include lib/common.Makefile

##### Vars/functions

# Make

SHELL := /bin/bash

# Paths

##### Environment

export PGOPTIONS = --client-min-messages=WARNING

##### General targets

remake: _always clean

%/remake: _always

%-remake: _always

%/reinstall: _always %/uninstall %/install ;

##### Installation

# public must be installed *after* inputs because some views depend on inputs

install: _always core mysql schemas/install inputs/download inputs/install \

	@$(done)

uninstall: _always rm_mysql rm_core ;

reinstall: _always uninstall install ;

##### Core: VegBIEN DB and dependencies

core: _always $(call forOs,python php postgres misc) db

	@$(done)

rm_core: _always rm_db ;

reinstall_core: _always rm_core core ;

##### Python

python-Linux: _always

	-sudo apt-get --yes install python

	-sudo pip install ordereddict

	-sudo pip install pp

python-Darwin: _always

	@# Python 2 comes preinstalled

	@echo $(emph)'Installing Python 3.2 on Mac OS X:'$(endEmph)

	@echo $(emph)'Installing python-dateutil on Mac OS X:'$(endEmph)

	@echo 'Download it for Python 2: http://labix.org/download/python-dateutil/python-dateutil-1.5.tar.gz'

	@echo 'Extract the archive'

	@echo 'Download it for Python 3: http://labix.org/download/python-dateutil/python-dateutil-2.0.tar.gz'

	@$(wait)

	@echo $(emph)'Installing pip on Mac OS X:'$(endEmph)

##### PHP

	-sudo apt-get --yes install php-http-request

	@echo $(emph)'Installing PHP PEAR and HTTP_Request on Mac OS X:'$(endEmph)

	@echo 'If needed, set $$PHPRC to your php.ini'

	@echo "Run pear install HTTP_Request"

	@$(wait)

##### PostgreSQL

define editPhppgadmin

-sudo patch /etc/phppgadmin/config.inc.php lib/phpPgAdmin.config.inc.php.diff

sudo cp -n /usr/share/phppgadmin/login.php /usr/share/phppgadmin/login.php.old

-sudo patch /usr/share/phppgadmin/login.php lib/phpPgAdmin.login.php.diff

endef

# ignore errors if patch has already been applied

editPhppgadminApacheConf = echo $$'1\n,s/deny from all/allow from all/\nwq'|\

sudo ed --loose-exit-status --verbose /etc/phppgadmin/apache.conf

nonApacheOnPort80 = $(shell sudo lsof -i :80|tail -n +2|grep -v -F apache2)

editApachePortsConf = echo $$'1\n,s/\\b80\\b/8080/g\nwq'|\

asAdmin := sudo -E -u postgres

asBien := sudo -E -u bien

pgVersion = "$$(env minor=1 bin/pg_version)"

linuxPostgresDir := /etc/postgresql/9.1/main

define pg_ctl-Linux

macPostgresDir := /Library/PostgreSQL/9.1

define macUsePostgresLib

sudo ln -s $(macPostgresDir)/lib/$(1) $(libDest)

define pg_ctl-Darwin

confirmPostgresReload = $(call confirm,Modifying postgresql.conf and pg_hba.conf)

define postgresReload-Linux

@$(confirmPostgresReload)

chmod a+r schemas/*.conf || $(asBien) chmod a+r schemas/*.conf

-$(asAdmin) mv -n $(linuxPostgresDir)/postgresql.conf $(linuxPostgresDir)/postgresql.conf.old

$(asAdmin) cp --preserve=timestamps schemas/postgresql.conf $(linuxPostgresDir)/postgresql.conf

-$(asAdmin) mv -n $(linuxPostgresDir)/pg_hba.conf $(linuxPostgresDir)/pg_hba.conf.old

$(asAdmin) cp --preserve=timestamps schemas/pg_hba.conf $(linuxPostgresDir)/pg_hba.conf

$(call pg_ctl-Linux,restart)

@$(confirmPostgresReload)

chmod a+r schemas/*.conf

-$(asAdmin) mv -n $(macPostgresDir)/data/postgresql.conf $(macPostgresDir)/data/postgresql.conf.old

$(asAdmin) cp schemas/postgresql.Mac.conf $(macPostgresDir)/data/postgresql.conf

-$(asAdmin) mv -n $(macPostgresDir)/data/pg_hba.conf $(macPostgresDir)/data/pg_hba.conf.old

$(asAdmin) cp schemas/pg_hba.Mac.conf $(macPostgresDir)/data/pg_hba.conf

$(call pg_ctl-Darwin,restart)

postgres_reload: _always

postgres-Linux: _always

	-sudo apt-get --yes install postgresql

	$(editPhppgadmin)

	$(editPhppgadminApacheConf)

