BIEN links
Quick links
- Wiki
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- syntax
- syntax
- Wiki
- To do
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- srcs
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- VegCore
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- BIEN
- local
- vegbiendev
- vegbiendev
- nimoy
- PostgreSQL
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- mod_rewrite
- VegPath
- DwC
- VegBank
- SALVIAS
- TNRS
BIEN
TWiki
- default site-wide preferences - TWikiPreferences < TWiki < TWiki
- Local customisations of site-wide preferences - TWikiPreferences < Main < TWiki
- BlackListPlugin < TWiki < TWiki
- /README.txt - BIEN Geo - NCEAS Projects
- page's description: Redmine
- 11-02-24 Kickoff Meeting - Scientific Opportunities Team - iPlant Collaborative Wiki
- Activity Participants: botanical information network Working Group 24th—28th October 2011 | NCEAS
- BI_Project_Charter - iPToL - iPlant Collaborative Wiki
- BIEN - / - Repository - NCEAS Projects
- page's description: Redmine
- BIEN - Wiki - NCEAS Projects
- page's description: Redmine
- BIEN Project | iPlant Collaborative Web Portal
- bien.pdf
- Bookmarks
- Botanical Information and Ecology Network
- Botanical Information and Ecology Network
- page's description: NCEAS Project 12290: Developing an integrated botanical information network to investigate the ecological impacts of global climate change on plant biodiversity
- iPlant Collaborative Web Portal | The iPlant Collaborative: Empowering a New Plant Biology
- Munin :: nceas.ucsb.edu :: vegbiendev.nceas.ucsb.edu
- NCEAS Project 12290: botanical information network | NCEAS
- nimoy
- nimoy phpPgAdmin
- Overview of NCEAS Computing and GIS Support
- Sources « Botanical Information and Ecology Network
- starscream phpPgAdmin
- Taxonomic Name Resolution Service
iPlant
- Global call-in numbers
- page's description: 85
- System Dashboard - The iPlant Collaborative JIRA
- TNRS - The iPlant Collaborative JIRA
- iPlant User Management
- Notation Guide - iPlant Collaborative Wiki
NCEAS
- Connect - NCEAS Web IRC
- Identity :: People Finder
- Index of /~aaronmk
- Main Page - NCEAS Knowledge Base
- NCEAS KB
- NCEAS Webmail :: Welcome to NCEAS Webmail
- Off-Campus Access: Login
- Staff Computer Setup - NCEAS Knowledge Base
- support
- user_accounts [NCEAS Computing Services Knowledge Base]
- Welcome to NCEAS | NCEAS
resources
BitTorrent Sync
-
SECURITY WARNING:
There is an important security hole in the Linux version of BitTorrent Sync: when btsync is run with no arguments, it makes all your files suddenly *world-readable and world-writable*, via a publicly-accessible, unprotected web interface (the WebUI). The WebUI by default allows anyone on the web to create a sync folder to view and edit any files in directories writable by you.
To fix this, you apparently *must* use a config file (with the --config option) which is appropriately secured by setting webui > password. If you are currently running btsync without a secured config file, you should run `killall btsync` to turn off the WebUI. You can use `lsof -i` to verify that the WebUI is not running.
The security hole has been reported at http://forum.bittorrent.com/topic/18612-security-hole-in-linux-webui-makes-all-your-files-publicly-accessible/ , but it's not clear when/whether they will fix it.
WebUI
-
located at http://hostname:8888/gui/
- BitTorrent WebUI - Videos & Guides - Help - BitTorrent - Delivering the World's Content
- page's description: BitTorrent is a fast and easy client for Windows and Mac with many features.
- Question about the webUI - BitTorrent Sync - BitTorrent Forums
- page's description: Question about the webUI - posted in BitTorrent Sync: Because I'd like to run this on a headless linux server, I'm obviously not going to be connecting from localhost. When I connect from a LAN interface on it's LAN IP I get "Invalid request" as shown below:-
However, if I create an SSH tunnel so I'm connecting from localhost (In this case, 0.0.0.0:8889 --> localhost:8888) it works:-
Is there anyway to get BitTorrent Sync to accept LAN requests? Keeping an S...
- .SyncIgnore is great but... - BitTorrent Sync - BitTorrent Forums
- page's description: .SyncIgnore is great but... - posted in BitTorrent Sync: .SyncIgnore is a file where you can filter out files you don't want synced. However it seems that when I put files in here bittorrent decides to delete those files rather than leave them un-touched. That is unexpected. Is this a bug? Expected behavior? Am I using it wrong?
Cheers
- Install on Linux - BitTorrent Sync - BitTorrent Forums
- page's description: Page 1 of 2 - Install on Linux - posted in BitTorrent Sync: I just got my invite for Sync
really like it so far, but i am not able to install the Linux version (SyncApp_i386-1.0.63).
my Linux expert says it is missing its header.
do we do something wrong or is this an bug?
- Move synced directory - BitTorrent Sync - BitTorrent Forums
- page's description: Move synced directory - posted in BitTorrent Sync: I would like to move where a directory is synced to without re-syncing it.
Suppose I have given a read-only key to 10 other people, and now I want it stored in a different place on my machine. Is there any way of doing that without having them all delete the old and add a new key?
DBs
MDB
- Linux MDB driver - alpha version
- page's description: OpenOffice.org: The Free, Open Source Office Suite
- The Electrofriend: How to compile mdbtools on Mac OS X 10.4 and 10.5
- MDB Tools - Unlocking Your Data
- How to Open and Edit MS Access Databases from Mac OS X
- page's description: Information on how to read and query MS Access databases from Mac OS X.
SQL
MySQL
dynamic SQL
- How To have Dynamic SQL in MySQL Stored Procedure - Stack Overflow
- MySQL – Writing dynamic SQL in stored procedures « IT Integrated Business Solutions
- MySQL :: Re: Dynamic SQl in Triggers/Procdures
- "Stored procedures called from triggers operate under the same restrictions as triggers, i.e., no dynamic SQL is allowed."
