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Revision 8176

Added by Aaron Marcuse-Kubitza almost 12 years ago

inputs/input.Makefile: %/.map.csv.last_cleanup: Run fix_line_endings after canon/translate to standardize Python's \r\n line endings back to \n. This prevents issues with mixed line endings because LibreOffice (and probably Excel) treat all cell-internal line endings as \n but row line endings as whatever the file had, while text editors like jEdit translate all line endings to whatever the autodetected line ending is. (This creates spurious line ending diffs when a map spreadsheet containing multiline cells is edited in a text editor.)

View differences:

map.csv
1 
FIA,VegCore,Filter,Comments
2 
row_num,*TREE.row_num,,
3 
CN,individualObservationID,,
4 
PLT_CN,*TREE.PLT_CN,,
5 
PREV_TRE_CN,*TREE.PREV_TRE_CN,,
6 
INVYR,INVYR,,
7 
STATECD,STATECD,,
8 
UNITCD,UNITCD,,
9 
COUNTYCD,COUNTYCD,,
10 
PLOT,locationName,,
11 
SUBP,subplot,,
12 
TREE,individualCode,,
13 
CONDID,authorEventCode,,
14 
AZIMUTH,*TREE.AZIMUTH,,
15 
DIST,*TREE.DIST,,
16 
PREVCOND,*TREE.PREVCOND,,
17 
STATUSCD,*TREE.STATUSCD,,
18 
SPCD,SPCD,,
19 
SPGRPCD,*TREE.SPGRPCD,,
20 
DIA,diameterBreastHeight_in,,"""dbh in inches (convert to cm) IF DIAHTCD=1. Otherwise, measured at ground level (see DIAHTCD)."" (bboyle@email.arizona.edu/Brad_Boyle.2013-2-8.[FIA+tables+and+columns+to+import+to+BIEN.docx])"
21 
DIAHTCD,*TREE.DIAHTCD,,"""DIAHTCD=1: DIA measured at breast height (=dbh); DIAHTCD=1: DIA measured at root crown (basically, near ground). We should discuss where to put these measurements."" (bboyle@email.arizona.edu/Brad_Boyle.2013-2-8.[FIA+tables+and+columns+to+import+to+BIEN.docx])"
22 
HT,height_ft,,"""height in ft. Convert to m."" (bboyle@email.arizona.edu/Brad_Boyle.2013-2-8.[FIA+tables+and+columns+to+import+to+BIEN.docx])"
23 
HTCD,*TREE.HTCD,,
24 
ACTUALHT,*TREE.ACTUALHT,,
25 
TREECLCD,*TREE.TREECLCD,,
26 
CR,*TREE.CR,,
27 
CCLCD,*TREE.CCLCD,,
28 
TREEGRCD,*TREE.TREEGRCD,,
29 
AGENTCD,*TREE.AGENTCD,,
30 
CULL,*TREE.CULL,,
31 
DAMLOC1,*TREE.DAMLOC1,,
32 
DAMTYP1,*TREE.DAMTYP1,,
33 
DAMSEV1,*TREE.DAMSEV1,,
34 
DAMLOC2,*TREE.DAMLOC2,,
35 
DAMTYP2,*TREE.DAMTYP2,,
36 
DAMSEV2,*TREE.DAMSEV2,,
37 
DECAYCD,*TREE.DECAYCD,,
38 
STOCKING,*TREE.STOCKING,,
39 
WDLDSTEM,*TREE.WDLDSTEM,,
40 
