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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 7564 almost 12 years Aaron Marcuse-Kubitza lib/common.Makefile: remote server: Use jupiter...
  bin 8943 over 11 years Aaron Marcuse-Kubitza bin/my2pg: support $sql_ascii mode, where varbi...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 8798 over 11 years Aaron Marcuse-Kubitza exports/: svn:ignore *.csv
  inputs 9155 over 11 years Aaron Marcuse-Kubitza inputs/GBIF/raw_occurrence_record/run: override...
  lib 9153 over 11 years Aaron Marcuse-Kubitza lib/sh/local.sh: added mysql_export_local()
  mappings 8235 over 11 years Aaron Marcuse-Kubitza mappings/VegCore.htm: Renamed salvias_plots tab...
  planning 8457 over 11 years Aaron Marcuse-Kubitza Moved validation/ under planning/workflow/
  schemas 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
  web 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
Makefile 12.6 KB 8844 over 11 years Aaron Marcuse-Kubitza bugfix: /Makefile: moved schemas/install from i...
README.TXT 21 KB 8945 over 11 years Aaron Marcuse-Kubitza /README.TXT: Maintenance: to synchronize vegbie...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 450 Bytes 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
9155 05/11/2013 12:07 PM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record/run: override table.tsv/make() instead of export_mysql()
9154 05/11/2013 12:06 PM Aaron Marcuse-Kubitza

inputs/GBIF/table.run: table.tsv/make(): use new mysql_export_local instead of ./MySQL_export
9153 05/11/2013 12:05 PM Aaron Marcuse-Kubitza

lib/sh/local.sh: added mysql_export_local()
9152 05/11/2013 12:05 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: added mysql_export(). documented that mysql_export_outfile() supports CSV, but requires the FILE privilege.
9151 05/11/2013 12:02 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: mysql(): use --column-names to ensure the output is formatted appropriately. note that --column-names is the default, but better to specify it to be sure.
9150 05/11/2013 12:01 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: mysql(): output_data mode: use --batch to ensure the output is formatted appropriately. note that --batch is the default when stdin is from a pipe, but better to specify it to be sure.
9149 05/11/2013 11:49 AM Aaron Marcuse-Kubitza

*{.sh,run}: use new limit_stdout_cmd instead of `stdout2stderr=1 limit_stderr_cmd`
9148 05/11/2013 11:40 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: added limit_stdout_cmd alias
9147 05/11/2013 07:25 AM Aaron Marcuse-Kubitza

lib/sh/make.sh: added $rm short var for $remake
9146 05/11/2013 07:22 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: verbosity: removed `declare -i verbosity` because this does not actually ensure that $verbosity is an integer; it only has "arithmetic evaluation [...] done when the variable is assigned to" (`help declare`)

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