MySQL Workbench
- MySQL :: Download MySQL Workbench
- MySQL Bugs: #40167: no method to show hidden relationships again
- MySQL Bugs: #46626: Unable to copy-paste selected tables between two instances of Workbench
- MySQL Bugs: #67322: MySQL Workbench not installing Ubuntu 12.10
- MySQL Workbench Loses Saved Connections - Database Administrators Stack Exchange
- mysql - ERROR: Error 1005: Can't create table (errno: 121) - Stack Overflow
string primary keys
- mysql - performance penalty of strings as primary keys? - Stack Overflow
- "we use varchar(32) for primary keys (GUIDs) and we haven't met performance issues of this. Our product is a web site with extreme overload and is critical to be stable. We use SQL Server 2005."
vs. other SQL DBs
- The Codex » Do Not Pass This Way Again
-
arguments for MySQL:
"as a user, a company head, and a person who, frankly has no time to screw around with crappy front-ends [which were] ignored because the backend is *so amazingly awesome*" (may be referring to lack of sufficiently-good phpMyAdmin equivalents for other DBs?)
- ariejan.net
- page's description: a blog by ariejan de vroom about software engineering and craftsmanship.
- casting - How to use the CAST function correctly in a MySql SELECT statement? - Stack Overflow
- "VARCHAR isn't a valid type for the CAST function, but CHAR is."
- Creating a MySQL View directly in phpMyAdmin | Sky on Tech
- Getting out of MySQL Character Set Hell < Blue Box Blog
- How Do I Enable Remote Access To MySQL Database Server?
- page's description: MySQL Remote Access - A step-by-step guide to enable remote access to a MySQL database server under Linux, UNIX and BSD operating systems.
- How do I quickly rename a mysql database (change schema name)? - Stack Overflow
- linux - How to output MySQL query results in csv format? - Stack Overflow
- mysql - #1071 - Specified key was too long; max key length is 767 bytes - Stack Overflow
- MySQL – Extract or Restore a Single Table From a Huge mysqldump File
- page's description: A while back, I wrote an article that explained some awk magic for extracting the restore information for a single table from a mysqldump file. Since then I've created a Perl script that accomplishes the same thing, but is a little more flexible.
- MySQL :: MySQL 5.1 Reference Manual :: 13.2.6 LOAD DATA INFILE Syntax
- MySQL :: MySQL 5.1 Reference Manual :: 13.2.8.1 SELECT ... INTO Syntax
- MySQL :: MySQL 5.5 Reference Manual :: 10.1.9.2 CONVERT() and CAST()
- MySQL :: MySQL 5.5 Reference Manual :: 11.3 Date and Time Types
- MySQL :: MySQL 5.5 Reference Manual :: 11.4.2 The BINARY and VARBINARY Types
- MySQL :: MySQL 5.5 Reference Manual :: 13.1.15 CREATE PROCEDURE and CREATE FUNCTION Syntax
- MySQL :: MySQL 5.5 Reference Manual :: 13.5 SQL Syntax for Prepared Statements
- MySQL :: MySQL 5.5 Reference Manual :: 13.6.7.3 RESIGNAL Syntax
- MySQL :: MySQL 5.5 Reference Manual :: 13.6.7.4 SIGNAL Syntax
- MySQL :: MySQL 5.5 Reference Manual :: 13.7.1.3 GRANT Syntax
- MySQL :: MySQL 5.5 Reference Manual :: 13.7.5.11 SHOW CREATE PROCEDURE Syntax
- MySQL :: MySQL 5.5 Reference Manual :: 14.3.15 Limits on InnoDB Tables
- MySQL :: MySQL 5.5 Reference Manual :: 14.4.2.1 Overview of Fast Index Creation
- MySQL :: MySQL 5.5 Reference Manual :: 4.5.1.1 mysql Options
- MySQL :: MySQL 5.5 Reference Manual :: 4.5.1.2 mysql Commands
- MySQL :: MySQL 5.5 Reference Manual :: 8.3.8 Comparison of B-Tree and Hash Indexes
- MySQL :: MySQL 5.5 Reference Manual :: 9.2 Schema Object Names
- MySQL :: MySQL 5.5 Reference Manual :: MySQL Glossary :: clustered index
- "Because modifying the columns of the clustered index is an expensive operation, choose primary columns that are rarely or never updated."
- MySQL :: MySQL 5.6 Reference Manual :: 13.1.1 ALTER DATABASE Syntax
- MySQL :: MySQL 5.6 Reference Manual :: 4.5.4 mysqldump — A Database Backup Program
- MySQL :: Re: How to Restore a particular table from the mysqldump of a whole database?
- MySQL :: Re: latin1_bin vs latin1_general_cs
- MySQL :: Re: utf8_unicode_ci vs utf8_general_ci
- MySQL Bugs: #62207: Table comments are truncated to 66 characters rather than the 2048 the db allows
- MySQL Lists: mysql: Re: Why does mysql drop index very very slow in a large table?
- MySQL Lists: mysql: RE: Why does mysql drop index very very slow in a large table?
