
        </taxondetermination>
190 
        <taxondetermination>
191 
            <role_id>
192 
                <role>
193 
                    <rolecode>identifier</rolecode>
194 
                </role>
195 
            </role_id>
196 
            <plantconcept_id>
197 
                <plantconcept>
198 
                    <plantstatus>
199 
                        <plantlevel>Species</plantlevel>
200 
                    </plantstatus>
201 
                    <plantname_id>
202 
                        <plantname>
203 
                            <plantname>estrellensis</plantname>
204 
                        </plantname>
205 
                    </plantname_id>
206 
                </plantconcept>
207 
            </plantconcept_id>
208 
            <determinationtype>Author</determinationtype>
209 
            <isoriginal>true</isoriginal>
210 
            <iscurrent>true</iscurrent>
211 
        </taxondetermination>
212 
        <taxondetermination>
213 
            <role_id>
214 
                <role>
215 
                    <rolecode>identifier</rolecode>
216 
                </role>
217 
            </role_id>
218 
            <plantconcept_id>
219 
                <plantconcept>
220 
                    <plantstatus>
221 
                        <plantlevel>Subkingdom</plantlevel>
222 
                    </plantstatus>
223 
                    <plantname_id>
224 
                        <plantname>
225 
                            <plantname>Magnoliophyta (flowering plants)</plantname>
226 
                        </plantname>
227 
                    </plantname_id>
228 
                </plantconcept>
229 
            </plantconcept_id>
230 
            <determinationtype>Author</determinationtype>
231 
            <isoriginal>true</isoriginal>
232 
            <iscurrent>true</iscurrent>
233 
        </taxondetermination>
234 
    </taxonoccurrence>
235 
    <taxonoccurrence id="1">
236 
        <locationevent_id>
237 
            <locationevent>
238 
                <location_id>
239 
                    <location>
240 
                        <locationplace>
241 
                            <namedplace_id>
242 
                                <namedplace>
243 
                                    <placesystem>area|country|territory</placesystem>
244 
                                    <placename>Belize</placename>
245 
                                </namedplace>
246 
                            </namedplace_id>
247 
                        </locationplace>
248 
                        <locationplace>
249 
                            <namedplace_id>
250 
                                <namedplace>
251 
                                    <placesystem>region|state|province</placesystem>
252 
                                    <placename>Belize District</placename>
253 
                                    <placedescription>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</placedescription>
254 
                                </namedplace>
255 
                            </namedplace_id>
256 
                        </locationplace>
257 
                        <reallatitude>17.40000000</reallatitude>
258 
                        <reallongitude>-88.50000000</reallongitude>
259 
                        <elevation>15.0</elevation>
260 
                        <elevationrange>0.0</elevationrange>
261 
                    </location>
262 
                </location_id>
263 
                <obsstartdate>1994-01-17</obsstartdate>
264 
            </locationevent>
265 
        </locationevent_id>
266 
        <specimenreplicate>
267 
            <reference_id>
268 
                <reference/>
269 
            </reference_id>
270 
            <catalognumber_dwc>545</catalognumber_dwc>
271 
            <verbatimcollectorname>J. B. Walker</verbatimcollectorname>
272 
            <museum_id>
273 
                <party>
274 
                    <organizationname>NY Herbarium</organizationname>
275 
                </party>
276 
            </museum_id>
277 
            <collectioncode_dwc>Herbarium</collectioncode_dwc>
278 
            <sourceaccessioncode>220541</sourceaccessioncode>
279 
        </specimenreplicate>
280 
        <taxondetermination>
281 
            <role_id>
282 
                <role>
283 
                    <rolecode>identifier</rolecode>
284 
                </role>
285 
            </role_id>
286 
            <determinationtype>Author</determinationtype>
287 
            <isoriginal>true</isoriginal>
288 
            <iscurrent>true</iscurrent>
289 
            <plantconcept_id>
290 
                <plantconcept>
291 
                    <plantname_id>
292 
                        <plantname>
293 
                            <plantname>Scrophulariaceae</plantname>
294 
                        </plantname>
295 
                    </plantname_id>
296 
                </plantconcept>
