Revision 8624
Added by Aaron Marcuse-Kubitza over 11 years ago
| schemas/VegCore/VegCore.my.sql | ||
|---|---|---|
| 10 | 10 |
`id` VARBINARY(767) NOT NULL , |
| 11 | 11 |
`parent` VARBINARY(767) NOT NULL , |
| 12 | 12 |
`name` VARBINARY(767) NOT NULL , |
| 13 |
`first_publisher` VARBINARY(767) NULL , |
|
| 14 |
`contact` VARBINARY(767) NULL , |
|
| 13 |
`first_publisher` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 14 |
`contact` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 15 | 15 |
`info` SET('hstore') NULL ,
|
| 16 | 16 |
PRIMARY KEY (`id`) , |
| 17 | 17 |
INDEX `fk_source1_idx` (`parent` ASC) , |
| ... | ... | |
| 44 | 44 |
CREATE TABLE IF NOT EXISTS `record` ( |
| 45 | 45 |
`id` VARBINARY(767) NOT NULL , |
| 46 | 46 |
`source` VARBINARY(767) NOT NULL , |
| 47 |
`source_record_id` VARBINARY(767) NULL , |
|
| 47 |
`source_record_id` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 48 | 48 |
PRIMARY KEY (`id`) , |
| 49 | 49 |
INDEX `fk_record_source1_idx` (`source` ASC) , |
| 50 | 50 |
UNIQUE INDEX `record_unique` (`source` ASC, `source_record_id` ASC) , |
| ... | ... | |
| 128 | 128 |
CREATE TABLE IF NOT EXISTS `taxon_assertion` ( |
| 129 | 129 |
`id` VARBINARY(767) NOT NULL , |
| 130 | 130 |
`string` VARBINARY(767) NOT NULL , |
| 131 |
`taxon` VARBINARY(767) NULL , |
|
| 132 |
`cf_aff` VARBINARY(767) NULL , |
|
| 131 |
`taxon` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 132 |
`cf_aff` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 133 | 133 |
`annotations` SET('hstore') NULL ,
|
| 134 | 134 |
PRIMARY KEY (`id`) , |
| 135 | 135 |
INDEX `fk_taxon_assertion_taxon_string1_idx` (`string` ASC) , |
| ... | ... | |
| 159 | 159 |
-- ----------------------------------------------------- |
| 160 | 160 |
CREATE TABLE IF NOT EXISTS `parsed_taxon_assertion` ( |
| 161 | 161 |
`id` VARBINARY(767) NOT NULL , |
| 162 |
`matched_taxon` VARBINARY(767) NULL , |
|
| 162 |
`matched_taxon` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 163 | 163 |
`match_score` FLOAT NULL , |
| 164 | 164 |
`match_info` SET('hstore') NULL ,
|
| 165 | 165 |
PRIMARY KEY (`id`) , |
| ... | ... | |
| 184 | 184 |
-- ----------------------------------------------------- |
| 185 | 185 |
CREATE TABLE IF NOT EXISTS `taxon_string` ( |
| 186 | 186 |
`string` VARBINARY(767) NOT NULL , |
| 187 |
`parsed_taxon_assertion` VARBINARY(767) NULL , |
|
| 187 |
`parsed_taxon_assertion` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 188 | 188 |
PRIMARY KEY (`string`) , |
| 189 | 189 |
INDEX `fk_taxon_string_parsed_taxon_assertion1_idx` (`parsed_taxon_assertion` ASC) , |
| 190 | 190 |
CONSTRAINT `fk_taxon_string_parsed_taxon_assertion1` |
| ... | ... | |
| 203 | 203 |
CREATE TABLE IF NOT EXISTS `taxon_name` ( |
| 204 | 204 |
`id` VARBINARY(767) NOT NULL , |
| 205 | 205 |
`unique_name` VARBINARY(767) NOT NULL , |
| 206 |
`formal_name` VARBINARY(767) NULL , |
|
| 207 |
`taxon_name` VARBINARY(767) NULL , |
|
| 208 |
`author` VARBINARY(767) NULL , |
|
| 209 |
`common_name` VARBINARY(767) NULL , |
|
| 210 |
`rank` VARBINARY(767) NULL , |
|
| 206 |
`formal_name` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 207 |
`taxon_name` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 208 |