- MySQL on Mac OS X
- MySQLdb
- Need MySQL 4 to ignore ALTER TABLE errors - Stack Overflow
- What's the opposite of mysqldump to load data back into a database? | drupal.org
- Extend phpMyAdmin Session Timeout Value (Expired Session)
PostgreSQL
disk space
- PostgreSQL: Disk space not released after TRUNCATE - Database Administrators
- [#JENA-28] Drop Temporary Tables in Postgres (PATCH) - ASF JIRA
- VACUUM FULL - PostgreSQL wiki
- PostgreSQL: Documentation: 8.3: CLUSTER
- Re: ERROR: could not write block 196261 of temporary file: No space left
- PostgreSQL: PostgreSQL: In place UPDATE
- disk suddenly full, postgres using all space - Untangle Forums
- page's description: A customer box that's never used more than a few gigs of space suddenly ran out of disk space so bad the captive portal page wouldn't load properly.
doc
- PostgreSQL: Documentation: 8.3: Array Functions and Operators
- PostgreSQL: Documentation: 8.3: Control Structures
- PostgreSQL: Documentation: 8.3: Error Codes
- PostgreSQL: Documentation: 8.3: Errors and Messages
- PostgreSQL: Documentation: 8.3: hstore
- PostgreSQL: Documentation: 8.3: Object Identifier Types
- PostgreSQL: Documentation: 8.3: pg_enum
- PostgreSQL: Documentation: 8.3: PL/Python Functions
- PostgreSQL: Documentation: 8.3: ROLLBACK TO SAVEPOINT
- PostgreSQL: Documentation: 8.3: Row and Array Comparisons
- PostgreSQL: Documentation: 8.3: String Functions and Operators
- PostgreSQL: Documentation: 8.3: System Information Functions
- PostgreSQL: Documentation: 8.3: The Statistics Collector
- PostgreSQL: Documentation: 8.4: Errors and Messages
- PostgreSQL: Documentation: 8.4: Function Overloading
- PostgreSQL: Documentation: 8.4: Query Language (SQL) Functions
- PostgreSQL: Documentation: 8.4: WITH Queries (Common Table Expressions)
- PostgreSQL: Documentation: 9.0: Calling Functions
- PostgreSQL: Documentation: 9.1: COMMENT
- PostgreSQL: Documentation: 9.1: CREATE OPERATOR CLASS
- PostgreSQL: Documentation: 9.1: CREATE RULE
- PostgreSQL: Documentation: 9.1: CREATE TYPE
- PostgreSQL: Documentation: 9.1: hstore
- PostgreSQL: Documentation: 9.1: Object Identifier Types
- PostgreSQL: Documentation: 9.1: PL/Python - Python Procedural Language
- PostgreSQL: Documentation: 9.1: Procedural Languages
- PostgreSQL: Documentation: 9.1: psql
- PostgreSQL: Documentation: 9.1: Query Language (SQL) Functions
- PostgreSQL: Documentation: Manuals: Log File Maintenance
- PostgreSQL: Documentation: Manuals: PostgreSQL 9.1: PostgreSQL 9.1.1 Documentation
- PostgreSQL: Documentation: Manuals: psql
- PostgreSQL: Documentation: Manuals: System Administration Functions
- PostgreSQL: Documentation: Manuals: Template Databases
- PostgreSQL: Documentation: Manuals: WITH Queries (Common Table Expressions)
- PostgreSQL: Documentation: 9.1: Binary Data Types
invalid byte sequence errors
- postgresql - How to solve UTF8 invalid byte sequence copy errors on a restore, when the source database is encoded in UTF8? - Database Administrators Stack Exchange
- invalid byte sequence for encoding "UTF8": 0x00 - Grokbase
- page's description: (6 replies) Hi, I've got another problem. I sometimes get the following SQLException when doing an insert: ERROR: invalid byte sequence for encoding "UTF8": 0x00 Exception: org.postgresql.util.PSQLException org.postgresql.core.v3.QueryExecutorImpl.receiveErrorResponse(QueryExecutorImpl.java:1525) org.postgresql.core.v3.QueryExecutorImpl.processResults(QueryExecutorImpl.java:1309) org.postgresql.core.v3.QueryExecutorImpl.execute(QueryExecutorImpl.java:188)
MySQL
- Converting from other Databases to PostgreSQL - PostgreSQL wiki
- Converting MySQL to PostgreSQL - Wikibooks, open books for an open world
- my2pg.pl
- MySQL vs PostgreSQL - WikiVS
- "PostgreSQL will feature the MERGE clause in a future version [5], which follows the SQL:2008 standard. This can do the same as MySQL's non-standard 'INSERT IGNORE','REPLACE' and 'INSERT ... ON DUPLICATE UPDATE' statements but with more granularity."
"MySQL triggers are also not activated by cascading updates and deletes even when caused by a SQL statement"
- sql - How can you represent inheritance in a database? - Stack Overflow
PostGIS
- Installing PostGIS on Ubuntu
- PostgreSQL [KyngChaos Wiki]
- page's description: Mac OS X installers for PostgreSQL, and GIS extensions PostGIS and pgRouting. Built for Lion and Snow Leopard, 64bit only. NOTE: I do not support any other Postgres distribution in my extensions. Please do not try to install PostGIS in another Postgres and then ask why it won't install.
- postgresql - Struggling with enabling a PostGIS database on Mac - GIS
- Install Postgres 9.1, PostGIS and create PostGIS template on Ubuntu 11.10 Oneiric Ocelot — Gist
- » PostgreSQL – Change Default Encoding of New Databases To UTF-8 (Optional) Journal
- [GENERAL] ROLLBACK in a function - Google Groups
- [PostgreSQL-Hackers] DOMAINs and CASTs - Grokbase
- page's description: (33 replies) Hi, If i create a DOMAIN an then want to create a CAST from that domain to another type it gives an error. Consider this example: """ create domain datetime as timestamp with time zone check (value between '1753-01-01 00:00:00' and '9999-12-31 23:59:59'); create function datetime2int(datetime) returns int language sql stable strict as $$ select $1::date - '1753-01-01'::date; $$; create cast(datetime as int) with function datetime2int(datetime); """ if i try to cast, get this error: select
- [SOLVED] PostgreSQL Can't Rename Table Constraints
- page's description: ' I had to rename a table yesterday due to a contact / group name change in the office and sadly I'm the only person who knows how to barely interact
- /hw/hw1/student/Hw1/postgresql-8.0.3/src/backend/access/transam/xact.c – cs186 – Trac
- #1018728: postgres NAMEDATALEN limitation create problems | drupal.org
- Constraint name update in PostgreSQL - Stack Overflow
- database - how to emulate "insert ignore" and "on duplicate key update" (sql merge) with postgresql? - Stack Overflow
- How can I change 'shmmax'
- page's description: I have installed Oracle 9i on RedHat 9.