297 
            </plantconcept_id>
298 
        </taxondetermination>
299 
        <taxondetermination>
300 
            <role_id>
301 
                <role>
302 
                    <rolecode>identifier</rolecode>
303 
                </role>
304 
            </role_id>
305 
            <plantconcept_id>
306 
                <plantconcept>
307 
                    <plantstatus>
308 
                        <plantlevel>Family</plantlevel>
309 
                    </plantstatus>
310 
                    <plantname_id>
311 
                        <plantname>
312 
                            <plantname>Scrophulariaceae</plantname>
313 
                        </plantname>
314 
                    </plantname_id>
315 
                </plantconcept>
316 
            </plantconcept_id>
317 
            <determinationtype>Author</determinationtype>
318 
            <isoriginal>true</isoriginal>
319 
            <iscurrent>true</iscurrent>
320 
        </taxondetermination>
321 
        <taxondetermination>
322 
            <role_id>
323 
                <role>
324 
                    <rolecode>identifier</rolecode>
325 
                </role>
326 
            </role_id>
327 
            <plantconcept_id>
328 
                <plantconcept>
329 
                    <plantstatus>
330 
                        <plantlevel>Kingdom</plantlevel>
331 
                    </plantstatus>
332 
                    <plantname_id>
333 
                        <plantname>
334 
                            <plantname>Plantae</plantname>
335 
                        </plantname>
336 
                    </plantname_id>
337 
                </plantconcept>
338 
            </plantconcept_id>
339 
            <determinationtype>Author</determinationtype>
340 
            <isoriginal>true</isoriginal>
341 
            <iscurrent>true</iscurrent>
342 
        </taxondetermination>
343 
        <taxondetermination>
344 
            <role_id>
345 
                <role>
346 
                    <rolecode>identifier</rolecode>
347 
                </role>
348 
            </role_id>
349 
            <plantconcept_id>
350 
                <plantconcept>
351 
                    <plantstatus>
352 
                        <plantlevel>Subkingdom</plantlevel>
353 
                    </plantstatus>
354 
                    <plantname_id>
355 
                        <plantname>
356 
                            <plantname>Magnoliophyta (flowering plants)</plantname>
357 
                        </plantname>
358 
                    </plantname_id>
359 
                </plantconcept>
360 
            </plantconcept_id>
361 
            <determinationtype>Author</determinationtype>
362 
            <isoriginal>true</isoriginal>
363 
            <iscurrent>true</iscurrent>
364 
        </taxondetermination>
365 
        <aggregateoccurrence>
366 
            <plantobservation_id>
367 
                <plantobservation>
368 
                    <authorplantcode>220541</authorplantcode>
369 
                </plantobservation>
370 
            </plantobservation_id>
371 
        </aggregateoccurrence>
372 
    </taxonoccurrence>
3 
    <specimenreplicate id="0">
4 
        <taxonoccurrence_id>
5 
            <taxonoccurrence>
6 
                <locationevent_id>
7 
                    <locationevent>
8 
                        <location_id>
9 
                            <location>
10 
                                <locationplace>
11 
                                    <namedplace_id>
12 
                                        <namedplace>
13 
                                            <placesystem>area|country|territory</placesystem>
14 
                                            <placename>Peru</placename>
15 
                                        </namedplace>
16 
                                    </namedplace_id>
17 
                                </locationplace>
18 
                                <locationplace>
19 
                                    <namedplace_id>
20 
                                        <namedplace>
21 
                                            <placesystem>region|state|province</placesystem>
22 
                                            <placename>Madre de Dios</placename>
23 
                                        </namedplace>
24 
                                    </namedplace_id>
25 
                                </locationplace>
26 
                                <locationplace>
27 
                                    <namedplace_id>
28 
                                        <namedplace>
29 
                                            <placesystem>county</placesystem>
30 
                                            <placename>Man&#250;</placename>
31 
                                            <placedescription>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station</placedescription>
32 
