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7772
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aaronmk
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-- phpMyAdmin SQL Dump
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-- version 2.11.3deb1ubuntu1.3
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-- http://www.phpmyadmin.net
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--
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-- Host: localhost
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-- Generation Time: Oct 13, 2011 at 10:41 AM
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-- Server version: 5.0.51
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-- PHP Version: 5.2.4-2ubuntu5.17
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SET SQL_MODE="NO_AUTO_VALUE_ON_ZERO";
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--
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-- Database: `bien2`
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--
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-- --------------------------------------------------------
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--
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-- Table structure for table `bien_genus_family`
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--
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CREATE TABLE IF NOT EXISTS `bien_genus_family` (
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`family` varchar(250) character set utf8 NOT NULL,
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`genus` varchar(150) character set utf8 collate utf8_bin default NULL,
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`tot_families` int(1) default NULL,
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KEY `genus` (`genus`),
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KEY `family` (`family`),
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KEY `tot_families` (`tot_families`)
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) ENGINE=MyISAM DEFAULT CHARSET=latin1;
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-- --------------------------------------------------------
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--
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-- Table structure for table `clade`
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--
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CREATE TABLE IF NOT EXISTS `clade` (
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`cladeID` int(11) unsigned NOT NULL,
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`parentCladeID` int(11) unsigned default NULL,
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`cladeNameStd` varchar(250) NOT NULL,
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`rank` varchar(50) default NULL,
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`isHybrid` int(1) unsigned NOT NULL,
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`family` varchar(100) default NULL,
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`leftIndex` int(11) unsigned default NULL,
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`rightIndex` int(11) unsigned default NULL,
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`source` varchar(25) default NULL,
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`majorPlantGroup` varchar(45) default NULL,
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`embryophytes` varchar(45) default NULL,
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`vascularPlants` varchar(45) default NULL,
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`seedPlants` varchar(45) default NULL,
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`floweringPlants` varchar(45) default NULL,
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PRIMARY KEY USING BTREE (`cladeID`),
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KEY `nameStaging_isHybrid` (`isHybrid`),
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KEY `nameStaging_family` (`family`),
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KEY `nameStaging_leftIndex` (`leftIndex`),
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KEY `nameStaging_rightIndex` (`rightIndex`),
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KEY `idx_source` (`source`),
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KEY `nameStaging_rank` USING BTREE (`rank`),
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KEY `Index_majorPlantGroup` USING BTREE (`majorPlantGroup`),
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KEY `Index_embryophytes` USING BTREE (`embryophytes`),
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KEY `Index_seedPlants` USING BTREE (`seedPlants`),
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KEY `Index_vascularPlants` USING BTREE (`vascularPlants`),
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KEY `Index_floweringPlants` USING BTREE (`floweringPlants`),
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KEY `nameStaging_parentCladeID` USING BTREE (`parentCladeID`),
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KEY `nameStaging_cladeNameStd` USING BTREE (`cladeNameStd`)
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) ENGINE=MyISAM DEFAULT CHARSET=utf8;
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-- --------------------------------------------------------
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--
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-- Table structure for table `cladeName`
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--
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CREATE TABLE IF NOT EXISTS `cladeName` (
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`cladeNameID` int(11) NOT NULL auto_increment,
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`cladeID` int(10) unsigned NOT NULL,
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`cladeName` varchar(250) NOT NULL,
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`cladeNameUnique` varchar(300) default NULL,
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`nameStatus` varchar(50) default NULL,
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`source` varchar(45) default NULL,
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PRIMARY KEY USING BTREE (`cladeNameID`),