Current value of 'shmmax' is 33554432.
Some people recommend value of appr. 50% of the RAM.
I tried to change the value of 'shmmax' in two ways:
1. cat 268435456 > /proc/sys/kernel/shmmax
2. sysctl -w kernel.shmmax=268435456
- How Do I Enable remote access to PostgreSQL database server?
- page's description: A step by step guide for enabling remote access to your PostgreSQL database server under Linux or UNIX operating system so that client can connect server remotely.
- How to edit system catalogs in PostgreSQL 8.1? - Server Fault
- ilines -- universal newlines from any data source « Python recipes « ActiveState Code
- logging - Where postgresql logs are on mac os x? - Stack Overflow
- Maximum columns problem - dBforums
- page's description: Hi all, I have roughly 30,000 objects (tissue samples) for which I would like to store 1500 attributes for each sample. Each attribute is a numerical
- MLA Wire: Postgresql: Indexes on Foreign Keys
- MySQL and Postgres command equivalents (mysql vs psql) | End Point Blog
- page's description: End Point developers blog about ecommerce, databases, PostgreSQL, MySQL, Interchange, Ruby on Rails, Spree, Django, PHP, Android, hosting, Git, version control, Perl, Python, Java, and SEO.
- Omega Glory - PostgreSQL Slow Count Workaround
- pgAdmin Options - Tab 3 (Query)
- page's description: pgAdmin is the leading graphical Open Source management, development and administration tool for PostgreSQL, running on Windows, Linux, Solaris, FreeBSD and Mac OSX
- phpPgAdmin - Wikipedia, the free encyclopedia
- Postgres Session Variables – Neat. | An Oak In The Fall
- page's description: Postgres Session Variables – Neat.
- Postgresql - concat_ws like function? - Stack Overflow
- postgresql - Hash a column in postgres using sha-256 - Stack Overflow
- PostgreSQL - How to Create User-Defined Type (UDT) - SQLines
- page's description: You can create a user-defined type using CREATE DOMAIN and CREATE TYPE statements. Quick Example: -- Define a type using CREATE DOMAIN CREATE DOMAIN addr VARCHAR(90) NOT NULL DEFAULT 'N/A'; -- Define a type using CREATE TYPE CREATE TYPE address AS (city VARCHAR(90), street VARCHAR(90)); -- Use them in a table CREATE TABLE location (ship_address addr, full_address address);
- postgresql - How to include files relative to the current executing script in psql? - Stack Overflow
- postgresql - Putting EXPLAIN results into a table? - Stack Overflow
- PostgreSQL - sql - foreign key on pg_shadow
- page's description: foreign key on pg_shadow. Dear list, Upon designing our application we thought that the following setup would be a good idea to implement security: Using the pg_shadow table as it is: |...
- PostgreSQL and bloat
- page's description: /dev/dim
- PostgreSQL on Mac OS X
- PostgreSQL services Mac OS X Lion start/stop | blog.hersoncruz.com
- postgresql, DROP FUNCTION without knowing the number/type of parameters? - Stack Overflow
- PostgreSQL: assigning ROWNUM (row number) to each returned row | EXPLAIN EXTENDED
- page's description: How to create fast database queries
- pqc - PostgreSQL Query Cache - Google Project Hosting
- psql -f COPY from STDIN - Grokbase
- page's description: (5 replies) The following command works fine when pasing it to psql via the -c option: cat event.csv | \ psql -c "COPY (event_id, event_name) FROM STDIN DELIMITER AS ',' NULL AS ''" When executed from a file via -f, it does nothing (no error messages either): event.sql: COPY (event_id, event_name) FROM STDIN DELIMITER AS ',' NULL AS '' cat event.csv | psql -f event.sql What's the problem? Many thanks in advance. -- Best Regards, Tarlika Elisabeth Schmitz
- Psycopg
- Re: 1600 column limit per table
- Re: generic options for explain
- Re: Restoring right side of the display
- security - How can I hash passwords in postgresql? - Stack Overflow
- select * from depesz; » Blog Archive » Should you use HASH index?
- select * from depesz; » Blog Archive » Waiting for 8.4 – hash based DISTINCT
- SourceForge.net: phpPgAdmin: Detail: 3072065 - "Auto login" doesn't work
- page's description: phpPgAdmin is a fully functional web-based administration utility for a PostgreSQL database server. It handles all the basic functionality as well as some advanced features such as triggers, views and functions (stored procs)
- sql - Foreign key to a pg_catalog table in PostgreSQL - Stack Overflow
- sql - PostgreSQL HASH index - Stack Overflow
- "It should be noted that as of version 8.4 the issue with Hash indexes being less efficient and slower than b-tree indexes is resolved"
- sql - What is the maximum number of columns in a PostgreSQL select query - Stack Overflow
- String Functions and Operators Compatibility - PostgreSQL wiki
- GUI Database Design Tools - PostgreSQL wiki
- Implementation Limits For SQLite
- sql - How can you represent inheritance in a database? - Stack Overflow
- xkcd • View topic - Inheritance in SQL
- page's description: also "One table per class with type field: Same as above, with a column in the parent class table indicating the sub-class."
"Or... use Postgres
http://www.postgresql.org/docs/8.1/stat ... herit.html"
- xpath to sql translation
- page's description: Are there any tools (java classes, tag libraries) which can translate xpath statements into a SQL query? Given an xpath query which has a predicate that filters node values or
"I've never seen an Xpath to SELECT [] FROM [] WHERE clause translation.
And it is not easy to do that,
because you have to have rules in how you store xml in a relational database.
I think that's also the reason there are no tools to do that."