`author` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 209 |
`common_name` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 210 |
`rank` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 211 | 211 |
PRIMARY KEY (`id`) , |
| 212 | 212 |
INDEX `fk_taxon_concept_taxon_string10_idx` (`unique_name` ASC) , |
| 213 | 213 |
CONSTRAINT `fk_taxon_record10` |
| ... | ... | |
| 230 | 230 |
-- ----------------------------------------------------- |
| 231 | 231 |
CREATE TABLE IF NOT EXISTS `coordinates` ( |
| 232 | 232 |
`id` VARBINARY(767) NOT NULL , |
| 233 |
`latitude_deg` VARBINARY(767) NULL , |
|
| 234 |
`longitude_deg` VARBINARY(767) NULL , |
|
| 233 |
`latitude_deg` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 234 |
`longitude_deg` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 235 | 235 |
PRIMARY KEY (`id`) ) |
| 236 | 236 |
ENGINE = InnoDB |
| 237 | 237 |
DEFAULT CHARACTER SET = utf8 |
| ... | ... | |
| 243 | 243 |
-- ----------------------------------------------------- |
| 244 | 244 |
CREATE TABLE IF NOT EXISTS `place_path` ( |
| 245 | 245 |
`id` VARBINARY(767) NOT NULL , |
| 246 |
`continent` VARBINARY(767) NULL , |
|
| 247 |
`country` VARBINARY(767) NULL , |
|
| 248 |
`state_province` VARBINARY(767) NULL , |
|
| 249 |
`county` VARBINARY(767) NULL , |
|
| 250 |
`municipality` VARBINARY(767) NULL , |
|
| 246 |
`continent` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 247 |
`country` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 248 |
`state_province` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 249 |
`county` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 250 |
`municipality` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 251 | 251 |
`ranks` SET('hstore') NULL ,
|
| 252 | 252 |
PRIMARY KEY (`id`) ) |
| 253 | 253 |
ENGINE = InnoDB |
| ... | ... | |
| 261 | 261 |
CREATE TABLE IF NOT EXISTS `place` ( |
| 262 | 262 |
`id` VARBINARY(767) NOT NULL , |
| 263 | 263 |
`parent` VARBINARY(767) NOT NULL , |
| 264 |
`coordinates` VARBINARY(767) NULL , |
|
| 265 |
`path` VARBINARY(767) NULL , |
|
| 266 |
`locality` VARBINARY(767) NULL , |
|
| 264 |
`coordinates` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 265 |
`path` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 266 |
`locality` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 267 | 267 |
PRIMARY KEY (`id`) , |
| 268 | 268 |
INDEX `fk_place_coordinates1_idx` (`coordinates` ASC) , |
| 269 | 269 |
INDEX `fk_place1_idx` (`parent` ASC) , |
| ... | ... | |
| 316 | 316 |
CREATE TABLE IF NOT EXISTS `event` ( |
| 317 | 317 |
`id` VARBINARY(767) NOT NULL , |
| 318 | 318 |
`parent` VARBINARY(767) NOT NULL , |
| 319 |
`name` VARBINARY(767) NULL , |
|
| 320 |
`date_range` VARBINARY(767) NULL , |
|
| 321 |
`place` VARBINARY(767) NULL , |
|
| 322 |
`method` VARBINARY(767) NULL , |
|
| 319 |
`name` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 320 |
`date_range` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 321 |
`place` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 322 |
`method` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 323 | 323 |
PRIMARY KEY (`id`) , |
| 324 | 324 |
INDEX `fk_event_place1_idx` (`place` ASC) , |