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KEY `idx_cladeID` USING BTREE (`cladeID`),
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KEY `Index_source` (`source`),
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KEY `idx_name` USING BTREE (`cladeName`),
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KEY `idx_nameStatus` USING BTREE (`nameStatus`)
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) ENGINE=MyISAM DEFAULT CHARSET=utf8 AUTO_INCREMENT=89884 ;
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-- --------------------------------------------------------
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--
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-- Table structure for table `DataSource`
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--
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CREATE TABLE IF NOT EXISTS `DataSource` (
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`DataSourceID` int(10) unsigned NOT NULL auto_increment,
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`DataSourceName` varchar(255) NOT NULL,
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`DataSourceType` varchar(255) NOT NULL,
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PRIMARY KEY (`DataSourceID`),
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KEY `DataSourceName` (`DataSourceName`),
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KEY `DataSourceType` (`DataSourceType`)
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| 101 |
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COMMENT='Data sources for plots or specimens' AUTO_INCREMENT=30 ;
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-- --------------------------------------------------------
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--
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-- Table structure for table `geoIndividualObservation`
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--
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CREATE TABLE IF NOT EXISTS `geoIndividualObservation` (
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`ID` int(11) unsigned NOT NULL COMMENT 'Links 1:1 with DBPlotID',
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`countryISO` varchar(25) default NULL,
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`countryStd` varchar(150) default NULL,
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`isInCountry` int(1) default NULL,
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`countryDistError` double default NULL,
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`stateProvinceStd` varchar(150) default NULL,
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`isInStateProvince` int(1) default NULL,
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`stateProvinceDistError` double default NULL,
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`countyParishStd` varchar(150) default NULL,
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`isInCountyParish` int(1) default NULL,
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`countyParishDistError` double default NULL,
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`isValidLatLong` int(1) default NULL,
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`isCultivated` int(1) default '0',
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`isCultivatedReason` varchar(255) default NULL,
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PRIMARY KEY (`ID`),
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KEY `geoI_countryISO_NDX` (`countryISO`),
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KEY `geoI_countryStd_NDX` (`countryStd`),
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KEY `geoI_isInCountry_NDX` (`isInCountry`),
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KEY `geoI_countryDistError_NDX` (`countryDistError`),
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KEY `geoI_stateProvinceStd_NDX` (`stateProvinceStd`),
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KEY `geoI_isInStateProvince_NDX` (`isInStateProvince`),
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KEY `geoI_stateProvinceDistError_NDX` (`stateProvinceDistError`),
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KEY `geoI_countyParishStd_NDX` (`countyParishStd`),
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KEY `geoI_isInCountyParish_NDX` (`isInCountyParish`),
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KEY `geoI_countyParishDistError_NDX` (`countyParishDistError`),
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KEY `geoI_isValidLatLong_NDX` (`isValidLatLong`),
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KEY `geoI_isCultivated` (`isCultivated`),
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KEY `geoI_isCultivatedReason` (`isCultivatedReason`)
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) ENGINE=InnoDB DEFAULT CHARSET=utf8;
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-- --------------------------------------------------------
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--
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-- Table structure for table `geoPlotMetaDataDimension`
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--
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CREATE TABLE IF NOT EXISTS `geoPlotMetaDataDimension` (
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`ID` int(11) unsigned NOT NULL COMMENT 'Links 1:1 with DBPlotID',
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`countryISO` varchar(25) default NULL,
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| 149 |
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`countryStd` varchar(150) default NULL,
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| 150 |
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`isInCountry` int(1) default NULL,
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`countryDistError` double default NULL,
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| 152 |
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`stateProvinceStd` varchar(150) default NULL,
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| 153 |
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`isInStateProvince` int(1) default NULL,
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`stateProvinceDistError` double default NULL,