VOLCFNET,*TREE.VOLCFNET,,
41 
VOLCFGRS,*TREE.VOLCFGRS,,
42 
VOLCSNET,*TREE.VOLCSNET,,
43 
VOLCSGRS,*TREE.VOLCSGRS,,
44 
VOLBFNET,*TREE.VOLBFNET,,
45 
VOLBFGRS,*TREE.VOLBFGRS,,
46 
VOLCFSND,*TREE.VOLCFSND,,
47 
GROWCFGS,*TREE.GROWCFGS,,
48 
GROWBFSL,*TREE.GROWBFSL,,
49 
GROWCFAL,*TREE.GROWCFAL,,
50 
MORTCFGS,*TREE.MORTCFGS,,
51 
MORTBFSL,*TREE.MORTBFSL,,
52 
MORTCFAL,*TREE.MORTCFAL,,
53 
REMVCFGS,*TREE.REMVCFGS,,
54 
REMVBFSL,*TREE.REMVBFSL,,
55 
REMVCFAL,*TREE.REMVCFAL,,
56 
DIACHECK,*TREE.DIACHECK,,
57 
MORTYR,*TREE.MORTYR,,
58 
SALVCD,*TREE.SALVCD,,
59 
UNCRCD,*TREE.UNCRCD,,
60 
CPOSCD,*TREE.CPOSCD,,
61 
CLIGHTCD,*TREE.CLIGHTCD,,
62 
CVIGORCD,*TREE.CVIGORCD,,
63 
CDENCD,*TREE.CDENCD,,
64 
CDIEBKCD,*TREE.CDIEBKCD,,
65 
TRANSCD,*TREE.TRANSCD,,
66 
TREEHISTCD,*TREE.TREEHISTCD,,
67 
DIACALC,*TREE.DIACALC,,
68 
BHAGE,*TREE.BHAGE,,
69 
TOTAGE,*TREE.TOTAGE,,
70 
CULLDEAD,*TREE.CULLDEAD,,
71 
CULLFORM,*TREE.CULLFORM,,
72 
CULLMSTOP,*TREE.CULLMSTOP,,
73 
CULLBF,*TREE.CULLBF,,
74 
CULLCF,*TREE.CULLCF,,
75 
BFSND,*TREE.BFSND,,
76 
CFSND,*TREE.CFSND,,
77 
SAWHT,*TREE.SAWHT,,
78 
BOLEHT,BOLEHT,,
79 
FORMCL,*TREE.FORMCL,,
80 
HTCALC,*TREE.HTCALC,,
81 
HRDWD_CLUMP_CD,*TREE.HRDWD_CLUMP_CD,,
82 
SITREE,*TREE.SITREE,,
83 
CREATED_BY,*TREE.CREATED_BY,,
84 
CREATED_DATE,*TREE.CREATED_DATE,,
85 
CREATED_IN_INSTANCE,*TREE.CREATED_IN_INSTANCE,,
86 
MODIFIED_BY,*TREE.MODIFIED_BY,,
87 
MODIFIED_DATE,*TREE.MODIFIED_DATE,,
88 
MODIFIED_IN_INSTANCE,*TREE.MODIFIED_IN_INSTANCE,,
89 
MORTCD,*TREE.MORTCD,,
90 
HTDMP,*TREE.HTDMP,,
91 
ROUGHCULL,*TREE.ROUGHCULL,,
92 
MIST_CL_CD,*TREE.MIST_CL_CD,,
93 
CULL_FLD,*TREE.CULL_FLD,,
94 
RECONCILECD,*TREE.RECONCILECD,,
95 
PREVDIA,*TREE.PREVDIA,,
96 
FGROWCFGS,*TREE.FGROWCFGS,,
97 
FGROWBFSL,*TREE.FGROWBFSL,,
98 
FGROWCFAL,*TREE.FGROWCFAL,,
99 
FMORTCFGS,*TREE.FMORTCFGS,,
100 
FMORTBFSL,*TREE.FMORTBFSL,,
101 
FMORTCFAL,*TREE.FMORTCFAL,,
102 
FREMVCFGS,*TREE.FREMVCFGS,,
103 
FREMVBFSL,*TREE.FREMVBFSL,,
104 
FREMVCFAL,*TREE.FREMVCFAL,,
105 
P2A_GRM_FLG,*TREE.P2A_GRM_FLG,,
106 
TREECLCD_NERS,*TREE.TREECLCD_NERS,,
107 
TREECLCD_SRS,*TREE.TREECLCD_SRS,,
108 
TREECLCD_NCRS,*TREE.TREECLCD_NCRS,,
109 
TREECLCD_RMRS,*TREE.TREECLCD_RMRS,,
110 
STANDING_DEAD_CD,*TREE.STANDING_DEAD_CD,,
111 
PREV_STATUS_CD,*TREE.PREV_STATUS_CD,,
112 
PREV_WDLDSTEM,*TREE.PREV_WDLDSTEM,,
113 
