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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 7564 almost 12 years Aaron Marcuse-Kubitza lib/common.Makefile: remote server: Use jupiter...
  bin 8233 over 11 years Aaron Marcuse-Kubitza mappings/Makefile: $(vocab); bin/redmine_synony...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  inputs 8257 over 11 years Aaron Marcuse-Kubitza Added inputs/GBIF/_MySQL/MySQL.*.sql.make
  lib 8246 over 11 years Aaron Marcuse-Kubitza lib/import.sh: remake_VegBIEN_mappings(): Also ...
  mappings 8235 over 11 years Aaron Marcuse-Kubitza mappings/VegCore.htm: Renamed salvias_plots tab...
  planning 8167 almost 12 years Aaron Marcuse-Kubitza planning/timeline/timeline.2013.xls: Updated fo...
  schemas 8212 over 11 years Aaron Marcuse-Kubitza schemas/util.sql: Renamed rename_if_exists() to...
  validation 5971 about 12 years Aaron Marcuse-Kubitza Updated validation/BIEN2_Analytical_DB_overview...
  web 8228 over 11 years Aaron Marcuse-Kubitza Added web/main/svn*/, now using .htaccess to fo...
Makefile 12.1 KB 8081 almost 12 years Aaron Marcuse-Kubitza root Makefile: Installation: Fixed bug where ne...
README.TXT 19.5 KB 8251 over 11 years Aaron Marcuse-Kubitza README.TXT: Datasource setup: Install the stagi...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
8257 03/28/2013 07:42 PM Aaron Marcuse-Kubitza

Added inputs/GBIF/_MySQL/MySQL.*.sql.make
8256 03/28/2013 07:36 PM Aaron Marcuse-Kubitza

inputs/FIA/: Archived no longer used subdirs from BIEN2 export
8255 03/28/2013 07:29 PM Aaron Marcuse-Kubitza

inputs/FIA/: Archived no longer used subdirs from BIEN2 export
8254 03/28/2013 07:22 PM Aaron Marcuse-Kubitza

inputs/input.Makefile: SVN: add: Removed Source/map.csv prerequisite because it is not related to adding unversioned files in the dir. It was originally a prerequisite in order to auto-create it when the datasource dir is first created, but the map.csv recipe does not currently create metadata-only map.csvs. In the future, metadata-only map.csvs will be replaced with constant columns added to the applicable tables.
8253 03/28/2013 07:19 PM Aaron Marcuse-Kubitza

Added inputs/FIA/_archive
8252 03/28/2013 07:19 PM Aaron Marcuse-Kubitza

inputs/input.Makefile: %/map.csv: Fixed bug where can only make header.csv if map.csv does not exist, because some subdirs are metadata-only and don't have a corresponding DB table
8251 03/28/2013 07:02 PM Aaron Marcuse-Kubitza

README.TXT: Datasource setup: Install the staging tables: For a MySQL .sql export: Documented which password to use at each of the two password prompts my2pg_export will give you. You could also embed the value of the 2nd prompt in the _MySQL/*.make file using `--password="$(cat path/to/config/bien_password)"`.
8250 03/28/2013 06:56 PM Aaron Marcuse-Kubitza

README.TXT: Datasource setup: Install the staging tables: Removed requirement that `make inputs/<datasrc>/reinstall quiet=1 &` be run on vegbiendev for MySQL .sql exports, because the hostname is now set to vegbiendev instead of localhost
8249 03/28/2013 06:38 PM Aaron Marcuse-Kubitza

inputs/input.Makefile: sql/install: Use psql_script_vegbien instead of $(psqlNoSearchPath) (which uses psql_verbose_vegbien) because the insert statement for each data row should not be echoed
8248 03/28/2013 06:14 PM Aaron Marcuse-Kubitza

inputs/FIA/occurrence_all/import: Run remake_VegBIEN_mappings at end to keep mappings to next stage of import process up to date

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