Project

General

Profile

1
ARIZ,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
2
catalogNumber,"/_if[@name=""if specimen""]/cond/_exists",
3
occid,"/_if[@name=""if specimen""]/cond/_exists/_first/1",
4
occurrenceID,"/_if[@name=""if specimen""]/cond/_exists/_first/2",Not populated for all rows
5
occid,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/1/_first/1",
6
occurrenceID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/1/_first/2",Not populated for all rows
7
catalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists",
8
catalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
9
occid,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists/_first/1",
10
occurrenceID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists/_first/2",Not populated for all rows
11
catalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_if[@name=""if plot""]/else/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/else",
12
verbatimElevation,"/location/elevation_m/_alt/1/_units:[to=m,to=]/value",
13
maximumElevationInMeters,/location/elevation_m/_alt/2/_avg/max,
14
minimumElevationInMeters,/location/elevation_m/_alt/2/_avg/min,
15
recordNumber,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
16
occid,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists/_first/1",
17
occurrenceID,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/cond/_exists/_first/2",Not populated for all rows
18
cultivationStatus,"/location/iscultivated/_or/1/_if[@name=""if TaxonOccurrence""]/else/_alt/2",
19
locality,/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/1,
20
habitat,/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/3,
21
samplingProtocol,/location/locationevent/*_id/method/name,
22
eventDate,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/cond/_exists",
23
eventDate,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/obsenddate/_alt/2/_dateRangeEnd/value",
24
eventDate,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/obsstartdate/_alt/2/_dateRangeStart/value",
25
eventDate,/location/locationevent/obsenddate/_alt/2/_dateRangeEnd/value,
26
eventDate,/location/locationevent/obsstartdate/_alt/2/_dateRangeStart/value,
27
dateIdentified,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/determinationdate/_alt/1/_dateRangeStart/value",
28
taxonRemarks,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/notes",
29
identificationQualifier,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/taxonfit",
30
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
31
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_first/2,
32
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
33
reproductiveCondition,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/reproductivecondition,
34
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
35
recordNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/else",
36
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists",
37
occid,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists/_first/1",
38
occurrenceID,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcelist/_if[@name=""if specimen""]/cond/_exists/_first/2",Not populated for all rows
39
occid,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode/_first/1,
40
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode/_first/2,Not populated for all rows
41
recordNumber,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/3",
42
scientificName,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/3/_first/2",
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recordedBy,/location/locationevent/taxonoccurrence/collector_id/party/fullname,
44
recordNumber,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
45
occid,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists/_first/1",
46
occurrenceID,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists/_first/2",Not populated for all rows
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cultivationStatus,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/then/_alt/2",
48
occid,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3/_first/1,
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occurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3/_first/2,Not populated for all rows
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname,
51
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/rank",
52
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
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genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
54
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
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infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/taxonepithet,
56
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/rank,
57
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonepithet/_if[@name=""if taxonomic name is epithet""]/cond/_alt:[2=true]/1/_taxonomic_name_is_epithet/rank",
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family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/prefix/_taxon_family_require_std/family,
59
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/1,
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genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/2,
61
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1,
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infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
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taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
64
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2,
65
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_merge_prefix/value/_alt/2/_join_words/2,
66
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/author,
67
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family,
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genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus,
69
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet,
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scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/taxonomicname,