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`countyParishStd` varchar(150) default NULL,
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| 156 |
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`isInCountyParish` int(1) default NULL,
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| 157 |
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`countyParishDistError` double default NULL,
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| 158 |
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`isValidLatLong` int(1) default NULL,
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| 159 |
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`isCultivated` int(1) default '0',
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`isCultivatedReason` varchar(255) default NULL,
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PRIMARY KEY (`ID`),
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KEY `geoP_countryISO_NDX` (`countryISO`),
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KEY `geoP_countryStd_NDX` (`countryStd`),
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KEY `geoP_isInCountry_NDX` (`isInCountry`),
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KEY `geoP_countryDistError_NDX` (`countryDistError`),
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KEY `geoP_stateProvinceStd_NDX` (`stateProvinceStd`),
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KEY `geoP_isInStateProvince_NDX` (`isInStateProvince`),
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KEY `geoP_stateProvinceDistError_NDX` (`stateProvinceDistError`),
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KEY `geoP_countyParishStd_NDX` (`countyParishStd`),
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| 170 |
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KEY `geoP_isInCountyParish_NDX` (`isInCountyParish`),
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| 171 |
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KEY `geoP_countyParishDistError_NDX` (`countyParishDistError`),
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KEY `geoP_isValidLatLong_NDX` (`isValidLatLong`),
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KEY `geoP_isCultivated` (`isCultivated`),
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KEY `geo_isCultivatedReason` (`isCultivatedReason`)
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) ENGINE=InnoDB DEFAULT CHARSET=utf8;
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| 176 |
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| 177 |
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-- --------------------------------------------------------
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| 178 |
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--
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-- Table structure for table `IndividualObservation`
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| 181 |
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--
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CREATE TABLE IF NOT EXISTS `IndividualObservation` (
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`ObservationID` int(11) NOT NULL auto_increment,
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| 185 |
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`ObservationType` int(11) default NULL,
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| 186 |
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`PlotTreeTag` varchar(32) collate utf8_bin default NULL,
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| 187 |
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`DBPlotID` int(11) default NULL,
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| 188 |
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`SpecimenCatalogNO` varchar(64) collate utf8_bin default NULL,
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| 189 |
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`ObservationSpecimenID` int(11) default NULL,
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| 190 |
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`LatestDateCollected` date default NULL,
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| 191 |
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`DecimalLatitude` decimal(10,5) default NULL,
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| 192 |
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`DecimalLongitude` decimal(10,5) default NULL,
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| 193 |
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`NumberOfStems` int(11) default NULL,
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| 194 |
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`BasalDiameter` decimal(10,5) default NULL,
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| 195 |
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`Height` decimal(10,5) default NULL,
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| 196 |
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`TaxonomyID` int(11) NOT NULL,
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| 197 |
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`RawTreeID` int(10) default NULL,
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| 198 |
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`test` tinyint(3) unsigned NOT NULL default '0',
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PRIMARY KEY (`ObservationID`),
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| 200 |
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KEY `RefPlotMetaDataDimension411` (`DBPlotID`),
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| 201 |
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KEY `RefTaxonDimension381` (`TaxonomyID`),
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| 202 |
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KEY `ObservationSpecimenID` (`ObservationSpecimenID`)
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| 203 |
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin AUTO_INCREMENT=22296066 ;
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| 204 |
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-- --------------------------------------------------------
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| 206 |
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--