"
We have found a couple of products on IBM's Alphaworks site. One of
them uses the "DB2 XML Extenders" mapping of XML<=>SQL. The other
seems to create a default mapping based on SQL metadata.
Both of them are limited to Linux & Windows. While we may use these,
our main RDB is DB2 for ISeries. So we are still checking.
If you are curious, the links are:
http://www.alphaworks.ibm.com/tech/xtable
http://www.alphaworks.ibm.com/tech/db2uriaccess
"
- http://publib.boulder.ibm.com/infocenter/iadthelp/v7r0/index.jsp?topic=/com.ibm.etools.logging.ui.doc.user/ref/rmapping_XPath_SQL.html
git
- A Gaggle Of Git Tips | Viget
- "I use git rebase -i to make sure every commit is clean. For example, when I have two commits with broken code followed by a third clean commit"
- Effectively Using Git With Subversion | Viget
- Emmanuel Bernard: How to install Git and git-svn on Mac OS X
LDAP
- LDAPv3 Distinguished Names
- Appendix E: LDAP core.schema
Mac
sleep
wake for network access
- Wake a sleeping Mac from the network - Mac OS X Hints
- About Wake on Demand
- page's description: <p>The Wake on Demand feature of Mac OS X v10.6 or later, lets your Mac continue to share items (such as music, printers, files, or your screen) when it is asleep.</p>
- Access Your Computer Anytime and Save Energy with Wake-on-LAN
- page's description: You want access to your home computer wherever you are, whatever you're doing, whether that's via a remote desktop connection, SSH, FTP, web interface, or any other remote access you've set up. The catch is, you don't like throwing money away to an always-on system. Luckily you can have your digital cake and eat it, too, and today I'll show you how to boot and shut down your system remotely so that it's ready for you when you need it and it's not wasting energy when you don't.
- Indicator of iMac sleep status - Mac OS X Hints
- pmset(1) Mac OS X Manual Page
- SmartSleep
- Why hibernate or 'safe sleep' mode is no longer necessary in OS X Lion (Updated) | TUAW - The Unofficial Apple Weblog
- page's description: Update: Several commenters expressed concern that disabling safe sleep could expose you to the possibility of drive corruption if you lose power or
- Dan Bishop » How to mount SFTP/SSH shares in OS X NOW UPDATED to include OS X 10.8
- firewall blocks ssh since Sept 12 update: Apple Support Communities
- OS X: How to reset the DNS cache
- page's description: <p>Learn how to reset (flush) the DNS cache. </p>
- osx - List all members of a group (Mac OS X) - Super User
- Prevent .DS_Store file creation on network volumes - Mac OS X Hints
- Time Machine: How to transfer backups from the current backup drive to a new backup drive
- page's description: <p>If you want to switch to a different TIme Machine backup drive, use this article to learn how to transfer your existing Time Machine backups to the new backup drive, and then use it for regular Time Machine backups.</p>
Python
parallel
- Documentation for processing-0.50
- ParallelProcessing - PythonInfo Wiki
- 16.2. threading — Higher-level threading interface — Python v2.7.3 documentation
- Parallel Python - Home
- page's description: Parallel Python
- 19.6. xml.dom — The Document Object Model API — Python v2.7.2 documentation
- 20.6. urllib2 — extensible library for opening URLs — Python v2.7.2 documentation
- 26.4. The Python Profilers — Python v2.7.2 documentation
- 27.6. warnings — Warning control — Python v2.7.2 documentation
- 3. Data model — Python v2.7.3 documentation
- 3.4.1 Basic customization
- 3.6.2 String Formatting Operations
- 5. Built-in Types — Python v2.7.3 documentation
- 5. Expressions — Python v2.7.2 documentation
- 7.2. re — Regular expression operations — Python v2.7.2 documentation
- 9.7. itertools — Functions creating iterators for efficient looping — Python v2.7.2 documentation
- Differences between CPython and Jython
- Django | GeoDjango | Django documentation
- page's description: Django is a high-level Python Web framework that encourages rapid development and clean, pragmatic design.
- MySQLdb User's Guide
- Overview — Python v2.7.2 documentation
- PEP 0263 -- Defining Python Source Code Encodings
- page's description: None
- Psycopg
- Python Exception Handling Techniques - Doug Hellmann
- urllib2 - The Missing Manual
- page's description: Website of Michael Foord. Python programming articles, projects and technical blog.
- PEP 3132 -- Extended Iterable Unpacking
- page's description: None
- psycopg2.extensions.querycancelederror: copy from stdin failed: error in .read() call - Google Search
- 13.1. csv — CSV File Reading and Writing — Python v2.7.3 documentation
- compiled Jython vs. CPython | Python | Python
- page's description: compiled Jython vs. CPython Python Python
"the benchmarks comparing Jython+JIT to CPython
are mostly in favour of CPython"
"An advantage of jython is that it profits from
speedups of the JVM's. Since Java is more widespread
than CPython, there is in general more interest in
speeding up JVM's than in speeding up the CPython
byte code interpreter."
- Issue 1519638: Unmatched Group issue - workaround - Python tracker
svn
- Executable Files in SVN
- Apache Subversion FAQ
Unix
bash
- bash - How to determine function name from inside a function - Stack Overflow
- bash - How to run an alias in a shell script? - Ask Ubuntu
- Bash Reference Manual
- page's description: Bash Reference Manual
- Detaching processes from the current bash session | Sébastien Wains
- How to reverse array in bash onliner FOR loop? - Stack Overflow
- How do I rename a bash function? - Stack Overflow
- Mivok.net - Bash function renaming and overriding
- Is there any mechanism in Shell script alike "include guard" in C++? - Stack Overflow
- Bash Associative Arrays | Linux Journal
- page's description: The bash man page has long had the following bug listed: "It's too big and too slow" (at the very bottom of the man page). If you agree with that, then you probably won't want to read about the "new" associative arrays that were added in version 4.0 of bash.
