root/scripts/util/test_map @ 92
| 1 | 53 | aaronmk | #!/bin/bash
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| 2 | # Tests map
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| 3 | # Usage: [env n=<num-rows>] self
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| 4 | |||
| 5 | selfDir="$(dirname -- "$0")" |
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| 6 | cd "$selfDir" |
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| 7 | |||
| 8 | test -n "$n" || n=2 |
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| 9 | let n++
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| 10 | |||
| 11 | 88 | aaronmk | in=NYSpecimenDataAmericas.csv |
| 12 | out=NYSpecimenDataAmericas.xml |
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| 13 | 53 | aaronmk | |
| 14 | 88 | aaronmk | head -"$n" "$in"|../map ../../mappings/NYBG-VegX.organisms.csv \ |
| 15 | >"test_output/$out" && diff "$out" "test_output/$out" |
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| 16 | |||
| 17 | head -"$n" "$in"|../map2vegbank ../../mappings/joins/NYBG-VegBank.organisms.csv |