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| 208 |
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-- Table structure for table `IndividualObservationMeasurement`
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| 209 |
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--
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CREATE TABLE IF NOT EXISTS `IndividualObservationMeasurement` (
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`ObservationID` int(11) NOT NULL,
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| 213 |
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`StemNO` int(11) NOT NULL auto_increment,
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| 214 |
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`ObservationNO` int(11) NOT NULL,
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| 215 |
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`PrimaryStem` int(11) default NULL,
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| 216 |
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`DBH` decimal(10,5) default NULL,
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| 217 |
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`HOM` decimal(10,5) default NULL,
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| 218 |
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`test` tinyint(3) unsigned NOT NULL default '0',
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| 219 |
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PRIMARY KEY (`ObservationID`,`StemNO`,`ObservationNO`),
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| 220 |
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KEY `RefIndividualObservation11` (`ObservationID`)
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| 221 |
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) ENGINE=MyISAM DEFAULT CHARSET=utf8 COLLATE=utf8_bin AUTO_INCREMENT=1 ;
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| 222 |
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| 223 |
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-- --------------------------------------------------------
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| 224 |
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| 225 |
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--
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| 226 |
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-- Table structure for table `ObservationSpecimen`
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| 227 |
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--
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| 228 |
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| 229 |
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CREATE TABLE IF NOT EXISTS `ObservationSpecimen` (
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| 230 |
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`ObservationSpecimenID` int(11) NOT NULL auto_increment,
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| 231 |
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`DBSourceID` int(11) NOT NULL,
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| 232 |
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`Continent` varchar(64) collate utf8_bin default NULL,
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| 233 |
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`Country` varchar(100) collate utf8_bin default NULL,
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| 234 |
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`StateProvince` varchar(64) collate utf8_bin default NULL,
|
| 235 |
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`verbatimCountry` varchar(100) collate utf8_bin default NULL,
|
| 236 |
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`County` varchar(100) collate utf8_bin default NULL,
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| 237 |
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`Locality` varchar(1024) collate utf8_bin default NULL,
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| 238 |
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`Collector` varchar(256) collate utf8_bin default NULL,
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| 239 |
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`IdentifiedBy` varchar(128) collate utf8_bin default NULL,
|
| 240 |
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`IdentifiedDate` date default NULL,
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| 241 |
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`CoordinateUncertainty` decimal(10,5) default NULL,
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| 242 |
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`CoordinateUncertaintyUnits` varchar(10) collate utf8_bin default NULL,
|
| 243 |
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`VegetationCategory` varchar(32) collate utf8_bin default NULL,
|
| 244 |
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`test` tinyint(3) unsigned NOT NULL,
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| 245 |
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`Cultivated` int(1) NOT NULL,
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| 246 |
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`CollectionNumber` varchar(24) collate utf8_bin default NULL,
|
| 247 |
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PRIMARY KEY (`ObservationSpecimenID`),
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| 248 |
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KEY `RefSpecimenSourceData421` (`DBSourceID`),
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| 249 |
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KEY `DBSourceID` (`DBSourceID`,`Continent`,`Country`,`StateProvince`,`County`,`Locality`(255),`Collector`(255),`IdentifiedBy`,`IdentifiedDate`,`CoordinateUncertainty`,`CoordinateUncertaintyUnits`,`VegetationCategory`)
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| 250 |
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) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin AUTO_INCREMENT=8578890 ;
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| 251 |
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| 252 |
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-- --------------------------------------------------------
