root/scripts/util/test_map @ 88
| 1 | 53 | aaronmk | #!/bin/bash
|
|---|---|---|---|
| 2 | # Tests map
|
||
| 3 | # Usage: [env n=<num-rows>] self
|
||
| 4 | |||
| 5 | selfDir="$(dirname -- "$0")" |
||
| 6 | cd "$selfDir" |
||
| 7 | |||
| 8 | test -n "$n" || n=2 |
||
| 9 | let n++
|
||
| 10 | |||
| 11 | 88 | aaronmk | in=NYSpecimenDataAmericas.csv |
| 12 | out=NYSpecimenDataAmericas.xml |
||
| 13 | 53 | aaronmk | |
| 14 | 88 | aaronmk | head -"$n" "$in"|../map ../../mappings/NYBG-VegX.organisms.csv \ |
| 15 | >"test_output/$out" && diff "$out" "test_output/$out" |
||
| 16 | |||
| 17 | head -"$n" "$in"|../map2vegbank ../../mappings/joins/NYBG-VegBank.organisms.csv |