gnome-keyring
- linux - store svn password in gnome-keyring - Super User
- ubuntu - use of gnome-keyring-daemon without X - Super User
- GNOME Keyring - ArchWiki
- GNOME Keyring Tool
- Kenneth Holter » Using Svn client and Gnome keyring in SSH sessions
- page's description: Subversion client software have traditionally stored (i.e. cached) plaintext user passwords, meaning that you password is accessible by anyone who can access files in your ~/.subversion/auth folder. With Subversion 1.6,
make
- GNU `make'
- page's description: GNU `make'
- Override target in makefile to add more commands? - Stack Overflow
- [ubuntu] On login 5 packages can be updated - Ubuntu Forums
- page's description: [ubuntu] On login 5 packages can be updated Server Platforms
- BREs Regular Expressions
- Command to wait for a process (not a child process) - Ubuntu Forums
- page's description: Command to wait for a process (not a child process) Programming Talk
- du question: sort by size & show human-readable sizes - Ubuntu Forums
- page's description: du question: sort by size & show human-readable sizes Programming Talk
- Fink - Source Release Download
- page's description: The Fink Team wants to bring the full world of Unix Open Source software to Darwin and Mac OS X. We modify Unix software so that it compiles and runs on Mac OS X and make it available for download as a coherent distribution
- GNU `ed' Manual
- page's description: GNU `ed' Manual
- How to Convert Uppercase to Lowercase With SED | eHow.com
- page's description: How to Convert Uppercase to Lowercase With SED. Stream editor, or sed, is a powerful Linux program that you can use to programmatically perform regular edits upon batches of text files. One example of a systematic edit that sed is well-suited for is converting all the letters in a batch of text files from uppercase to lowercase.
- Install htop on Mac OS X - opinion, technology, culture, politics - themainframe.ca
- Killing zombie process
- liblockfile 1.08, lockfile_8h.html
- linux - How to clear the scrollback in the screen command? - Stack Overflow
- lockfile_create(3): manage lockfiles - Linux man page
- page's description: The lockfile_create function creates a lockfile in an NFS safe way.
- Nice Value of a Process
- page's description: Hi, All, What is the command to display the nice value of a process? Thanks, August
- Quick Look Helper process eating virtual memory on Mac - Operating Systems
- page's description: Quick Look Helper process eating virtual memory on Mac, Operating Systems, Computer end-user technical support troubleshooting for Windows, Mac, and Linux. Operating system tips and tweaks as well..
- Rsync include/exclude quirks
- page's description: Issues with rsync's include and exclude options
- screen - The Terminal Multiplexer
- text processing - Multiline pattern match using sed, awk or grep - Unix and Linux
- What is Umask and How To Setup Default umask Under Linux?
- page's description: Explains how to read and setup umask (he file mode creation mask of the current process) for file under Linux operating systems using bash shell.
- What is used to create the shadow password hash??
- page's description: Hello, When you create a new user thats able to login etc etc, you also create there password for them, this obviously works with the users password
- Xterm Control Sequences
- Linux: Delete user password
- Access Shared Folders in a VirtualBox Ubuntu 11.04 Virtual Machine
- page's description: Have you installed Ubuntu 11.04 as a virtual machine in VirtualBox but have had problems getting the Shared Folders feature to work? We were able to add a shared folder, but were unable to access it.
- uutils - Unix utilities - Google Project Hosting
- uutils - Revision 126: /trunk
- Revision Control System - Wikipedia, the free encyclopedia
- Concurrent Versions System - Wikipedia, the free encyclopedia
web
Apache
2.4
- [ubuntu] Apache 2.4 is ready for you!
- page's description: ! Please move thread to Server Platforms ! (my mistake)
The latest stable apache web server 2.4.2 is available for both 12.04 LTS and Quantal Quetzal ! Test away! Current apache 2.2 users please backup your stuff beforehand!
apt-add-repository ppa:ptn107/apache
apt-get update
apt-get install apache2
https://launchpad.net/~ptn107/+archive/apache
- Alias 403 Forbidden with Apache - Stack Overflow
- Expressions in Apache HTTP Server - Apache HTTP Server
- Question #224526 : Questions : Ubuntu
- page's description: As company compliance to Requirement 10 of PCI DSS, I recently installed a File Integrity Monitoring system using OSSEC HIDSi and it's been up and running. We are also required to conduct internal vulnerability scan with our network to comply with Requirement 11 and so I used Nexpose Rapid7. After scanning, report says that Linux server running OSSEC is vulnerable through its outdated Apache server (version 2.22) and suggest to upgrade it to version 2.4. Apache server is required for the OSSE...
- Upgrading to 2.4 from 2.2 - Apache HTTP Server
- Advanced Techniques with mod_rewrite - Apache HTTP Server
- Apache
- Apache Core Features ErrorDocument directive
- Apache vs Lighttpd - WikiVS
- "In Lighttpd you're restricted to rewriting via the config level only, which means for things like Wordpress you will need to hard code the rewrite rule in."
- apache2 - enabling and disabling sites - Apache - Snipplr Social Snippet Repository
- page's description: enable and disable sites and modules in apache 2
- Beefed Up mod_autoindex Listings « My Ride Home
- Bug 31210 – Problematic competition between mod_rewrite and mod_dir
- "
> /* if someone used the PASSTHROUGH flag in per-dir
> * context we just ignore it. It is only useful
> * in per-server context
> */
"
- Bug 38642 – mod_rewrite adds path info postfix after a substitution occured
- Crazy Advanced Mod_Rewrite Debug Tutorial
- page's description: Crazy Advanced Mod_Rewrite Debug Tutorial
- How can I check which version of apache is installed on a Debian machine? - Stack Overflow
- htpasswd - Manage user files for basic authentication - Apache HTTP Server
- "The SHA encryption format does not use salting"
- mod rewrite - .htaccess RewriteRule - DOCUMENT_ROOT and RewriteBase - Stack Overflow
- mod_alias - Apache HTTP Server
- mod_autoindex - Apache HTTP Server
- RewriteRule Flags - Apache HTTP Server
CSS
- CSS white-space property
- page's description: Free HTML CSS JavaScript DOM jQuery XML AJAX RSS ASP .NET PHP SQL tutorials, references, examples for web building.
domains
AdamsNames
- IMPORTANT - AdamsNames Changes
- Breaking: Registry Operator AdamsNames Hacked Locking Up .TC, .GD & .VC
- page's description: According to a press release we just received by* KSregistry GmbH, which is owned by Key-Systems GmbH, “a third party has executed a transfer of the domain name adamsnames.net and now operates a shadow registry under this domain”.