	-$(MAKE) $(postgresReload-Linux)

# run pg_version inline because it needs postgresql to be installed first

postgres-Darwin: _always

	@echo $(emph)'Installing PostgreSQL on Mac OS X:'$(endEmph)

	$(foreach lib,$(macPostgresLibs),$(call macUsePostgresLib,$(lib)))

	-$(MAKE) $(postgresReload-Darwin)

postgres-: _always ; # other OSes

psqlOpts := --set ON_ERROR_STOP=1 --quiet

psqlAsAdmin := $(asAdmin) psql $(psqlOpts)

    # -E preserves env vars so PGOPTIONS is passed to psql

psqlAsAdminVegbien := $(psqlAsAdmin) vegbien

bienPassword := $(shell cat config/bien_password)

bienReadPassword := $(shell cat config/bien_read_password)

##### Misc.

misc-Linux: _always

##### VegBIEN DB

#### DB and users

confirmRmDb = $(call confirm,WARNING: This will delete your entire VegBIEN\

DB!,This includes all archived imports and staging tables.)

confirmRmPublicSchema = $(call confirm,WARNING: This will delete the current\

rmPublicSchema := $(call rmSchemaCmd,public)

db: mk_db rm_initial_public _always ;

	-echo "CREATE USER public_;"|$(psqlAsAdmin)

	-echo "CREATE USER bien PASSWORD '$(bienPassword)';"|$(psqlAsAdmin)

	-echo "CREATE USER bien_read PASSWORD '$(bienReadPassword)' IN ROLE bien \

	-echo "CREATE DATABASE vegbien WITH OWNER bien TEMPLATE template1 \

ENCODING 'UTF8' LC_COLLATE 'en_US.UTF-8' LC_CTYPE 'en_US.UTF-8';"|$(psqlAsAdmin)

	-echo "CREATE EXTENSION hstore SCHEMA pg_catalog;"|$(psqlAsAdminVegbien)

	-$(asAdmin) createlang plpython3u vegbien

	-cat config/users.sql|$(psqlAsAdmin)

# ignore errors if user/database/etc. exists

	@$(confirmRmPublicSchema)

	echo $(rmPublicSchema)|$(psqlAsAdminVegbien)

# drop public schema *as admin* because it starts out owned by postgres

rm_db: _always

	@$(confirmRmDb)

	echo "DROP USER IF EXISTS bien_read;"|$(psqlAsAdmin)

	echo "DROP USER IF EXISTS bien;"|$(psqlAsAdmin)

	echo "DROP USER IF EXISTS public_;"|$(psqlAsAdmin)

reinstall_db: _always rm_db db ;

##### MySQL

mysql: _always $(call forOs,mysql) mysql_users

	@$(done)

rm_mysql: _always rm_mysql_users ;

mysql-Linux: _always

	@echo $(emph)"If asked for MySQL root password, enter $(bienPassword)"$(endEmph)

	@$(wait)

	-sudo apt-get --yes install mysql-server

	-sudo apt-get --yes install phpmyadmin

mysql-Darwin: _always

	@echo $(emph)'Installing MySQLdb Python driver on Mac OS X 10.7 (may work on other versions):'$(endEmph)

	@echo 'Download it using "latest version" link at http://sourceforge.net/projects/mysql-python/files/'

	@echo 'Run ln -s /usr/local/mysql/lib/libmysqlclient.18.dylib /usr/lib/libmysqlclient.18.dylib'

	@echo '(From http://blog.infoentropy.com/MySQL-python_EnvironmentError_mysql_config_not_found:)'

	@echo 'Run python setup.py clean'

	@echo 'Run sudo python setup.py install'

	@$(wait)

mysql-: _always # other OSes

mysqlAsRoot := mysql --user=root --password='$(bienPassword)'

mysql_users: _always

	-echo "CREATE USER 'bien'@'localhost' IDENTIFIED BY '$(bienPassword)';"\

# ignore errors if user exists

rm_mysql_users: _always

	-echo "DROP USER 'bien_read'@'localhost';"|$(mysqlAsRoot)

# ignore errors if user exists

##### Datasources

inputs: _always inputs/all ;

inputs/install: _always

	echo '. bin/reinstall_all; wait'|bash -s

import: _always import-msg inputs/import_scrub ;

import-msg: _always

	@echo $(emph)"To import all inputs at once:"$(endEmph) . bin/import_all

	@echo

scrub: _always inputs/.TNRS/tnrs/tnrs-remake ;

verify: _always inputs/verify

	@$(done)

test: _always inputs/test

	@$(done)

test-all: _always remake test missing_mappings

	@$(done)

termsSubdirs := $(call no/,$(call wildcard/,inputs/*/))

include lib/mappings.Makefile