                                        </namedplace>
33 
                                    </namedplace_id>
34 
                                </locationplace>
35 
                                <reallatitude>-11.80000000</reallatitude>
36 
                                <reallongitude>-71.40000000</reallongitude>
37 
                                <elevation>350.0</elevation>
38 
                                <elevationrange>0.0</elevationrange>
39 
                            </location>
40 
                        </location_id>
41 
                        <obsstartdate>1984-08-20</obsstartdate>
42 
                    </locationevent>
43 
                </locationevent_id>
44 
                <aggregateoccurrence>
45 
                    <plantobservation_id>
46 
                        <plantobservation>
47 
                            <stemobservation>
48 
                                <definedvalue fkey="tableRecord_ID">
49 
                                    <userdefined_id>
50 
                                        <userdefined>
51 
                                            <tablename>stemobservation</tablename>
52 
                                            <userdefinedname>habitat</userdefinedname>
53 
                                        </userdefined>
54 
                                    </userdefined_id>
55 
                                    <definedvalue>Floodplain forest</definedvalue>
56 
                                </definedvalue>
57 
                                <definedvalue fkey="tableRecord_ID">
58 
                                    <userdefined_id>
59 
                                        <userdefined>
60 
                                            <tablename>stemobservation</tablename>
61 
                                            <userdefinedname>plantFungusDescription</userdefinedname>
62 
                                        </userdefined>
63 
                                    </userdefined_id>
64 
                                    <definedvalue>with rough brown bark, almost no buttressing, 1 m diam; fallen fruit and leaves</definedvalue>
65 
                                </definedvalue>
66 
                            </stemobservation>
67 
                            <authorplantcode>816590</authorplantcode>
68 
                        </plantobservation>
69 
                    </plantobservation_id>
70 
                </aggregateoccurrence>
71 
                <taxondetermination>
72 
                    <role_id>
73 
                        <role>
74 
                            <rolecode>identifier</rolecode>
75 
                        </role>
76 
                    </role_id>
77 
                    <determinationtype>Author</determinationtype>
78 
                    <isoriginal>true</isoriginal>
79 
                    <iscurrent>true</iscurrent>
80 
                    <plantconcept_id>
81 
                        <plantconcept>
82 
                            <plantname_id>
83 
                                <plantname>
84 
                                    <plantname>Cariniana estrellensis (Raddi) Kuntze</plantname>
85 
                                </plantname>
86 
                            </plantname_id>
87 
                        </plantconcept>
88 
                    </plantconcept_id>
89 
                </taxondetermination>
90 
                <taxondetermination>
91 
                    <role_id>
92 
                        <role>
93 
                            <rolecode>identifier</rolecode>
94 
                        </role>
95 
                    </role_id>
96 
                    <plantconcept_id>
97 
                        <plantconcept>
98 
                            <plantstatus>
99 
                                <plantlevel>Authority</plantlevel>
100 
                            </plantstatus>
101 
                            <plantname_id>
102 
                                <plantname>
103 
                                    <plantname>(Raddi) Kuntze</plantname>
104 
                                </plantname>
105 
                            </plantname_id>
106 
                        </plantconcept>
107 
                    </plantconcept_id>
108 
                    <determinationtype>Author</determinationtype>
109 
                    <isoriginal>true</isoriginal>
110 
                    <iscurrent>true</iscurrent>
111 
                </taxondetermination>
112 
                <taxondetermination>
113 
                    <role_id>
114 
                        <role>
115 
                            <rolecode>identifier</rolecode>
116 
                        </role>
117 
                    </role_id>
118 
                    <plantconcept_id>
119 
                        <plantconcept>
120 
                            <plantstatus>
121 
                                <plantlevel>Family</plantlevel>