Adams Names is the Registry for the ccTLD’s of .TC, .GD and .VG and uses KSregistry as its back end to operate the registries.
“According to the CEO of AdamsNames Ltd., Mr. Carsten Pauli, this transfer was not authorized by the registry operator”.
“KSregistry
- IMPORTANT - AdamsNames Changes (.TC - .GD - .VG) | Hexonet
DNS
- Network Tools: DNS,IP,Email
- page's description: DNS and Network troubleshooting and diagnostic tools integrated into one sweet interface.
- Traceroute, Ping, Domain Name Server (DNS) Lookup, WHOIS
- Deploying DNSSEC | ICANN
- DNS: DNAME is useless - davidb dives in
- page's description: DNAME, if you are not aware, is a DNS record type defined in
RFC 2672. If you are
familiar with the DNS’s CNAME record, then think of DNAME as …
- BIND - Wikipedia, the free encyclopedia
- BIND 9's New Resource Records | DNAME, Domain Alias | InformIT
- page's description: DNS's new version of BIND, BIND 9, implements two new Resource Records to help you take DNS to an advanced level. Learn about them quickly in this article.
TLDs
- GTLD – Trusted Information on Generic Top Level Domains – Verisign
- page's description: Verisign brings extensive gTLD expertise. We provide premium consulting and technical services to help you apply for, manage, and monetize your new gTLD.
- List of Internet top-level domains - Wikipedia, the free encyclopedia
- When will the new gTLDs be released? : Marcaria.com Support
- page's description: When will the new gTLDs be released?. New gTLDs. Domain Names
- New TLD List 2012 - New Top Level Domains - New TLDs 2012
- page's description: Comprehensive list of the new Top Level Domains (TLD's) for the New TLD program from ICANN in 2012.
- Free Website Uptime Monitoring - Uptime Robot
- Linux Basics - Set A Static IP On Ubuntu | HowtoForge - Linux Howtos and Tutorials
- page's description: Linux Basics - Set A Static IP On Ubuntu
- subdomain - what are the allowed characters in a sub-domain - Stack Overflow
- 10 Free Services to Monitor Your Site's Uptime
- page's description: This series is supported by Rackspace, the better way to do hosting. Learn more about Rackspace's hosting solutions here. You can't sit staring at your monitor 24 hours a day to...
- Three Letter Domain names
- page's description: 3 letter domain names
- .ORG Registrars | .ORG, The Public Interest Registry| Buy, Sell, Register .ORG Domain Names
FastCGI
- Integrating FastCGI with Java
- Apache module mod_fastcgi
Roundcube
change password
- #1483886 (Roundcube doesn't work when password contains escape character "\") – Roundcube Webmail
- roundcubemail/plugins/password at master · roundcube/roundcubemail · GitHub
- page's description: The Roundcube Webmail suite. Contribute to roundcubemail development by creating an account on GitHub.
- roundcubemail/plugins/password/config.inc.php.dist at master · roundcube/roundcubemail · GitHub
- page's description: The Roundcube Webmail suite. Contribute to roundcubemail development by creating an account on GitHub.
- Backslash Character in IMAP Password? - Chilkat Q&A Forum
- page's description: I do have a question though as a user is experiencing a bug: their password has a backslash in it and the library is not able to connect to the IMAP server because the string is not properly escaped. Is there a best practice for this?
- 28941 – backslash and Double Quote " not escaped for IMAP username Login
- roundcubemail/plugins/password/drivers at master · roundcube/roundcubemail · GitHub
- page's description: The Roundcube Webmail suite. Contribute to roundcubemail development by creating an account on GitHub.
- roundcubemail/plugins/password/drivers/ldap_simple.php at master · roundcube/roundcubemail · GitHub
- page's description: The Roundcube Webmail suite. Contribute to roundcubemail development by creating an account on GitHub.
- roundcubemail/plugins/password/drivers/chpasswd.php at master · roundcube/roundcubemail · GitHub
- page's description: The Roundcube Webmail suite. Contribute to roundcubemail development by creating an account on GitHub.
- rcube_utils.php in subversion/trunk/roundcubemail/program/include – Roundcube Webmail
URLs
- What Every Developer Should Know About URLs
- page's description: I have recently written about the value of fundamentals in software development. I am still firmly of the opinion that you need to have your fundamentals down
- PURL Home Page
- bitly
wikis
Redmine
- Redmine - How to make wiki public - Redmine
- page's description: Redmine
- Redmine - RedmineTextFormatting - Redmine
- page's description: Redmine
- RedmineWikiFormatting
- Anchors in wiki pages - Redmine
- page's description: Redmine
- Using anchors in redmine - Alexey Bokov’s weblog » Blog Archive » Redmine as corporate wikipedia
- Feature #4482: Cache textile rendering - Redmine
- page's description: Redmine
- Introducing the Redmine Google Docs Plugin | Evolving Web
TWiki
- ForceNewRevisionCheckBox < Codev < TWiki
- Is there a way to list all the child topics in a parent topic < Support < TWiki
- ProgrammingSearchesInTWiki < Main < TWiki
- TextFormattingRules < TWiki < TWiki
- TreePlugin < TWiki < TWiki
- TWiki on Ubuntu 10.04 (Lucid) – Linode Library
- page's description: Install and configure a structured wiki with TWiki.