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| 253 |
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| 254 |
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--
|
| 255 |
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-- Table structure for table `PlotAggregateFact`
|
| 256 |
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--
|
| 257 |
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|
| 258 |
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CREATE TABLE IF NOT EXISTS `PlotAggregateFact` (
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| 259 |
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`DBPlotID` int(11) NOT NULL,
|
| 260 |
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`PlotTimeID` int(11) NOT NULL,
|
| 261 |
|
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`TotalIndividuals` int(11) default NULL,
|
| 262 |
|
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`TotalIndividualsAbove1cm` int(11) default NULL,
|
| 263 |
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`TotalIndividualsAbove2.5cm` int(11) default NULL,
|
| 264 |
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`TotalIndividualsAbove10cm` int(11) default NULL,
|
| 265 |
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`PercentCover` decimal(10,5) default NULL,
|
| 266 |
|
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`TaxonomyID` int(11) NOT NULL,
|
| 267 |
|
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`del` int(1) unsigned default NULL,
|
| 268 |
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`test` tinyint(3) unsigned NOT NULL default '0',
|
| 269 |
|
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PRIMARY KEY (`DBPlotID`,`PlotTimeID`,`TaxonomyID`),
|
| 270 |
|
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KEY `RefPlotMetaDataDimension61` (`DBPlotID`),
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| 271 |
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KEY `RefPlotTimeDimension371` (`PlotTimeID`),
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| 272 |
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KEY `RefTaxonDimension181` (`TaxonomyID`),
|
| 273 |
|
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KEY `DBPlotID_2` (`DBPlotID`,`PlotTimeID`,`TaxonomyID`),
|
| 274 |
|
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KEY `DBPlotID_3` (`DBPlotID`,`PlotTimeID`,`TaxonomyID`),
|
| 275 |
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KEY `DBPlotID_4` (`DBPlotID`,`PlotTimeID`,`TaxonomyID`)
|
| 276 |
|
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
|
| 277 |
|
|
|
| 278 |
|
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-- --------------------------------------------------------
|
| 279 |
|
|
|
| 280 |
|
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--
|
| 281 |
|
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-- Table structure for table `PlotMetaDataDimension`
|
| 282 |
|
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--
|
| 283 |
|
|
|
| 284 |
|
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CREATE TABLE IF NOT EXISTS `PlotMetaDataDimension` (
|
| 285 |
|
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`DBPlotID` int(11) NOT NULL auto_increment,
|
| 286 |
|
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`DBSourceName` varchar(64) collate utf8_bin default NULL,
|
| 287 |
|
|
`ContactName` varchar(32) collate utf8_bin default NULL,
|
| 288 |
|
|
`ContactEmail` varchar(32) collate utf8_bin default NULL,
|
| 289 |
|
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`ContactTelephone` varchar(32) collate utf8_bin default NULL,
|
| 290 |
|
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`Continent` varchar(64) collate utf8_bin default NULL,
|
| 291 |
|
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`Country` varchar(32) collate utf8_bin default NULL,
|
| 292 |
|
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`StateProvince` varchar(64) collate utf8_bin default NULL,
|
| 293 |
|
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`verbatimCountry` varchar(64) collate utf8_bin default NULL,
|
| 294 |
|
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`County` varchar(64) collate utf8_bin default NULL,
|
| 295 |
|
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`Locality` varchar(256) collate utf8_bin default NULL,
|
| 296 |
|
|
`VegetationCategory` varchar(32) collate utf8_bin default NULL,
|
| 297 |
|
|
`PlotCD` bigint(32) default NULL,
|
| 298 |
|
|
`PlotName` varchar(32) collate utf8_bin default NULL,
|
| 299 |
|
|
`PlotCensusMethod` varchar(32) collate utf8_bin default NULL,
|
| 300 |
|
|
`PlotArea` varchar(10) collate utf8_bin default NULL,
|
| 301 |
|
|
`PlotAreaUnits` varchar(10) collate utf8_bin default NULL,
|
| 302 |
|
|
`PlotShape` varchar(32) collate utf8_bin default NULL,
|
| 303 |
|
|
`PlotDecimalLatitude` decimal(10,5) default NULL,
|
| 304 |
|
|
`PlotDecimalLongitude` decimal(10,5) default NULL,
|
| 305 |
|
|
`CoordinateUncertainty` decimal(10,5) default NULL,
|
| 306 |
|
|
`CoordinateUncertaintyUnits` varchar(10) collate utf8_bin default NULL,
|
| 307 |
|
|
`PlotReferenceX` decimal(10,5) default NULL,
|
| 308 |
|
|
`PlotReferenceY` decimal(10,5) default NULL,
|
| 309 |
|
|
`PlotMaxDBH` decimal(10,5) default NULL,
|
| 310 |
|
|
`PlotMinDBH` decimal(10,5) default NULL,
|
| 311 |
|
|
`test` tinyint(3) unsigned NOT NULL default '0',
|
| 312 |
|
|
PRIMARY KEY (`DBPlotID`),
|
| 313 |
|
|
KEY `DBSourceName` (`DBSourceName`),
|
| 314 |
|
|
KEY `PlotName_2` (`PlotName`,`DBSourceName`)
|
| 315 |
|
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin AUTO_INCREMENT=342877 ;
|
| 316 |
|
|
|
| 317 |
|
|
-- --------------------------------------------------------
|
| 318 |
|
|
|
| 319 |
|
|
--
|
| 320 |
|
|
-- Table structure for table `PlotTimeDimension`
|
| 321 |
|
|
--
|
| 322 |
|
|
|
| 323 |
|
|
CREATE TABLE IF NOT EXISTS `PlotTimeDimension` (
|
| 324 |
|
|
`PlotTimeID` int(11) NOT NULL auto_increment,
|
| 325 |
|
|
`CensusID` int(11) default NULL,
|
| 326 |
|
|
`CensusName` varchar(32) collate utf8_bin default NULL,
|
| 327 |
|
|
`CensusStartDate` date default NULL,
|
| 328 |
|
|
`CensusEndDate` date default NULL,
|
| 329 |
|
|
`DBPlotID` int(11) NOT NULL,
|
| 330 |
|
|
`test` tinyint(3) unsigned NOT NULL default '0',
|
| 331 |
|
|
PRIMARY KEY (`PlotTimeID`),
|
| 332 |
|
|