122 
                            </plantstatus>
123 
                            <plantname_id>
124 
                                <plantname>
125 
                                    <plantname>Lecythidaceae</plantname>
126 
                                </plantname>
127 
                            </plantname_id>
128 
                        </plantconcept>
129 
                    </plantconcept_id>
130 
                    <determinationtype>Author</determinationtype>
131 
                    <isoriginal>true</isoriginal>
132 
                    <iscurrent>true</iscurrent>
133 
                </taxondetermination>
134 
                <taxondetermination>
135 
                    <role_id>
136 
                        <role>
137 
                            <rolecode>identifier</rolecode>
138 
                        </role>
139 
                    </role_id>
140 
                    <plantconcept_id>
141 
                        <plantconcept>
142 
                            <plantstatus>
143 
                                <plantlevel>Genus</plantlevel>
144 
                            </plantstatus>
145 
                            <plantname_id>
146 
                                <plantname>
147 
                                    <plantname>Cariniana</plantname>
148 
                                </plantname>
149 
                            </plantname_id>
150 
                        </plantconcept>
151 
                    </plantconcept_id>
152 
                    <determinationtype>Author</determinationtype>
153 
                    <isoriginal>true</isoriginal>
154 
                    <iscurrent>true</iscurrent>
155 
                </taxondetermination>
156 
                <taxondetermination>
157 
                    <role_id>
158 
                        <role>
159 
                            <rolecode>identifier</rolecode>
160 
                        </role>
161 
                    </role_id>
162 
                    <plantconcept_id>
163 
                        <plantconcept>
164 
                            <plantstatus>
165 
                                <plantlevel>Kingdom</plantlevel>
166 
                            </plantstatus>
167 
                            <plantname_id>
168 
                                <plantname>
169 
                                    <plantname>Plantae</plantname>
170 
                                </plantname>
171 
                            </plantname_id>
172 
                        </plantconcept>
173 
                    </plantconcept_id>
174 
                    <determinationtype>Author</determinationtype>
175 
                    <isoriginal>true</isoriginal>
176 
                    <iscurrent>true</iscurrent>
177 
                </taxondetermination>
178 
                <taxondetermination>
179 
                    <role_id>
180 
                        <role>
181 
                            <rolecode>identifier</rolecode>
182 
                        </role>
183 
                    </role_id>
184 
                    <plantconcept_id>
185 
                        <plantconcept>
186 
                            <plantstatus>
187 
                                <plantlevel>Species</plantlevel>
188 
                            </plantstatus>
189 
                            <plantname_id>
190 
                                <plantname>
191 
                                    <plantname>estrellensis</plantname>
192 
                                </plantname>
193 
                            </plantname_id>
194 
                        </plantconcept>
195 
                    </plantconcept_id>
196 
                    <determinationtype>Author</determinationtype>
197 
                    <isoriginal>true</isoriginal>
198 
                    <iscurrent>true</iscurrent>
199 
                </taxondetermination>
200 
                <taxondetermination>
201 
                    <role_id>
202 
                        <role>
203 
                            <rolecode>identifier</rolecode>
204 
                        </role>
205 
                    </role_id>
206 
                    <plantconcept_id>
207 
                        <plantconcept>
208 
                            <plantstatus>
209 
                                <plantlevel>Subkingdom</plantlevel>
210 
                            </plantstatus>
211 
                            <plantname_id>
212 
                                <plantname>
213 
                                    <plantname>Magnoliophyta (flowering plants)</plantname>
214 
                                </plantname>
215 
                            </plantname_id>
216 
                        </plantconcept>
217 
                    </plantconcept_id>
218 
                    <determinationtype>Author</determinationtype>
219 
                    <isoriginal>true</isoriginal>
220 