71
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/verbatimrank,
72
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_dateRangeStart/value,
73
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes,
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identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
75
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
76
recordNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/collectionnumber/_if[@name=""if indirect voucher""]/then",
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locality,/location/locationnarrative/_merge/1,
78
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
79
coordinateUncertaintyInMeters,/location/locationplace/*_id/place/*_id/coordinates/coordsaccuracy_m/_noCV/value,
80
footprintWKT,/location/locationplace/*_id/place/*_id/coordinates/footprintgeometry_dwc,
81
decimalLatitude,"/location/locationplace/*_id/place/*_id/coordinates/latitude_deg/_nullIf:[null=0,type=float]/value",
82
decimalLongitude,"/location/locationplace/*_id/place/*_id/coordinates/longitude_deg/_nullIf:[null=0,type=float]/value",
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verbatimCoordinates,/location/locationplace/*_id/place/*_id/coordinates/verbatimcoordinates,
84
country,/location/locationplace/*_id/place/country,
85
county,/location/locationplace/*_id/place/county,
86
decimalLatitude,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/latitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
87
decimalLongitude,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/longitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
88
country,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/country/_first/2,
89
county,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/county/_first/2,
90
stateProvince,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2,
91
stateProvince,/location/locationplace/*_id/place/stateprovince,
92
locationRemarks,/location/notespublic,
93
verbatimElevation,/location/verbatimelevation,
94
associatedCollectors,,** No join mapping for *associatedCollectors ** 
95
associatedOccurrences,,** No join mapping for associatedOccurrences ** 
96
associatedTaxa,,** No join mapping for associatedTaxa ** 
97
attributes,,** No join mapping for *attributes ** 
98
basisOfRecord,,** No join mapping for basisOfRecord ** 
99
collectionCode,,** No non-empty join mapping for UNUSED ** 
100
collectionID,,** No non-empty join mapping for UNUSED ** 
101
collid,,** No join mapping for *collid ** 
102
coordinatePrecision,,** No join mapping for *coordinatePrecision ** 
103
dataGeneralizations,,** No join mapping for dataGeneralizations ** 
104
datasetID,,** No non-empty join mapping for UNUSED ** 
105
dateLastModified,,** No join mapping for modified ** 
106
day,,** No join mapping for day ** 
107
dbpk,,** No join mapping for *dbpk ** Only populated for 2651 rows
108
deaccessioned,,** No join mapping for *deaccessioned ** 
109
disposition,,** No join mapping for disposition ** 
110
duplicateQuantity,,** No join mapping for *duplicateQuantity ** 
111
duplicateid,,** No join mapping for *duplicateid ** 
112
dynamicProperties,,** No join mapping for dynamicProperties ** 
113
endDayOfYear,,** No join mapping for endDayOfYear ** 
114
establishmentMeans,,"** No non-empty join mapping for OMIT ** Only populated for 1 row, which also has cultivationStatus"
115
fieldNotes,,** No non-empty join mapping for UNUSED ** 
116
fieldnumber,,** No non-empty join mapping for UNUSED ** 
117
genericcolumn1,,** No join mapping for *genericcolumn1 ** 
118
genericcolumn2,,** No join mapping for *genericcolumn2 ** 
119
geodeticDatum,,** No join mapping for geodeticDatum ** 
120
georeferenceProtocol,,** No join mapping for georeferenceProtocol ** 
121
georeferenceRemarks,,** No join mapping for georeferenceRemarks ** 
122
georeferenceSources,,** No join mapping for georeferenceSources ** 
123
georeferenceVerificationStatus,,** No join mapping for georeferenceVerificationStatus ** 
124
georeferencedBy,,** No join mapping for georeferencedBy ** 
125
identificationReferences,,** No join mapping for identificationReferences ** 
126
identificationRemarks,,** No join mapping for identificationRemarks ** 
127
informationWithheld,,** No join mapping for informationWithheld ** 
128
institutionCode,,** No non-empty join mapping for UNUSED ** 
129
institutionID,,** No non-empty join mapping for UNUSED ** 
130
labelProject,,** No join mapping for *labelProject ** 
131
language,,** No join mapping for language ** 
132
lifeStage,,** No join mapping for lifeStage ** 
133
localitySecurity,,** No join mapping for *localitySecurity ** 
134
localitySecurityReason,,** No join mapping for *localitySecurityReason ** 
135
modified,,** No join mapping for modified ** 
136
month,,** No join mapping for month ** 
137
municipality,,** No join mapping for municipality ** 
138
observeruid,,** No join mapping for *observeruid ** 
139
occurrenceRemarks,,** No join mapping for occurrenceRemarks ** 
140
otherCatalogNumbers,,** No join mapping for otherCatalogNumbers ** 
141
ownerInstitutionCode,,** No join mapping for specimenOwner ** Only populated for 547 rows
142
preparations,,** No join mapping for preparations ** 
143
previousIdentifications,,** No join mapping for previousIdentifications ** 
144
processingstatus,,** No join mapping for *processingstatus ** 
145
recordEnteredBy,,** No join mapping for *recordEnteredBy ** 
146
recordedById,,** No join mapping for *recordedById ** 
147
sciname,,** No join mapping for *sciname ** 
148
startDayOfYear,,** No join mapping for startDayOfYear ** 
149
substrate,,** No join mapping for *substrate ** 
150
tidinterpreted,,** No join mapping for *tidinterpreted ** 
151
typeStatus,,** No join mapping for typeStatus ** 
152
verbatimAttributes,,** No join mapping for *verbatimAttributes ** 
153
verbatimCoordinateSystem,,** No join mapping for verbatimCoordinateSystem ** 
154
verbatimEventDate,,** No join mapping for verbatimEventDate ** 
155
year,,** No join mapping for year ** 
(2-2/7)