- TWikiDocumentation < TWiki < TWiki
- TWikiOnUbuntu < Codev < TWiki
- TWikiPreferences < TWiki < TWiki
- TWikiVariables < TWiki < TWiki
- BlackListPlugin < Plugins < TWiki
- Confluence Licensing | Atlassian
- Pricing | Atlassian Confluence
- page's description: Confluence pricing starts at $10 for 10 users and scales with your growing business, from startup to enterprise. Download Confluence or try hosted.
- Convert HTML to XHTML
- page's description: Online HTML to XHTML converter tool, copy and paste your HTML source code into the box below.
- Data URI scheme - Wikipedia, the free encyclopedia
- How to Block Certain Sites in Google Search Results without Extensions | Web Talk
- page's description: Google users are accustomed to modify the Google official home page with a lot of extensions able to modify the design of the Google search engine page as
- How to change Tomcat default port ?
- html - Making an svg image object clickable with onclick, avoiding absolute positioning - Stack Overflow
- URL Decoder/Encoder
- weird square favicon | Firefox Support Forum | Mozilla Support
- Bug #788256 “inkscape cannot dock toolbars” : Bugs : “inkscape” package : Ubuntu
- page's description: Binary package hint: inkscape
I installed Inkscape for the first time on Ubuntu 11.04 and I see that the main toolbar and the toolbar for sticking lines and segments where on the right side (later noticed the "wide" and "standard" views).
1) I tried to move the main toolbar and it worked like expected in vertical mode. I could however not dock the toolbar on top, horizontally.
2) When I tried to move the other toolbar it would not dock anywhere, not even where it was at the beginning.
Pro...
- Compatibility - Microsoft Access 2000 - CodeWeavers
- Converting UTF8 to Latin1
- Creating Hyperlinks in Adobe Acrobat « Acrobat for Legal Professionals
- page's description: The Acrolaw Blog is a resource for lawyers, law firms, paralegals, legal IT pros and anyone interested in the use of Acrobat in the legal community. Rick Borstein– the author of the blog– is the Business Development Manager for Acrobat in the Legal Market for Adobe Systems.
- English to French, Italian, German & Spanish Dictionary - WordReference.com
- page's description: Free online Oxford dictionaries - Spanish, French, Italian, German and more. Conjugations, audio pronunciations and forums for your questions.
- Hamming distance - Wikipedia, the free encyclopedia
- How To Create An Image Map Using GIMP
- page's description: Have you ever wanted to add an image map to your web site? An image map is a graphic that contains hotspots that link to URLs. They are used as a means t
- java - What is a regex "independent capturing group"? - Stack Overflow
- Password Strength Test
- PHP: $_SERVER - Manual
- Safari Books Online - Home
- utf8-decoder
- virtualbox.org • View topic - Shared folder permissions
- WARNING: <file> failed verification -- update discarded (will try again).
- XSLT Tutorial
- page's description: Free HTML XHTML CSS JavaScript jQuery XML DOM XSL XSLT RSS AJAX ASP .NET PHP SQL tutorials, references, examples for web building.
- cryptography - Is SHA1 better than md5 only because it generates a hash of 160 bits? - IT Security Stack Exchange
vegetation data
DiGIR
- DiGIR - Table of Contents
- DiGIR web-browser client helper scripts.
- GBIF Data Access and Database Interoperability
- http://splink.cria.org.br/digir/
- http://www.digir.net/prot/release/searchRequestDiGIR1.5.xml
- search.vm - gbif-occurrencestore - Research into a scalable and feature-rich occurrence store and index - Google Project Hosting
- DiGIR Messaging
- Biodiversity Collections Index
- simple-digir/SimpleDigir.php at master · diogok/simple-digir · GitHub
- page's description: simple-digir - Tool (class and UI) to simplify search on DIGIR server
- BCI: Search:
- BCI: Search: digir
TAPIR
- TAPIR metadata
VegBank
- reinstalling VegBank on VegBankVM
- VegBank
- VegBank Data Dictionary: Menu
- vegbank repository
- VegBank XML
- vegbank_erd.pdf
- VegBranch tools : Normalizer
- Atlas of Living Australia
- page's description: The Atlas of Living Australia provides tools to enable users of biodiversity information to find, access, combine and visualise data on Australian plants and animals
- Atmosphere
- Bien-db Info Page
- Canadensys IPT
- Darwin Core
- Dashboard - iPlant Collaborative Wiki
- DwC hist
- FIA DataMart 5.1 :: Home
- Home - iPToL - iPlant Collaborative Wiki
- Home - Taxonomy - NCBI
- Index Herbariorum :: NYBG.org
- iTOL: Interactive Tree Of Life
- Jellyfish Blooms of the Global Ocean: Magnitude, Causes and Consequences for Marine Food Webs, Carbon Cycling and Socioeconomics | NCEAS
- Mission — TraitNet
- Norms for data use and publication – Canadensys
- RAINFOR
- Smithsonian Tropical Research Institute-Center for Tropical Forest Science
- Sources
- speciesLink: networkManager
- Taxon - darwincore - Darwin Core Project site for discussion and development - Google Project Hosting
- Taxonomic Name Resolution Service - Home
- Taxonomic Name Resolution Service - Instructions
- Taxonomic Name Resolution Service - Instructions
- Taxonomy - Site Guide - NCBI
- TDWG: Taxonomic Concept Transfer Schema
- The National Vegetation Survey Databank (NVS)
- Tropicos - Home
- Veg-X
- Turboveg for Windows
- Web Services - Tropicos
- What is SALVIAS?
- What is the NVS Databank?
- Biodiversity Collections Index
- Index of ftp://ftp.gbif.org/
- Taxonomic Name Resolution Service - API
- Google
- Google Calendar
- remember password
- Recent Tags
- Recently Bookmarked