                    <iscurrent>true</iscurrent>
221 
                </taxondetermination>
222 
            </taxonoccurrence>
223 
        </taxonoccurrence_id>
224 
        <reference_id>
225 
            <reference/>
226 
        </reference_id>
227 
        <sourceaccessioncode>816590</sourceaccessioncode>
228 
        <catalognumber_dwc>9877</catalognumber_dwc>
229 
        <verbatimcollectorname>R. B. Foster</verbatimcollectorname>
230 
        <museum_id>
231 
            <party>
232 
                <organizationname>NY Herbarium</organizationname>
233 
            </party>
234 
        </museum_id>
235 
        <collectioncode_dwc>Herbarium</collectioncode_dwc>
236 
    </specimenreplicate>
237 
    <specimenreplicate id="1">
238 
        <taxonoccurrence_id>
239 
            <taxonoccurrence>
240 
                <locationevent_id>
241 
                    <locationevent>
242 
                        <location_id>
243 
                            <location>
244 
                                <locationplace>
245 
                                    <namedplace_id>
246 
                                        <namedplace>
247 
                                            <placesystem>area|country|territory</placesystem>
248 
                                            <placename>Belize</placename>
249 
                                        </namedplace>
250 
                                    </namedplace_id>
251 
                                </locationplace>
252 
                                <locationplace>
253 
                                    <namedplace_id>
254 
                                        <namedplace>
255 
                                            <placesystem>region|state|province</placesystem>
256 
                                            <placename>Belize District</placename>
257 
                                            <placedescription>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</placedescription>
258 
                                        </namedplace>
259 
                                    </namedplace_id>
260 
                                </locationplace>
261 
                                <reallatitude>17.40000000</reallatitude>
262 
                                <reallongitude>-88.50000000</reallongitude>
263 
                                <elevation>15.0</elevation>
264 
                                <elevationrange>0.0</elevationrange>
265 
                            </location>
266 
                        </location_id>
267 
                        <obsstartdate>1994-01-17</obsstartdate>
268 
                    </locationevent>
269 
                </locationevent_id>
270 
                <taxondetermination>
271 
                    <role_id>
272 
                        <role>
273 
                            <rolecode>identifier</rolecode>
274 
                        </role>
275 
                    </role_id>
276 
                    <determinationtype>Author</determinationtype>
277 
                    <isoriginal>true</isoriginal>
278 
                    <iscurrent>true</iscurrent>
279 
                    <plantconcept_id>
280 
                        <plantconcept>
281 
                            <plantname_id>
282 
                                <plantname>
283 
                                    <plantname>Scrophulariaceae</plantname>
284 
                                </plantname>
285 
                            </plantname_id>
286 
                        </plantconcept>
287 
                    </plantconcept_id>
288 
                </taxondetermination>
289 
                <taxondetermination>
290 
                    <role_id>
291 
                        <role>
292 
                            <rolecode>identifier</rolecode>
293 
                        </role>
294 
                    </role_id>
295 
                    <plantconcept_id>
296 
                        <plantconcept>
297 
                            <plantstatus>
298 
                                <plantlevel>Family</plantlevel>
299 
                            </plantstatus>
300 
                            <plantname_id>
301 
                                <plantname>
302 
                                    <plantname>Scrophulariaceae</plantname>
303 
                                </plantname>
304 
                            </plantname_id>
305 
                        </plantconcept>
306 
                    </plantconcept_id>
307 
                    <determinationtype>Author</determinationtype>
308 
                    <isoriginal>true</isoriginal>
309 
                    <iscurrent>true</iscurrent>
310 
                </taxondetermination>
311 
                <taxondetermination>
312 
                    <role_id>
313 
                        <role>
314 
                            <rolecode>identifier</rolecode>
315 
                        </role>