TPA_UNADJ,*TREE.TPA_UNADJ,,
114 
TPAMORT_UNADJ,*TREE.TPAMORT_UNADJ,,
115 
TPAREMV_UNADJ,*TREE.TPAREMV_UNADJ,,
116 
TPAGROW_UNADJ,*TREE.TPAGROW_UNADJ,,
117 
DRYBIO_BOLE,*TREE.DRYBIO_BOLE,,
118 
DRYBIO_TOP,*TREE.DRYBIO_TOP,,
119 
DRYBIO_STUMP,*TREE.DRYBIO_STUMP,,
120 
DRYBIO_SAPLING,*TREE.DRYBIO_SAPLING,,
121 
DRYBIO_WDLD_SPP,*TREE.DRYBIO_WDLD_SPP,,
122 
DRYBIO_BG,*TREE.DRYBIO_BG,,
123 
CARBON_AG,*TREE.CARBON_AG,,
124 
CARBON_BG,*TREE.CARBON_BG,,
125 
CYCLE,*TREE.CYCLE,,
126 
SUBCYCLE,*TREE.SUBCYCLE,,
127 
BORED_CD_PNWRS,*TREE.BORED_CD_PNWRS,,
128 
DAMLOC1_PNWRS,*TREE.DAMLOC1_PNWRS,,
129 
DAMLOC2_PNWRS,*TREE.DAMLOC2_PNWRS,,
130 
DIACHECK_PNWRS,*TREE.DIACHECK_PNWRS,,
131 
DMG_AGENT1_CD_PNWRS,*TREE.DMG_AGENT1_CD_PNWRS,,
132 
DMG_AGENT2_CD_PNWRS,*TREE.DMG_AGENT2_CD_PNWRS,,
133 
DMG_AGENT3_CD_PNWRS,*TREE.DMG_AGENT3_CD_PNWRS,,
134 
MIST_CL_CD_PNWRS,*TREE.MIST_CL_CD_PNWRS,,
135 
SEVERITY1_CD_PNWRS,*TREE.SEVERITY1_CD_PNWRS,,
136 
SEVERITY1A_CD_PNWRS,*TREE.SEVERITY1A_CD_PNWRS,,
137 
SEVERITY1B_CD_PNWRS,*TREE.SEVERITY1B_CD_PNWRS,,
138 
SEVERITY2_CD_PNWRS,*TREE.SEVERITY2_CD_PNWRS,,
139 
SEVERITY2A_CD_PNWRS,*TREE.SEVERITY2A_CD_PNWRS,,
140 
SEVERITY2B_CD_PNWRS,*TREE.SEVERITY2B_CD_PNWRS,,
141 
SEVERITY3_CD_PNWRS,*TREE.SEVERITY3_CD_PNWRS,,
142 
UNKNOWN_DAMTYP1_PNWRS,*TREE.UNKNOWN_DAMTYP1_PNWRS,,
143 
UNKNOWN_DAMTYP2_PNWRS,*TREE.UNKNOWN_DAMTYP2_PNWRS,,
144 
PREV_PNTN_SRS,*TREE.PREV_PNTN_SRS,,
145 
DISEASE_SRS,*TREE.DISEASE_SRS,,
146 
DIEBACK_SEVERITY_SRS,*TREE.DIEBACK_SEVERITY_SRS,,
1 
FIA,VegCore,Filter,Comments
2 
row_num,*TREE.row_num,,
3 
CN,individualObservationID,,
4 
PLT_CN,*TREE.PLT_CN,,
5 
PREV_TRE_CN,*TREE.PREV_TRE_CN,,
6 
INVYR,INVYR,,
7 
STATECD,STATECD,,
8 
UNITCD,UNITCD,,
9 
COUNTYCD,COUNTYCD,,
10 
PLOT,locationName,,
11 
SUBP,subplot,,
12 
TREE,individualCode,,
13 
CONDID,authorEventCode,,
14 
AZIMUTH,*TREE.AZIMUTH,,
15 
DIST,*TREE.DIST,,
16 
PREVCOND,*TREE.PREVCOND,,
17 
STATUSCD,*TREE.STATUSCD,,
18 
SPCD,SPCD,,
19 
SPGRPCD,*TREE.SPGRPCD,,
20 
DIA,diameterBreastHeight_in,,"""dbh in inches (convert to cm) IF DIAHTCD=1. Otherwise, measured at ground level (see DIAHTCD)."" (bboyle@email.arizona.edu/Brad_Boyle.2013-2-8.[FIA+tables+and+columns+to+import+to+BIEN.docx])"
21 
