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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 7564 almost 12 years Aaron Marcuse-Kubitza lib/common.Makefile: remote server: Use jupiter...
  bin 8320 over 11 years Aaron Marcuse-Kubitza bin/make_analytical_db: Commented out export_an...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  inputs 8513 over 11 years Aaron Marcuse-Kubitza added .htaccess files for inputs/, schemas/ bec...
  lib 8465 over 11 years Aaron Marcuse-Kubitza lib/util.run: run_cmd (): renamed to run_args_c...
  mappings 8235 almost 12 years Aaron Marcuse-Kubitza mappings/VegCore.htm: Renamed salvias_plots tab...
  planning 8457 over 11 years Aaron Marcuse-Kubitza Moved validation/ under planning/workflow/
  schemas 8555 over 11 years Aaron Marcuse-Kubitza schemas/VegCore/VegCore.ERD.mwb: linked taxon_c...
  web 8507 over 11 years Aaron Marcuse-Kubitza web/**/.htaccess: RewriteRules: ensured flags a...
Makefile 12.1 KB 8081 almost 12 years Aaron Marcuse-Kubitza root Makefile: Installation: Fixed bug where ne...
README.TXT 19.5 KB 8516 over 11 years Aaron Marcuse-Kubitza README.TXT: Maintenance: to backup the Ubuntu V...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
8555 04/17/2013 03:04 AM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: linked taxon_concept directly to taxon_string rather than to child table taxon_name, because it creates unnecessary confusion to have two tables storing taxonomic strings. a taxon_string is anything that can be used as input to TNRS, and may or may not include a cf_aff.
8554 04/17/2013 02:57 AM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: link each taxon_string to a parsed_taxon_assertion. removed verbatim_taxon_assertion because that function is now performed by taxon_string.
8553 04/17/2013 02:48 AM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: added taxon_name, which is used by taxon_concept
8552 04/17/2013 02:37 AM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: added taxon_string, which is used by taxon_assertion
8551 04/17/2013 02:15 AM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: added unique indexes on identifying columns where possible. unique indexes differ from primary keys in that they are generally on multiple columns, while pkeys are on a text field which is the concatenation of the identifying columns.
8550 04/17/2013 01:49 AM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: hierarchical tables: made parent pointer NOT NULL so that it can be an identifying column. this requires the root(s) of the hierarchy to be indicated with a self-referential parent pointer rather than a NULL value. this also allows materializing parent elements to arbitrary levels without worrying about hitting the root, because the root's ancestors will simlpy be itself for as many levels as are needed (i.e. materializing several levels up the tree is guaranteed to produce a non-NULL entry for all levels).
8549 04/17/2013 01:36 AM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: fixed lines
8548 04/17/2013 01:35 AM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: taxon_assertion: removed fkey to taxon_concept because only parsed_taxon_assertions have a corresponding taxon_concept
8547 04/17/2013 01:31 AM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: fixed table positions
8546 04/17/2013 01:25 AM Aaron Marcuse-Kubitza

schemas/VegCore/VegCore.ERD.mwb: lined up tables

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