316 
                    </role_id>
317 
                    <plantconcept_id>
318 
                        <plantconcept>
319 
                            <plantstatus>
320 
                                <plantlevel>Kingdom</plantlevel>
321 
                            </plantstatus>
322 
                            <plantname_id>
323 
                                <plantname>
324 
                                    <plantname>Plantae</plantname>
325 
                                </plantname>
326 
                            </plantname_id>
327 
                        </plantconcept>
328 
                    </plantconcept_id>
329 
                    <determinationtype>Author</determinationtype>
330 
                    <isoriginal>true</isoriginal>
331 
                    <iscurrent>true</iscurrent>
332 
                </taxondetermination>
333 
                <taxondetermination>
334 
                    <role_id>
335 
                        <role>
336 
                            <rolecode>identifier</rolecode>
337 
                        </role>
338 
                    </role_id>
339 
                    <plantconcept_id>
340 
                        <plantconcept>
341 
                            <plantstatus>
342 
                                <plantlevel>Subkingdom</plantlevel>
343 
                            </plantstatus>
344 
                            <plantname_id>
345 
                                <plantname>
346 
                                    <plantname>Magnoliophyta (flowering plants)</plantname>
347 
                                </plantname>
348 
                            </plantname_id>
349 
                        </plantconcept>
350 
                    </plantconcept_id>
351 
                    <determinationtype>Author</determinationtype>
352 
                    <isoriginal>true</isoriginal>
353 
                    <iscurrent>true</iscurrent>
354 
                </taxondetermination>
355 
                <aggregateoccurrence>
356 
                    <plantobservation_id>
357 
                        <plantobservation>
358 
                            <authorplantcode>220541</authorplantcode>
359 
                        </plantobservation>
360 
                    </plantobservation_id>
361 
                </aggregateoccurrence>
362 
            </taxonoccurrence>
363 
        </taxonoccurrence_id>
364 
        <reference_id>
365 
            <reference/>
366 
        </reference_id>
367 
        <sourceaccessioncode>220541</sourceaccessioncode>
368 
        <catalognumber_dwc>545</catalognumber_dwc>
369 
        <verbatimcollectorname>J. B. Walker</verbatimcollectorname>
370 
        <museum_id>
371 
            <party>
372 
                <organizationname>NY Herbarium</organizationname>
373 
            </party>
374 
        </museum_id>
375 
        <collectioncode_dwc>Herbarium</collectioncode_dwc>
376 
    </specimenreplicate>
373 377 
</VegBIEN>
inputs/NYBG/maps/DwC.specimens.csv
1 
"NYBG:nybg_raw","DwC::[@xmlns:dcterms=""http://purl.org/dc/terms/""]/list/","Comments"
2 
"key",,
3 
"DateLastModified","dcterms:modified",
4 
"InstitutionCode","institutionCode",
5 
"CollectionCode","collectionCode",
6 
"CatalogNumber","catalogNumber",
7 
"ScientificName","scientificName",
8 
"BasisOfRecord","basisOfRecord",
9 
"Kingdom","kingdom",
10 
"Phylum","phylum",
11 
"Class","class",
12 
"Order","order",
13 
"Family","family",
14 
"Genus","genus",
15 
"Species","specificEpithet",
16 
"Subspecies",,
17 
"ScientificNameAuthor","scientificNameAuthorship",
18 
"IdentifiedBy","identifiedBy",
19 
"YearIdentified","dateIdentified/_alt/2/_date/year",
20 
"MonthIdentified","dateIdentified/_alt/2/_date/month",
21 
"DayIdentified","dateIdentified/_alt/2/_date/day",
22 
"IdentifiedDate","dateIdentified/_alt/1",
23 
"TypeStatus","typeStatus",
24 
"CollectorNumber","individualID","?"
25 
"FieldNumber","fieldNumber",
26 
"Collector","georeferencedBy","?"
27 
"YearCollected","eventDate/_alt/2/_date/year",
28 
"MonthCollected","eventDate/_alt/2/_date/month",
29 
"DayCollected","eventDate/_alt/2/_date/day",
30 
"CollectedDate","eventDate/_alt/1",
31 
"JulianDay","day",
32 
"TimeOfDay","eventTime",
33 
"ContinentOcean","continent",
34 
"Country","country",
35 
"StateProvince","stateProvince",
36 
"County","county",
37 
"Locality","verbatimLocality","or locality?"
38 
"Longitude","verbatimLongitude","or decimalLongitude?"
39 
"Latitude","verbatimLatitude","or decimalLatitude?"
40 
"CoordinatePrecision","coordinatePrecision",
41 
"BoundingBox",,
42 
"MinimumElevation","minimumElevationInMeters",
43 
"MaximumElevation","maximumElevationInMeters",
44 
"MinimumDepth","minimumDepthInMeters",
45 
"MaximumDepth","maximumDepthInMeters",
46 
"Sex","sex",
47 
"PreparationType","preparations",
48 
"IndividualCount","individualCount",
49 
"PreviousCatalogNumber","previousIdentifications","?"
