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Revision 7717

Added by Aaron Marcuse-Kubitza over 11 years ago

inputs/SpeciesLink/Specimen/map.csv: dwc_dwcore_Remarks: Remapped to occurrenceRemarks (it had been incorrectly automapped to taxonRemarks). Combined occurrenceRemarks inputs using /_alt.

View differences:

inputs/SpeciesLink/Specimen/map.csv
5 5 
dwc_dwcore_InstitutionCode,specimenHolders,,
6 6 
dwc_dwcore_CollectionCode,collection,,
7 7 
dwc_dwcore_CatalogNumber,accessionNumber,,
8 
dwc_dwcore_Remarks,taxonRemarks,,
8 
dwc_dwcore_Remarks,occurrenceRemarks,/_alt/3,
9 9 
dwc_dwcore_ScientificName,taxonName,,
10 10 
dwc_dwcore_Kingdom,kingdom,,
11 11 
dwc_dwcore_Phylum,phylum,,
......
50 50 
dwc_terms_dateIdentified,dateIdentified,,
51 51 
dwc_terms_typeStatus,typeStatus,,
52 52 
dwc_terms_catalogNumber,accessionNumber,,
53 
dwc_terms_occurrenceRemarks,occurrenceRemarks,,
53 
dwc_terms_occurrenceRemarks,occurrenceRemarks,/_alt/1,
54 54 
dwc_terms_recordNumber,collectorNumber,/_alt/1,
55 55 
dwc_terms_recordedBy,recordedBy,,
56 56 
dwc_terms_individualCount,individualCount,,
......
143 143 
conceptual_darwin_2003_1_0_PreviousCatalogNumber,otherCatalogNumbers,,
144 144 
conceptual_darwin_2003_1_0_RelationshipType,relationshipOfResource,,
145 145 
conceptual_darwin_2003_1_0_RelatedCatalogItem,relatedResourceID,,
146 
conceptual_darwin_2003_1_0_Notes,occurrenceRemarks,,
146 
conceptual_darwin_2003_1_0_Notes,occurrenceRemarks,/_alt/2,
inputs/SpeciesLink/Specimen/VegBIEN.csv
56 56 
conceptual_darwin_2003_1_0_DayIdentified,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
57 57 
conceptual_darwin_2003_1_0_MonthIdentified,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
58 58 
conceptual_darwin_2003_1_0_YearIdentified,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
59 
dwc_dwcore_Remarks,"/location/locationevent/taxonoccurrence/_if[@name=""if has accepted name""]/then/taxondetermination:[determinationtype=accepted]/notes",
60 59 
conceptual_darwin_2003_1_0_DayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
61 60 
conceptual_darwin_2003_1_0_MonthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
62 61 
conceptual_darwin_2003_1_0_YearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
63 62 
conceptual_darwin_2003_1_0_IndividualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
64 63 
dwc_curatorial_IndividualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
65 64 
dwc_terms_individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
66 
conceptual_darwin_2003_1_0_Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_join/1,
67 
dwc_terms_occurrenceRemarks,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_join/1,
65 
dwc_terms_occurrenceRemarks,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_join/1/_alt/1,
66 
conceptual_darwin_2003_1_0_Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_join/1/_alt/2,
67 
dwc_dwcore_Remarks,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_join/1/_alt/3,
68 68 
dwc_terms_recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_first/2/_alt/1,
69 69 
conceptual_darwin_2003_1_0_FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/authorplantcode/_first/2/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec)
70 70 
-----
......
232 232 
conceptual_darwin_2003_1_0_DayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
233 233 
conceptual_darwin_2003_1_0_MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
234 234 
conceptual_darwin_2003_1_0_YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
235 
dwc_dwcore_Remarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes,
236 235 
conceptual_darwin_2003_1_0_CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
237 236 
dwc_dwcore_CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
238 237 
dwc_terms_catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
inputs/SpeciesLink/Specimen/test.xml.ref
107 107 
                                        </_alt>
108 108 
                                    </count>
109 109 
                                    <notes>
110 
                                        <_join>
110 
                                        <_alt>
111 111 
                                            <1>$dwc_terms_occurrenceRemarks</1>
112 112 
                                            <2>$conceptual_darwin_2003_1_0_Notes</2>
113 
                                        </_join>
113 
                                            <3>$dwc_dwcore_Remarks</3>
114 
                                        </_alt>
114 115 
                                    </notes>
115 116 
                                    <plantobservation>
116 117 
                                        <authorplantcode>
......
487 488 
                                            </2>
488 489 
                                        </_alt>
489 490 
                                    </determinationdate>
490 
                                    <notes>$dwc_dwcore_Remarks</notes>
491 491 
                                </taxondetermination>
492 492 
                            </taxonoccurrence>
493 493 
                            <waterdepth_m>
inputs/SpeciesLink/Specimen/new_terms.csv
4 4 
dwc_dwcore_InstitutionCode,specimenHolders,,
5 5 
dwc_dwcore_CollectionCode,collection,,
6 6 
dwc_dwcore_CatalogNumber,accessionNumber,,
7 
dwc_dwcore_Remarks,taxonRemarks,,
7 
dwc_dwcore_Remarks,occurrenceRemarks,/_alt/3,
8 8 
dwc_dwcore_ScientificName,taxonName,,
9 9 
dwc_dwcore_Kingdom,kingdom,,
10 10 
dwc_dwcore_Phylum,phylum,,
......
49 49 
dwc_terms_dateIdentified,dateIdentified,,
50 50 
dwc_terms_typeStatus,typeStatus,,
51 51 
dwc_terms_catalogNumber,accessionNumber,,
52 
dwc_terms_occurrenceRemarks,occurrenceRemarks,,
52 
dwc_terms_occurrenceRemarks,occurrenceRemarks,/_alt/1,
53 53 
dwc_terms_recordNumber,collectorNumber,/_alt/1,
54 54 
dwc_terms_recordedBy,recordedBy,,
55 55 
dwc_terms_individualCount,individualCount,,
......
142 142 
conceptual_darwin_2003_1_0_PreviousCatalogNumber,otherCatalogNumbers,,
143 143 
conceptual_darwin_2003_1_0_RelationshipType,relationshipOfResource,,
144 144 
conceptual_darwin_2003_1_0_RelatedCatalogItem,relatedResourceID,,
145 
conceptual_darwin_2003_1_0_Notes,occurrenceRemarks,,
145 
conceptual_darwin_2003_1_0_Notes,occurrenceRemarks,/_alt/2,

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