KEY `Ref613` (`DBPlotID`),
|
| 333 |
|
|
KEY `CensusName_2` (`CensusName`,`DBPlotID`,`CensusID`),
|
| 334 |
|
|
KEY `CensusName_3` (`CensusName`,`DBPlotID`,`CensusID`),
|
| 335 |
|
|
KEY `CensusName_4` (`CensusName`,`DBPlotID`,`CensusID`),
|
| 336 |
|
|
KEY `CensusName_5` (`CensusName`,`CensusID`),
|
| 337 |
|
|
KEY `CensusName_6` (`CensusName`,`CensusID`),
|
| 338 |
|
|
KEY `CensusName_7` (`CensusName`,`DBPlotID`,`CensusID`),
|
| 339 |
|
|
KEY `CensusName_8` (`CensusName`,`DBPlotID`,`CensusID`)
|
| 340 |
|
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin AUTO_INCREMENT=341814 ;
|
| 341 |
|
|
|
| 342 |
|
|
-- --------------------------------------------------------
|
| 343 |
|
|
|
| 344 |
|
|
--
|
| 345 |
|
|
-- Table structure for table `SpecimenSourceData`
|
| 346 |
|
|
--
|
| 347 |
|
|
|
| 348 |
|
|
CREATE TABLE IF NOT EXISTS `SpecimenSourceData` (
|
| 349 |
|
|
`DBSourceID` int(11) NOT NULL auto_increment,
|
| 350 |
|
|
`DBSourceName` varchar(64) collate utf8_bin default NULL,
|
| 351 |
|
|
`ContactName` varchar(32) collate utf8_bin default NULL,
|
| 352 |
|
|
`ContactEmail` varchar(32) collate utf8_bin default NULL,
|
| 353 |
|
|
`ContactTelephone` varchar(32) collate utf8_bin default NULL,
|
| 354 |
|
|
`SpecimenInstitutionCD` varchar(128) collate utf8_bin default NULL,
|
| 355 |
|
|
`SpecimenCollectionCD` varchar(128) collate utf8_bin default NULL,
|
| 356 |
|
|
`test` tinyint(3) unsigned NOT NULL default '0',
|
| 357 |
|
|
PRIMARY KEY (`DBSourceID`),
|
| 358 |
|
|
KEY `DBSourceName` (`DBSourceName`),
|
| 359 |
|
|
KEY `SpecimenInstitutionCD` (`SpecimenInstitutionCD`,`SpecimenCollectionCD`,`DBSourceName`)
|
| 360 |
|
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin AUTO_INCREMENT=131797 ;
|
| 361 |
|
|
|
| 362 |
|
|
-- --------------------------------------------------------
|
| 363 |
|
|
|
| 364 |
|
|
--
|
| 365 |
|
|
-- Table structure for table `TaxonDataSource`
|
| 366 |
|
|
--
|
| 367 |
|
|
|
| 368 |
|
|
CREATE TABLE IF NOT EXISTS `TaxonDataSource` (
|
| 369 |
|
|
`TaxonDataSourceID` int(10) unsigned NOT NULL auto_increment,
|
| 370 |
|
|
`DataSourceID` int(10) unsigned NOT NULL,
|
| 371 |
|
|
`TaxonomyID` int(10) unsigned NOT NULL,
|
| 372 |
|
|
`TotalObservations` int(10) unsigned default NULL,
|
| 373 |
|
|
`GeoreferencedObservations` int(10) unsigned default NULL,
|
| 374 |
|
|
PRIMARY KEY (`TaxonDataSourceID`),
|
| 375 |
|
|
KEY `DataSourceID` (`DataSourceID`),
|
| 376 |
|
|
KEY `TaxonomyID` (`TaxonomyID`)
|
| 377 |
|
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COMMENT='Links taxa to data sources in which they are used' AUTO_INCREMENT=731596 ;
|
| 378 |
|
|
|
| 379 |
|
|
-- --------------------------------------------------------
|
| 380 |
|
|
|
| 381 |
|
|
--
|
| 382 |
|
|
-- Table structure for table `TaxonDimension`
|
| 383 |
|
|
--
|
| 384 |
|
|
|
| 385 |
|
|
CREATE TABLE IF NOT EXISTS `TaxonDimension` (
|
| 386 |
|
|
`TaxonomyID` int(11) NOT NULL auto_increment,
|
| 387 |
|
|
`FamilyName` varchar(64) collate utf8_bin default NULL,
|
| 388 |
|
|
`GenusName` varchar(64) collate utf8_bin default NULL,
|
| 389 |
|
|
`SpecificEpithet` varchar(64) collate utf8_bin default NULL,
|
| 390 |
|
|
`InfraspecificEpithet` varchar(64) collate utf8_bin default NULL,
|
| 391 |
|
|
`InfraspecificRank` varchar(64) collate utf8_bin default NULL,
|
| 392 |
|
|
`Authority` varchar(128) collate utf8_bin default NULL,
|
| 393 |
|
|
`is_plotName` int(1) unsigned default '0',
|
| 394 |
|
|
`taxonAuthorityVerbatim` varchar(250) collate utf8_bin default NULL,
|
| 395 |
|
|
`taxonMatched` varchar(250) collate utf8_bin default NULL,
|
| 396 |
|
|
`taxonMatchedAuthority` varchar(250) collate utf8_bin default NULL,
|
| 397 |
|
|
`unmatchedTerms` varchar(250) collate utf8_bin default NULL,
|
| 398 |
|
|
`matchScore` decimal(3,2) default NULL,
|
| 399 |
|
|
`taxonMatchedAcceptance` varchar(1) collate utf8_bin default NULL,
|
| 400 |
|
|
`familyCorrected` varchar(50) collate utf8_bin default NULL,
|
| 401 |
|
|
`genusCorrected` varchar(150) collate utf8_bin default NULL,
|
| 402 |
|
|
`speciesCorrected` varchar(255) collate utf8_bin default NULL,
|
| 403 |
|
|
`taxonCorrected` varchar(250) collate utf8_bin default NULL,
|
| 404 |
|
|
`authorityCorrected` varchar(250) collate utf8_bin default NULL,
|
| 405 |
|
|
`taxonCorrectedTnrsID` int(10) unsigned default NULL,
|
| 406 |
|
|
`taxonCorrectedRank` varchar(25) collate utf8_bin default NULL,
|
| 407 |
|
|
`taxonCorrectedAcceptance` varchar(1) collate utf8_bin default NULL,
|
| 408 |
|
|
`morphospecies` varchar(250) collate utf8_bin default NULL,
|
| 409 |
|
|
`taxonMorphospecies` varchar(250) collate utf8_bin default NULL,
|
| 410 |
|
|
`is_scrubbed` int(1) unsigned NOT NULL default '0',
|
| 411 |
|
|
PRIMARY KEY (`TaxonomyID`),
|
| 412 |
|
|
KEY `FamilyName` (`FamilyName`),
|
| 413 |
|
|
KEY `GenusName` (`GenusName`),
|
| 414 |
|
|
KEY `SpecificEpithet` (`SpecificEpithet`),
|
| 415 |
|
|
KEY `InfraspecificRank` (`InfraspecificRank`),
|
| 416 |
|
|
KEY `FamilyName_2` (`FamilyName`,`GenusName`,`SpecificEpithet`,`InfraspecificEpithet`,`InfraspecificRank`,`Authority`),
|
| 417 |
|
|
KEY `InfraspecificEpithet` (`InfraspecificEpithet`),
|
| 418 |
|
|
KEY `taxonAuthorityVerbatim` (`taxonAuthorityVerbatim`),
|
| 419 |
|
|
KEY `taxonCorrected` (`taxonCorrected`),
|
| 420 |
|
|
KEY `taxonMorphospecies` (`taxonMorphospecies`),
|
| 421 |
|
|
KEY `is_scrubbed` (`is_scrubbed`),
|
| 422 |
|
|
KEY `TD_familyCorrected` (`familyCorrected`),
|
| 423 |
|
|
KEY `TD_taxonMatchedAcceptance` (`taxonMatchedAcceptance`),
|
| 424 |
|
|
KEY `TD_taxonCorrectedAcceptance` (`taxonCorrectedAcceptance`),
|
| 425 |
|
|
KEY `TD_taxonCorrectedRank` (`taxonCorrectedRank`),
|
| 426 |
|
|
KEY `taxonCorrectedTnrsID` (`taxonCorrectedTnrsID`),
|
| 427 |
|
|
KEY `TD_is_plotName` (`is_plotName`),
|
| 428 |
|
|
KEY `genusCorrected_idx` (`genusCorrected`),
|
| 429 |
|
|
KEY `speciesCorrected` (`speciesCorrected`)
|
| 430 |
|
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin ROW_FORMAT=FIXED AUTO_INCREMENT=987490 ;
|
| 431 |
|
|
|
| 432 |
|
|
-- --------------------------------------------------------
|
| 433 |
|
|
|
| 434 |
|
|
--
|
| 435 |
|
|
-- Table structure for table `TaxonDimension_bak`
|
| 436 |
|
|
--
|
| 437 |
|
|
|
| 438 |
|
|
CREATE TABLE IF NOT EXISTS `TaxonDimension_bak` (
|
| 439 |
|
|
`TaxonomyID` int(11) NOT NULL auto_increment,
|
| 440 |
|
|