| 325 | 325 |
INDEX `fk_event1_idx` (`parent` ASC) , |
| ... | ... | |
| 371 | 371 |
-- ----------------------------------------------------- |
| 372 | 372 |
CREATE TABLE IF NOT EXISTS `specimen` ( |
| 373 | 373 |
`id` VARBINARY(767) NOT NULL , |
| 374 |
`collection` VARBINARY(767) NULL , |
|
| 375 |
`stamping_institution` VARBINARY(767) NULL , |
|
| 376 |
`donor_institution` VARBINARY(767) NULL , |
|
| 377 |
`owner` VARBINARY(767) NULL , |
|
| 378 |
`barcode` VARBINARY(767) NULL , |
|
| 379 |
`accession_number` VARBINARY(767) NULL , |
|
| 374 |
`collection` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 375 |
`stamping_institution` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 376 |
`donor_institution` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 377 |
`owner` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 378 |
`barcode` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 379 |
`accession_number` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 380 | 380 |
PRIMARY KEY (`id`) , |
| 381 | 381 |
INDEX `fk_specimen_collection1_idx` (`collection` ASC) , |
| 382 | 382 |
INDEX `fk_specimen_organization1_idx` (`stamping_institution` ASC) , |
| ... | ... | |
| 418 | 418 |
CREATE TABLE IF NOT EXISTS `taxon_observation` ( |
| 419 | 419 |
`id` VARBINARY(767) NOT NULL , |
| 420 | 420 |
`taxon_occurrence` VARBINARY(767) NOT NULL , |
| 421 |
`voucher` VARBINARY(767) NULL , |
|
| 422 |
`growth_form` VARBINARY(767) NULL , |
|
| 421 |
`voucher` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 422 |
`growth_form` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 423 | 423 |
`cultivated` TINYINT(1) NULL , |
| 424 | 424 |
`traits` SET('hstore') NULL ,
|
| 425 | 425 |
PRIMARY KEY (`id`) , |
| ... | ... | |
| 451 | 451 |
CREATE TABLE IF NOT EXISTS `taxon_determination` ( |
| 452 | 452 |
`id` VARBINARY(767) NOT NULL , |
| 453 | 453 |
`taxon_assertion` VARBINARY(767) NOT NULL , |
| 454 |
`identified_by` VARBINARY(767) NULL , |
|
| 454 |
`identified_by` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 455 | 455 |
`fit_info` SET('hstore') NULL ,
|
| 456 | 456 |
INDEX `fk_taxon_occurrence_has_qualified_taxon1_idx` (`taxon_assertion` ASC) , |
| 457 | 457 |
PRIMARY KEY (`id`) , |
| ... | ... | |
| 482 | 482 |
-- ----------------------------------------------------- |
| 483 | 483 |
CREATE TABLE IF NOT EXISTS `taxon_occurrence` ( |
| 484 | 484 |
`id` VARBINARY(767) NOT NULL , |
| 485 |
`collector` VARBINARY(767) NULL , |
|
| 486 |
`collection_event` VARBINARY(767) NULL , |
|
| 487 |
`collector_number` VARBINARY(767) NULL , |
|
| 488 |
`current_determination` VARBINARY(767) NULL , |
|
| 489 |
`original_determination` VARBINARY(767) NULL , |
|
| 485 |
`collector` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 486 |
`collection_event` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 487 |
`collector_number` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 488 |
`current_determination` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 489 |
`original_determination` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 490 | 490 |
PRIMARY KEY (`id`) , |
| 491 | 491 |
