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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 7564 almost 12 years Aaron Marcuse-Kubitza lib/common.Makefile: remote server: Use jupiter...
  bin 8943 over 11 years Aaron Marcuse-Kubitza bin/my2pg: support $sql_ascii mode, where varbi...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 8798 over 11 years Aaron Marcuse-Kubitza exports/: svn:ignore *.csv
  inputs 9156 over 11 years Aaron Marcuse-Kubitza removed no longer used inputs/GBIF/MySQL_export...
  lib 9159 over 11 years Aaron Marcuse-Kubitza lib/sh/util.sh: .(): use echo_run so that inclu...
  mappings 8235 over 11 years Aaron Marcuse-Kubitza mappings/VegCore.htm: Renamed salvias_plots tab...
  planning 8457 over 11 years Aaron Marcuse-Kubitza Moved validation/ under planning/workflow/
  schemas 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
  web 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
Makefile 12.6 KB 8844 over 11 years Aaron Marcuse-Kubitza bugfix: /Makefile: moved schemas/install from i...
README.TXT 21 KB 8945 over 11 years Aaron Marcuse-Kubitza /README.TXT: Maintenance: to synchronize vegbie...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 450 Bytes 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
9159 05/11/2013 12:23 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: .(): use echo_run so that included files are echoed as they are included. note that echo_run uses cmd_indent, so the included files' load-time logging output will be indented according to the nesting level of the include.
9158 05/11/2013 12:20 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: moved .() command echoing > internal commands section
9157 05/11/2013 12:19 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: moved echo_run() to general command echoing section because it can also be used for internal commands
9156 05/11/2013 12:09 PM Aaron Marcuse-Kubitza

removed no longer used inputs/GBIF/MySQL_export. use lib/sh/local.sh mysql_export_local() instead.
9155 05/11/2013 12:07 PM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record/run: override table.tsv/make() instead of export_mysql()
9154 05/11/2013 12:06 PM Aaron Marcuse-Kubitza

inputs/GBIF/table.run: table.tsv/make(): use new mysql_export_local instead of ./MySQL_export
9153 05/11/2013 12:05 PM Aaron Marcuse-Kubitza

lib/sh/local.sh: added mysql_export_local()
9152 05/11/2013 12:05 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: added mysql_export(). documented that mysql_export_outfile() supports CSV, but requires the FILE privilege.
9151 05/11/2013 12:02 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: mysql(): use --column-names to ensure the output is formatted appropriately. note that --column-names is the default, but better to specify it to be sure.
9150 05/11/2013 12:01 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: mysql(): output_data mode: use --batch to ensure the output is formatted appropriately. note that --batch is the default when stdin is from a pipe, but better to specify it to be sure.

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