`FamilyName` varchar(64) collate utf8_bin default NULL,
|
| 441 |
|
|
`GenusName` varchar(64) collate utf8_bin default NULL,
|
| 442 |
|
|
`SpecificEpithet` varchar(64) collate utf8_bin default NULL,
|
| 443 |
|
|
`InfraspecificEpithet` varchar(64) collate utf8_bin default NULL,
|
| 444 |
|
|
`InfraspecificRank` varchar(64) collate utf8_bin default NULL,
|
| 445 |
|
|
`Authority` varchar(128) collate utf8_bin default NULL,
|
| 446 |
|
|
`is_plotName` int(1) unsigned default '0',
|
| 447 |
|
|
`taxonAuthorityVerbatim` varchar(250) collate utf8_bin default NULL,
|
| 448 |
|
|
`taxonMatched` varchar(250) collate utf8_bin default NULL,
|
| 449 |
|
|
`taxonMatchedAuthority` varchar(250) collate utf8_bin default NULL,
|
| 450 |
|
|
`unmatchedTerms` varchar(250) collate utf8_bin default NULL,
|
| 451 |
|
|
`matchScore` decimal(3,2) default NULL,
|
| 452 |
|
|
`taxonMatchedAcceptance` varchar(1) collate utf8_bin default NULL,
|
| 453 |
|
|
`familyCorrected` varchar(50) collate utf8_bin default NULL,
|
| 454 |
|
|
`genusCorrected` varchar(150) collate utf8_bin default NULL,
|
| 455 |
|
|
`speciesCorrected` varchar(255) collate utf8_bin default NULL,
|
| 456 |
|
|
`taxonCorrected` varchar(250) collate utf8_bin default NULL,
|
| 457 |
|
|
`authorityCorrected` varchar(250) collate utf8_bin default NULL,
|
| 458 |
|
|
`taxonCorrectedTnrsID` int(10) unsigned default NULL,
|
| 459 |
|
|
`taxonCorrectedRank` varchar(25) collate utf8_bin default NULL,
|
| 460 |
|
|
`taxonCorrectedAcceptance` varchar(1) collate utf8_bin default NULL,
|
| 461 |
|
|
`morphospecies` varchar(250) collate utf8_bin default NULL,
|
| 462 |
|
|
`taxonMorphospecies` varchar(250) collate utf8_bin default NULL,
|
| 463 |
|
|
`is_scrubbed` int(1) unsigned NOT NULL default '0',
|
| 464 |
|
|
PRIMARY KEY (`TaxonomyID`),
|
| 465 |
|
|
KEY `FamilyName` (`FamilyName`),
|
| 466 |
|
|
KEY `GenusName` (`GenusName`),
|
| 467 |
|
|
KEY `SpecificEpithet` (`SpecificEpithet`),
|
| 468 |
|
|
KEY `InfraspecificRank` (`InfraspecificRank`),
|
| 469 |
|
|
KEY `FamilyName_2` (`FamilyName`,`GenusName`,`SpecificEpithet`,`InfraspecificEpithet`,`InfraspecificRank`,`Authority`),
|
| 470 |
|
|
KEY `InfraspecificEpithet` (`InfraspecificEpithet`),
|
| 471 |
|
|
KEY `taxonAuthorityVerbatim` (`taxonAuthorityVerbatim`),
|
| 472 |
|
|
KEY `taxonCorrected` (`taxonCorrected`),
|
| 473 |
|
|
KEY `taxonMorphospecies` (`taxonMorphospecies`),
|
| 474 |
|
|
KEY `is_scrubbed` (`is_scrubbed`),
|
| 475 |
|
|
KEY `TD_familyCorrected` (`familyCorrected`),
|
| 476 |
|
|
KEY `TD_taxonMatchedAcceptance` (`taxonMatchedAcceptance`),
|
| 477 |
|
|
KEY `TD_taxonCorrectedAcceptance` (`taxonCorrectedAcceptance`),
|
| 478 |
|
|
KEY `TD_taxonCorrectedRank` (`taxonCorrectedRank`),
|
| 479 |
|
|
KEY `taxonCorrectedTnrsID` (`taxonCorrectedTnrsID`),
|
| 480 |
|
|
KEY `TD_is_plotName` (`is_plotName`),
|
| 481 |
|
|
KEY `genusCorrected_idx` (`genusCorrected`),
|
| 482 |
|
|
KEY `speciesCorrected` (`speciesCorrected`)
|
| 483 |
|
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin ROW_FORMAT=FIXED AUTO_INCREMENT=987490 ;
|
| 484 |
|
|
|
| 485 |
|
|
-- --------------------------------------------------------
|
| 486 |
|
|
|
| 487 |
|
|
--
|
| 488 |
|
|
-- Table structure for table `TaxonObservation`
|
| 489 |
|
|
--
|
| 490 |
|
|
|
| 491 |
|
|
CREATE TABLE IF NOT EXISTS `TaxonObservation` (
|
| 492 |
|
|
`TaxonomyObservationID` int(11) NOT NULL auto_increment,
|
| 493 |
|
|
`TaxonomyID` int(11) default NULL,
|
| 494 |
|
|
`PlotOrSpecimenFlag` int(11) default NULL,
|
| 495 |
|
|
`DBPlotID` int(11) NOT NULL,
|
| 496 |
|
|
`DBSourceID` int(11) NOT NULL,
|
| 497 |
|
|
`GBIFScientificNameOriginal` varchar(64) collate utf8_bin default NULL,
|
| 498 |
|
|
`GBIFFamilyOriginal` varchar(64) collate utf8_bin default NULL,
|
| 499 |
|
|
`GBIFGenusOriginal` varchar(64) collate utf8_bin default NULL,
|
| 500 |
|
|
`test` tinyint(3) unsigned NOT NULL default '0',
|
| 501 |
|
|
PRIMARY KEY (`TaxonomyObservationID`),
|
| 502 |
|
|
KEY `RefTaxonDimension301` (`TaxonomyID`),
|
| 503 |
|
|
KEY `Ref614` (`DBPlotID`),
|
| 504 |
|
|
KEY `TaxonomyID_2` (`TaxonomyID`,`DBPlotID`),
|
| 505 |
|
|
KEY `TaxonomyID_3` (`TaxonomyID`,`DBPlotID`),
|
| 506 |
|
|
KEY `TaxonomyID_4` (`TaxonomyID`,`DBPlotID`)
|
| 507 |
|
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin AUTO_INCREMENT=1622693 ;
|
| 508 |
|
|
|
| 509 |
|
|
-- --------------------------------------------------------
|
| 510 |
|
|
|
| 511 |
|
|
--
|
| 512 |
|
|
-- Table structure for table `TraitObservation`
|
| 513 |
|
|
--
|
| 514 |
|
|
|
| 515 |
|
|
CREATE TABLE IF NOT EXISTS `TraitObservation` (
|
| 516 |
|
|
`TraitObservationID` int(11) unsigned NOT NULL auto_increment,
|
| 517 |
|
|
`TaxonomyID` int(11) unsigned NOT NULL,
|
| 518 |
|
|
`Family` varchar(100) default NULL,
|
| 519 |
|
|
`Genus` varchar(100) default NULL,
|
| 520 |
|
|
`SpecificEpithet` varchar(100) default NULL,
|
| 521 |
|
|
`InfraspecificRank` varchar(25) default NULL,
|
| 522 |
|
|
`InfraspecificEpithet` varchar(100) default NULL,
|
| 523 |
|
|
`Taxon` varchar(255) default NULL,
|
| 524 |
|
|
`AuthorOfScientificName` varchar(255) default NULL,
|
| 525 |
|
|
`TaxonAuthor` varchar(255) default NULL,
|
| 526 |
|
|
`Habit` varchar(50) default NULL,
|
| 527 |
|
|
`TraitName` varchar(200) default NULL,
|
| 528 |
|
|
`TraitValue` varchar(100) default NULL,
|
| 529 |
|
|
`Unit` varchar(100) default NULL,
|
| 530 |
|
|
`Method` varchar(255) default NULL,
|
| 531 |
|
|
`Region` varchar(100) default NULL,
|
| 532 |
|
|
`Country` varchar(100) default NULL,
|
| 533 |
|
|
`StateProvince` varchar(100) default NULL,
|
| 534 |
|
|
`LowerPolitical` varchar(100) default NULL,
|
| 535 |
|
|
`LocalityDescription` varchar(100) default NULL,
|
| 536 |
|
|
`VerbatimLatitude` varchar(150) default NULL,
|
| 537 |
|
|
`VerbatimLongitude` varchar(150) default NULL,
|
| 538 |
|
|
`VerbatimElevation` varchar(150) default NULL,
|
| 539 |
|
|
`Source` varchar(100) default NULL,
|
| 540 |
|
|
`URLSource` varchar(100) default NULL,
|
| 541 |
|
|
`SourceCitation` varchar(1000) default NULL,
|
| 542 |
|
|
`SourceID` varchar(255) default NULL,
|
| 543 |
|
|
`VisitingDate` varchar(100) default NULL,
|
| 544 |
|
|
`ReferenceID` int(11) unsigned default NULL,
|
| 545 |
|
|
`Access` varchar(100) default NULL,
|
| 546 |
|
|
`Project_PI` varchar(255) default NULL,
|
| 547 |
|
|
`Project_PI_contact` varchar(100) default NULL,
|
| 548 |
|
|
`Observation` varchar(255) default NULL,