DIAHTCD,*TREE.DIAHTCD,,"""DIAHTCD=1: DIA measured at breast height (=dbh); DIAHTCD=1: DIA measured at root crown (basically, near ground). We should discuss where to put these measurements."" (bboyle@email.arizona.edu/Brad_Boyle.2013-2-8.[FIA+tables+and+columns+to+import+to+BIEN.docx])"
22 
HT,height_ft,,"""height in ft. Convert to m."" (bboyle@email.arizona.edu/Brad_Boyle.2013-2-8.[FIA+tables+and+columns+to+import+to+BIEN.docx])"
23 
HTCD,*TREE.HTCD,,
24 
ACTUALHT,*TREE.ACTUALHT,,
25 
TREECLCD,*TREE.TREECLCD,,
26 
CR,*TREE.CR,,
27 
CCLCD,*TREE.CCLCD,,
28 
TREEGRCD,*TREE.TREEGRCD,,
29 
AGENTCD,*TREE.AGENTCD,,
30 
CULL,*TREE.CULL,,
31 
DAMLOC1,*TREE.DAMLOC1,,
32 
DAMTYP1,*TREE.DAMTYP1,,
33 
DAMSEV1,*TREE.DAMSEV1,,
34 
DAMLOC2,*TREE.DAMLOC2,,
35 
DAMTYP2,*TREE.DAMTYP2,,
36 
DAMSEV2,*TREE.DAMSEV2,,
37 
DECAYCD,*TREE.DECAYCD,,
38 
STOCKING,*TREE.STOCKING,,
39 
WDLDSTEM,*TREE.WDLDSTEM,,
40 
VOLCFNET,*TREE.VOLCFNET,,
41 
VOLCFGRS,*TREE.VOLCFGRS,,
42 
VOLCSNET,*TREE.VOLCSNET,,
43 
VOLCSGRS,*TREE.VOLCSGRS,,
44 
VOLBFNET,*TREE.VOLBFNET,,
45 
VOLBFGRS,*TREE.VOLBFGRS,,
46 
VOLCFSND,*TREE.VOLCFSND,,
47 
GROWCFGS,*TREE.GROWCFGS,,
48 
GROWBFSL,*TREE.GROWBFSL,,
49 
GROWCFAL,*TREE.GROWCFAL,,
50 
MORTCFGS,*TREE.MORTCFGS,,
51 
MORTBFSL,*TREE.MORTBFSL,,
52 
MORTCFAL,*TREE.MORTCFAL,,
53 
REMVCFGS,*TREE.REMVCFGS,,
54 
REMVBFSL,*TREE.REMVBFSL,,
55 
REMVCFAL,*TREE.REMVCFAL,,
56 
DIACHECK,*TREE.DIACHECK,,
57 
MORTYR,*TREE.MORTYR,,
58 
SALVCD,*TREE.SALVCD,,
59 
UNCRCD,*TREE.UNCRCD,,
60 
CPOSCD,*TREE.CPOSCD,,
61 
CLIGHTCD,*TREE.CLIGHTCD,,
62 
CVIGORCD,*TREE.CVIGORCD,,
63 
CDENCD,*TREE.CDENCD,,
64 
CDIEBKCD,*TREE.CDIEBKCD,,
65 
TRANSCD,*TREE.TRANSCD,,
66 
TREEHISTCD,*TREE.TREEHISTCD,,
67 
DIACALC,*TREE.DIACALC,,
68 
BHAGE,*TREE.BHAGE,,
69 
TOTAGE,*TREE.TOTAGE,,
70 
CULLDEAD,*TREE.CULLDEAD,,
71 
CULLFORM,*TREE.CULLFORM,,
72 
CULLMSTOP,*TREE.CULLMSTOP,,
73 
CULLBF,*TREE.CULLBF,,
74 
CULLCF,*TREE.CULLCF,,
75 
BFSND,*TREE.BFSND,,
76 
CFSND,*TREE.CFSND,,
77 
SAWHT,*TREE.SAWHT,,
78 
BOLEHT,BOLEHT,,
79 
FORMCL,*TREE.FORMCL,,
80 
HTCALC,*TREE.HTCALC,,
81 
HRDWD_CLUMP_CD,*TREE.HRDWD_CLUMP_CD,,
82 
SITREE,*TREE.SITREE,,
83 
CREATED_BY,*TREE.CREATED_BY,,
84 
CREATED_DATE,*TREE.CREATED_DATE,,
85 
CREATED_IN_INSTANCE,*TREE.CREATED_IN_INSTANCE,,
86 
MODIFIED_BY,*TREE.MODIFIED_BY,,
87 
MODIFIED_DATE,*TREE.MODIFIED_DATE,,
88 
MODIFIED_IN_INSTANCE,*TREE.MODIFIED_IN_INSTANCE,,
89 
MORTCD,*TREE.MORTCD,,
90 
HTDMP,*TREE.HTDMP,,