INDEX `fk_taxon_occurrence_taxon_determination1_idx` (`original_determination` ASC) , |
| 492 | 492 |
INDEX `fk_taxon_occurrence_taxon_determination2_idx` (`current_determination` ASC) , |
| ... | ... | |
| 527 | 527 |
-- ----------------------------------------------------- |
| 528 | 528 |
CREATE TABLE IF NOT EXISTS `individual` ( |
| 529 | 529 |
`id` VARBINARY(767) NOT NULL , |
| 530 |
`tag` VARBINARY(767) NULL , |
|
| 531 |
`code` VARBINARY(767) NULL , |
|
| 530 |
`tag` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 531 |
`code` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 532 | 532 |
PRIMARY KEY (`id`) , |
| 533 | 533 |
CONSTRAINT `fk_individual_record1` |
| 534 | 534 |
FOREIGN KEY (`id` ) |
| ... | ... | |
| 593 | 593 |
`id` VARBINARY(767) NOT NULL , |
| 594 | 594 |
`according_to` VARBINARY(767) NOT NULL , |
| 595 | 595 |
`parent` VARBINARY(767) NOT NULL , |
| 596 |
`accepted_taxon` VARBINARY(767) NULL , |
|
| 596 |
`accepted_taxon` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 597 | 597 |
PRIMARY KEY (`id`) , |
| 598 | 598 |
INDEX `fk_taxon_taxon1_idx` (`parent` ASC) , |
| 599 | 599 |
INDEX `fk_taxon_concept_source1_idx` (`according_to` ASC) , |
| ... | ... | |
| 669 | 669 |
`elevation_m` DOUBLE NULL , |
| 670 | 670 |
`slope_incline_deg` DOUBLE NULL , |
| 671 | 671 |
`slope_direction_deg_N` DOUBLE NULL , |
| 672 |
`geological_context` VARBINARY(767) NULL , |
|
| 673 |
`community` VARBINARY(767) NULL , |
|
| 672 |
`geological_context` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 673 |
`community` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 674 | 674 |
`observations` SET('hstore') NULL ,
|
| 675 | 675 |
INDEX `fk_place_observation_place1_idx` (`place` ASC) , |
| 676 | 676 |
INDEX `fk_place_observation_geological_context1_idx` (`geological_context` ASC) , |
| ... | ... | |
| 724 | 724 |
-- ----------------------------------------------------- |
| 725 | 725 |
CREATE TABLE IF NOT EXISTS `plot` ( |
| 726 | 726 |
`id` VARBINARY(767) NOT NULL , |
| 727 |
`name` VARBINARY(767) NULL , |
|
| 727 |
`name` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 728 | 728 |
`area_m2` DOUBLE NULL , |
| 729 |
`bounding_box` VARBINARY(767) NULL , |
|
| 729 |
`bounding_box` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 730 | 730 |
PRIMARY KEY (`id`) , |
| 731 | 731 |
CONSTRAINT `fk_subplot_place1` |
| 732 | 732 |
FOREIGN KEY (`id` ) |
| ... | ... | |
| 1065 | 1065 |
-- ----------------------------------------------------- |
| 1066 | 1066 |
CREATE TABLE IF NOT EXISTS `taxon_path` ( |
| 1067 | 1067 |
`id` VARBINARY(767) NOT NULL , |
| 1068 |
`family` VARBINARY(767) NULL , |
|
| 1069 |
`genus` VARBINARY(767) NULL , |
|
| 1070 |
`specific_epithet` VARBINARY(767) NULL , |
|
| 1068 |
`family` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 1069 |
`genus` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 1070 |
`specific_epithet` VARBINARY(767) NULL DEFAULT NULL ,
|
|
| 1071 | 1071 |
`ranks` SET('hstore') NULL ,
|
| 1072 | 1072 |
PRIMARY KEY (`id`) , |
| 1073 | 1073 |
CONSTRAINT `fk_taxon_path_taxon_name1` |
Also available in: Unified diff
schemas/VegCore/VegCore.ERD.mwb: re-synced with VegCore.my.sql: step 2: `DEFAULT NULL` added on all nullable columns