50 
"RelationshipType","relationshipOfResource",
51 
"RelatedCatalogItem","relatedResourceID",
52 
"Notes","fieldNotes",
53 
"Habitat","habitat",
54 
"PlantFungusDescription","bien.plantFungusDescription",
55 
"Substrate",,
56 
"Vegetation",,
57 
"UniqueNYInternalRecordNumber","occurrenceID",
inputs/NYBG/maps/VegBIEN.specimens.csv
1 
NYBG:nybg_raw,VegBIEN:/specimenreplicate,Comments,Order
2 
CoordinatePrecision,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationaccuracy,,89
3 
Country,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=""area|country|territory""])/placename",Brad: Required; reject record if this field NULL,63
4 
StateProvince,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=""region|state|province""])/placename",,65
5 
County,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationplace(/*_id/namedplace[placesystem=county])/placename,,66
6 
Locality,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/locationplace/*_id/namedplace/placedescription,"or locality?; Brad: Correct for VB; Nick, is there no specific element for locality description in VegX? Definitely need one.",69
7 
Latitude,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/reallatitude,or decimalLatitude?,81
8 
Longitude,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/reallongitude,or decimalLongitude?,82
9 
MaximumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
10 
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
11 
CollectedDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/1,,44
12 
DayCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/2/_date/day,,44
13 
MonthCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/2/_date/month,,44
14 
YearCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_*/date/_alt/2/_date/year,,44
15 
MaximumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/max,,75
16 
MinimumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/min,,74
17 
Habitat,"/*_id/taxonoccurrence/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=habitat]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
18 
PlantFungusDescription,"/*_id/taxonoccurrence/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=plantFungusDescription]]:[@fkey=tableRecord_ID]/definedvalue",,
19 
Sex,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]]:[@fkey=tableRecord_ID]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections",26
20 
IdentifiedDate,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_*/date/_alt/1",,120
21 
DayIdentified,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_*/date/_alt/2/_date/day",,120
22 
MonthIdentified,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_*/date/_alt/2/_date/month",,120
23 
YearIdentified,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_*/date/_alt/2/_date/year",,120
24 
IdentifiedBy,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,iscurrent=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?,119
25 
Notes,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,iscurrent=true]/notes","Brad: mapping OK; NY appears to be using this field for almost anything, but mostly internal collections notes",54
26 
ScientificName,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname/_alt/1","Brad: Bob, Nick, please is this mapping OK?",134
27 
ScientificNameAuthor,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author",153
28 
Class,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Class]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,144
29 
Family,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,146
30 
Genus,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,147
31 
Kingdom,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Kingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,142
32 
Order,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Order]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,145
33 
Species,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,149
34 
Phylum,"/*_id/taxonoccurrence/taxondetermination[*_id/role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,isoriginal=true,iscurrent=true]/*_id/plantconcept/*_id/*/plantname",,143
35 
UniqueNYInternalRecordNumber,"/{:[*_id/reference]/sourceaccessioncode,*_id/taxonoccurrence/aggregateoccurrence/*_id/plantobservation/authorplantcode}","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key",19
36 
FieldNumber,:[*_id/reference]/catalognumber_dwc,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?",53
37 
CollectorNumber,:[*_id/reference]/collectornumber_dwc,"?; Brad: OMIT; db-specific element, not relevant to VB/VX",24
38 
Collector,:[*_id/reference]/verbatimcollectorname,?; Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen?,94
39 
InstitutionCode,:[*_id/reference]/{museum_id/party/organizationname/_name/first},,11
40 
CollectionCode,":[*_id/reference]/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name,12
41 
BasisOfRecord,,Brad: OMIT? See http://rs.tdwg.org/dwc/terms/index.htm#basisOfRecord for definition of this term.,15
42 
BoundingBox,,
43 
CatalogNumber,,"Brad: Not sure if mapping correct. Nick, is there an element for institutional accession codes in VegX?; Aaron: This can't be used as the accession code (primary key) because some rows don't have a value for it",20
44 
ContinentOcean,,Brad: OMIT,59
45 
DateLastModified,,"Brad: Mapping to VegX is incorrect. I think is this merely an internal timestamp indicated when record last modified, not necessarily when determination (taxon name) last modified. Probably we should omit this field, although might be useful for updating changed records from this source.",1
46 
IndividualCount,,Brad: OMIT; not relevant for DwC plant specimen data.,25
47 
JulianDay,,Brad: OMIT,50
48 
PreparationType,,Brad: OMIT,32
49 
PreviousCatalogNumber,,?; Brad: OMIT,35
50 
RelatedCatalogItem,,Brad: OMIT,161
51 
RelationshipType,,Brad: OMIT,162
52 
Subspecies,,
53 
Substrate,,
54 
TimeOfDay,,Brad: OMIT,45
55 
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
56 
Vegetation,,
57 
key,,

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