91 
ROUGHCULL,*TREE.ROUGHCULL,,
92 
MIST_CL_CD,*TREE.MIST_CL_CD,,
93 
CULL_FLD,*TREE.CULL_FLD,,
94 
RECONCILECD,*TREE.RECONCILECD,,
95 
PREVDIA,*TREE.PREVDIA,,
96 
FGROWCFGS,*TREE.FGROWCFGS,,
97 
FGROWBFSL,*TREE.FGROWBFSL,,
98 
FGROWCFAL,*TREE.FGROWCFAL,,
99 
FMORTCFGS,*TREE.FMORTCFGS,,
100 
FMORTBFSL,*TREE.FMORTBFSL,,
101 
FMORTCFAL,*TREE.FMORTCFAL,,
102 
FREMVCFGS,*TREE.FREMVCFGS,,
103 
FREMVBFSL,*TREE.FREMVBFSL,,
104 
FREMVCFAL,*TREE.FREMVCFAL,,
105 
P2A_GRM_FLG,*TREE.P2A_GRM_FLG,,
106 
TREECLCD_NERS,*TREE.TREECLCD_NERS,,
107 
TREECLCD_SRS,*TREE.TREECLCD_SRS,,
108 
TREECLCD_NCRS,*TREE.TREECLCD_NCRS,,
109 
TREECLCD_RMRS,*TREE.TREECLCD_RMRS,,
110 
STANDING_DEAD_CD,*TREE.STANDING_DEAD_CD,,
111 
PREV_STATUS_CD,*TREE.PREV_STATUS_CD,,
112 
PREV_WDLDSTEM,*TREE.PREV_WDLDSTEM,,
113 
TPA_UNADJ,*TREE.TPA_UNADJ,,
114 
TPAMORT_UNADJ,*TREE.TPAMORT_UNADJ,,
115 
TPAREMV_UNADJ,*TREE.TPAREMV_UNADJ,,
116 
TPAGROW_UNADJ,*TREE.TPAGROW_UNADJ,,
117 
DRYBIO_BOLE,*TREE.DRYBIO_BOLE,,
118 
DRYBIO_TOP,*TREE.DRYBIO_TOP,,
119 
DRYBIO_STUMP,*TREE.DRYBIO_STUMP,,
120 
DRYBIO_SAPLING,*TREE.DRYBIO_SAPLING,,
121 
DRYBIO_WDLD_SPP,*TREE.DRYBIO_WDLD_SPP,,
122 
DRYBIO_BG,*TREE.DRYBIO_BG,,
123 
CARBON_AG,*TREE.CARBON_AG,,
124 
CARBON_BG,*TREE.CARBON_BG,,
125 
CYCLE,*TREE.CYCLE,,
126 
SUBCYCLE,*TREE.SUBCYCLE,,
127 
BORED_CD_PNWRS,*TREE.BORED_CD_PNWRS,,
128 
DAMLOC1_PNWRS,*TREE.DAMLOC1_PNWRS,,
129 
DAMLOC2_PNWRS,*TREE.DAMLOC2_PNWRS,,
130 
DIACHECK_PNWRS,*TREE.DIACHECK_PNWRS,,
131 
DMG_AGENT1_CD_PNWRS,*TREE.DMG_AGENT1_CD_PNWRS,,
132 
DMG_AGENT2_CD_PNWRS,*TREE.DMG_AGENT2_CD_PNWRS,,
133 
DMG_AGENT3_CD_PNWRS,*TREE.DMG_AGENT3_CD_PNWRS,,
134 
MIST_CL_CD_PNWRS,*TREE.MIST_CL_CD_PNWRS,,
135 
SEVERITY1_CD_PNWRS,*TREE.SEVERITY1_CD_PNWRS,,
136 
SEVERITY1A_CD_PNWRS,*TREE.SEVERITY1A_CD_PNWRS,,
137 
SEVERITY1B_CD_PNWRS,*TREE.SEVERITY1B_CD_PNWRS,,
138 
SEVERITY2_CD_PNWRS,*TREE.SEVERITY2_CD_PNWRS,,
139 
SEVERITY2A_CD_PNWRS,*TREE.SEVERITY2A_CD_PNWRS,,
140 
SEVERITY2B_CD_PNWRS,*TREE.SEVERITY2B_CD_PNWRS,,
141 
SEVERITY3_CD_PNWRS,*TREE.SEVERITY3_CD_PNWRS,,
142 
UNKNOWN_DAMTYP1_PNWRS,*TREE.UNKNOWN_DAMTYP1_PNWRS,,
143 
UNKNOWN_DAMTYP2_PNWRS,*TREE.UNKNOWN_DAMTYP2_PNWRS,,
144 
PREV_PNTN_SRS,*TREE.PREV_PNTN_SRS,,
145 
DISEASE_SRS,*TREE.DISEASE_SRS,,
146 
DIEBACK_SEVERITY_SRS,*TREE.DIEBACK_SEVERITY_SRS,,

Also available in: Unified diff