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1
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#!/bin/bash -e
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2
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# links to locally-available resources
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3
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. "$(dirname "${BASH_SOURCE[0]}")"/util.sh
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4
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5
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if self_not_included; then
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6
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7
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root_dir="$(dirname "${BASH_SOURCE[0]}")"/..
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bin_dir="$root_dir"/bin
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bin_dir_abs="$(realpath "$bin_dir")"
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10
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export PATH="$bin_dir_abs:$PATH"
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12
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13
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#### make
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14
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root_make () { echo_func; extern make --directory="$root_dir" "$@"; }
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16
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#### connection vars
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18
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: "${remote_server=vegbiendev.nceas.ucsb.edu}"
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: "${local_server=localhost}"
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: "${local_user=bien}"
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: "${local_password="$(cat "$root_dir"/config/bien_password)"}"
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23
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#### databases
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25
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26
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### MySQL
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27
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: "${postgres_compat=1}"
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29
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30
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mysql ()
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{
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32
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echo_func
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echo_run mysql_bien --database="$schema" --verbose "$@"
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}
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35
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36
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mysqldump_local ()
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37
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{
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38
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echo_func
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39
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use_local_remote; mysqldump_diffable "$@"
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40
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}
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41
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42
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### PostgreSQL
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43
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44
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psql () # usage: [file=...] [dir=...] self
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45
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{
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46
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echo_func
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47
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if test -n "$file"; then
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48
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set -- --file "$file" "$@"
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49
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local dir="${dir:-$(dirname "$file")}"
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50
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fi
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local dir="${dir:-$top_dir}"
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52
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local psql_cmd="psql_$(if log_sql; then echo verbose; else echo script; fi)_vegbien"
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54
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(cat <<EOF
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\cd $dir
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56
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\set schema "$schema"
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\set table "$table"
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58
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\set table_str '''"$table"'''
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59
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SET search_path TO "$schema", util;
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60
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EOF
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61
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cat)|
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62
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env no_search_path=1 "$psql_cmd" --output /dev/fd/4 "$@" 4>&1 >&2
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63
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}
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64
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65
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fi
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