|
| 549 |
|
|
`Authorship` varchar(255) default NULL,
|
| 550 |
|
|
`AuthorshipContact` varchar(100) default NULL,
|
| 551 |
|
|
PRIMARY KEY (`TraitObservationID`),
|
| 552 |
|
|
KEY `TaxonomyID` (`TaxonomyID`),
|
| 553 |
|
|
KEY `Family` (`Family`),
|
| 554 |
|
|
KEY `Taxon` (`Taxon`),
|
| 555 |
|
|
KEY `TraitName` (`TraitName`),
|
| 556 |
|
|
KEY `ReferenceID` (`ReferenceID`),
|
| 557 |
|
|
KEY `TaxonAuthor` (`TaxonAuthor`)
|
| 558 |
|
|
) ENGINE=InnoDB DEFAULT CHARSET=utf8 COMMENT='Species trait observations' AUTO_INCREMENT=140286 ;
|
| 559 |
|
|
|
| 560 |
|
|
-- --------------------------------------------------------
|
| 561 |
|
|
|
| 562 |
|
|
--
|
| 563 |
|
|
-- Table structure for table `viewFullOccurrence`
|
| 564 |
|
|
--
|
| 565 |
|
|
|
| 566 |
|
|
CREATE TABLE IF NOT EXISTS `viewFullOccurrence` (
|
| 567 |
|
|
`OccurID` int(11) NOT NULL auto_increment,
|
| 568 |
|
|
`DBPlotID` int(11) default NULL,
|
| 569 |
|
|
`ObservationID` int(11) default NULL,
|
| 570 |
|
|
`Family` varchar(64) default NULL,
|
| 571 |
|
|
`TaxonomyID` int(11) default NULL,
|
| 572 |
|
|
`OrigGenus` varchar(64) default NULL,
|
| 573 |
|
|
`OrigSpecies` varchar(64) default NULL,
|
| 574 |
|
|
`TaxonCorrected` varchar(250) default NULL,
|
| 575 |
|
|
`Genus` varchar(64) default NULL,
|
| 576 |
|
|
`Species` varchar(64) default NULL,
|
| 577 |
|
|
`Latin` varchar(64) default NULL,
|
| 578 |
|
|
`Rank` varchar(16) default NULL,
|
| 579 |
|
|
`Accepted` varchar(2) default NULL,
|
| 580 |
|
|
`TaxonMorphoSpecies` varchar(255) default NULL,
|
| 581 |
|
|
`isCultivated` int(1) default '0',
|
| 582 |
|
|
`isCultivatedReason` varchar(255) default NULL,
|
| 583 |
|
|
`CountryOrig` varchar(100) default NULL,
|
| 584 |
|
|
`CountryStd` varchar(150) default NULL,
|
| 585 |
|
|
`CountryError` double default NULL,
|
| 586 |
|
|
`ProvinceStd` varchar(64) default NULL,
|
| 587 |
|
|
`ProvinceError` double default NULL,
|
| 588 |
|
|
`County` varchar(64) default NULL,
|
| 589 |
|
|
`Plot` varchar(32) default NULL,
|
| 590 |
|
|
`PlotArea` varchar(10) default NULL,
|
| 591 |
|
|
`Latitude` decimal(10,5) default NULL,
|
| 592 |
|
|
`Longitude` decimal(10,5) default NULL,
|
| 593 |
|
|
`isValidLatLong` int(1) default NULL,
|
| 594 |
|
|
`Date` date default NULL,
|
| 595 |
|
|
`SurveyType` varchar(10) default NULL,
|
| 596 |
|
|
`Abund` int(11) default NULL,
|
| 597 |
|
|
`Abund1` int(11) default NULL,
|
| 598 |
|
|
`Abund2.5` int(11) default NULL,
|
| 599 |
|
|
`Abund10` int(11) default NULL,
|
| 600 |
|
|
`PctCover` decimal(10,5) default NULL,
|
| 601 |
|
|
`DataSource` varchar(128) default NULL,
|
| 602 |
|
|
PRIMARY KEY (`OccurID`),
|
| 603 |
|
|
KEY `DBPlotID` (`DBPlotID`),
|
| 604 |
|
|
KEY `ObservationID` (`ObservationID`),
|
| 605 |
|
|
KEY `Family` (`Family`(16)),
|
| 606 |
|
|
KEY `TaxonCorrected` (`TaxonCorrected`(25)),
|
| 607 |
|
|
KEY `Latin` (`Latin`(25)),
|
| 608 |
|
|
KEY `TaxonomyID` (`TaxonomyID`),
|
| 609 |
|
|
KEY `Genus` (`Genus`(16)),
|
| 610 |
|
|
KEY `Species` (`Species`(20)),
|
| 611 |
|
|
KEY `ORIGLATIN` (`OrigGenus`(16),`OrigSpecies`(20)),
|
| 612 |
|
|
KEY `CountryStd` (`CountryStd`),
|
| 613 |
|
|
KEY `SurveyType` (`SurveyType`),
|
| 614 |
|
|
KEY `DataSource` (`DataSource`),
|
| 615 |
|
|
KEY `Rank` (`Rank`),
|
| 616 |
|
|
KEY `Accepted` (`Accepted`),
|
| 617 |
|
|
KEY `isCultivated` (`isCultivated`),
|
| 618 |
|
|
KEY `isCultivatedReason` (`isCultivatedReason`),
|
| 619 |
|
|
KEY `isValidLatLong` (`isValidLatLong`),
|
| 620 |
|
|
KEY `CountryError` (`CountryError`),
|
| 621 |
|
|
KEY `ProvinceError` (`ProvinceError`)
|
| 622 |
|
|
) ENGINE=MyISAM DEFAULT CHARSET=utf8 AUTO_INCREMENT=12050437 ;
|
| 623 |
|
|
|
| 624 |
|
|
-- --------------------------------------------------------
|
| 625 |
|
|
|
| 626 |
|
|
--
|
| 627 |
|
|
-- Table structure for table `viewFullOccurrence_bak20110825`
|
| 628 |
|
|
--
|
| 629 |
|
|
|
| 630 |
|
|
CREATE TABLE IF NOT EXISTS `viewFullOccurrence_bak20110825` (
|
| 631 |
|
|
`OccurID` int(11) NOT NULL auto_increment,
|
| 632 |
|
|
`DBPlotID` int(11) default NULL,
|
| 633 |
|
|
`ObservationID` int(11) default NULL,
|
| 634 |
|
|
`Family` varchar(64) default NULL,
|
| 635 |
|
|
`TaxonomyID` int(11) default NULL,
|
| 636 |
|
|
`OrigGenus` varchar(64) default NULL,
|
| 637 |
|
|
`OrigSpecies` varchar(64) default NULL,
|
| 638 |
|
|
`TaxonCorrected` varchar(250) default NULL,
|
| 639 |
|
|
`Genus` varchar(64) default NULL,
|
| 640 |
|
|
`Species` varchar(64) default NULL,
|
| 641 |
|
|
`Latin` varchar(64) default NULL,
|
| 642 |
|
|
`Rank` varchar(16) default NULL,
|
| 643 |
|
|
`Accepted` varchar(2) default NULL,
|
| 644 |
|
|
`TaxonMorphoSpecies` varchar(255) default NULL,
|
| 645 |
|
|
`CountryOrig` varchar(100) default NULL,
|
| 646 |
|
|
`CountryStd` varchar(150) default NULL,
|
| 647 |
|
|
`CountryError` double default NULL,
|
| 648 |
|
|
`ProvinceStd` varchar(64) default NULL,
|
| 649 |
|
|
`ProvinceError` double default NULL,
|
| 650 |
|
|
`County` varchar(64) default NULL,
|
| 651 |
|
|
`Plot` varchar(32) default NULL,
|
| 652 |
|
|
`PlotArea` varchar(10) default NULL,
|
| 653 |
|
|
`Latitude` decimal(10,5) default NULL,
|
| 654 |
|
|
`Longitude` decimal(10,5) default NULL,
|
| 655 |
|
|
`Date` date default NULL,
|
| 656 |
|
|
`SurveyType` varchar(10) default NULL,
|
| 657 |
|
|
`Abund` int(11) default NULL,
|
| 658 |
|
|
`Abund1` int(11) default NULL,
|
| 659 |
|
|
`Abund2.5` int(11) default NULL,
|
| 660 |
|
|
`Abund10` int(11) default NULL,
|
| 661 |
|
|
`PctCover` decimal(10,5) default NULL,
|
| 662 |
|
|
`DataSource` varchar(128) default NULL,
|
| 663 |
|
|
PRIMARY KEY (`OccurID`),
|
| 664 |
|
|
KEY `DBPlotID` (`DBPlotID`),
|
| 665 |
|
|
KEY `ObservationID` (`ObservationID`),
|
| 666 |
|
|
KEY `Family` (`Family`(16)),
|
| 667 |
|
|
KEY `TaxonCorrected` (`TaxonCorrected`(25)),
|
| 668 |
|
|
KEY `ORIGLATIN` (`OrigGenus`(16),`OrigSpecies`(20)),
|
| 669 |
|
|
KEY `CountryStd` (`CountryStd`),
|
| 670 |
|
|
KEY `SurveyType` (`SurveyType`),
|
| 671 |
|
|
KEY `DataSource` (`DataSource`),
|
| 672 |
|
|
KEY `Family_2` (`Family`),
|
| 673 |
|
|
KEY `Rank` (`Rank`),
|
| 674 |
|
|
KEY `CountryError` (`CountryError`),
|
| 675 |
|
|
KEY `ProvinceError` (`ProvinceError`),
|
| 676 |
|
|
KEY `TaxonomyID` (`TaxonomyID`),
|
| 677 |
|
|
KEY `Latin` (`Latin`(25)),
|
| 678 |
|
|
KEY `Accepted` (`Accepted`)
|
| 679 |
|
|
) ENGINE=MyISAM DEFAULT CHARSET=utf8 AUTO_INCREMENT=12050437 ;
|
