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Revision 920

DwC mappings: Mapped Substrate and Vegetation

View differences:

inputs/NYBG/maps/DwC.specimens.csv
52 52
"Notes","bien.specimenDescription/_merge/1",
53 53
"Habitat","habitat",
54 54
"PlantFungusDescription","bien.specimenDescription/_merge/2/_label[label=""plant fungus""]/value",
55
"Substrate",,
56
"Vegetation",,
55
"Substrate","bien.substrate",
56
"Vegetation","bien.vegetation",
57 57
"UniqueNYInternalRecordNumber","occurrenceID",
inputs/NYBG/maps/VegBIEN.specimens.csv
9 9
Longitude,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/reallongitude/_alt/2,,82
10 10
MaximumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
11 11
MinimumElevation,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
12
Vegetation,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,,
12 13
DayCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/day,,44
13 14
MonthCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/month,,44
14 15
YearCollected,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/year,,44
16
Substrate,/*_id/taxonoccurrence/*_id/locationevent/soilobs:[soilhorizon=unknown]/soildescription,,
15 17
MaximumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/max,,75
16 18
MinimumDepth,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/min,,74
17 19
Habitat,"/*_id/taxonoccurrence/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=habitat]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52
......
50 52
PreviousCatalogNumber,,?; Brad: OMIT,35
51 53
RelatedCatalogItem,,Brad: OMIT,161
52 54
RelationshipType,,Brad: OMIT,162
53
Substrate,,
54 55
TimeOfDay,,Brad: OMIT,45
55 56
TypeStatus,,Brad: OMIT (?). Indicates whether this specimen served as type for taxon name. Probably not relevant for BIEN,125
56
Vegetation,,
57 57
key,,
mappings/DwC-VegBIEN.specimens.csv
12 12
verbatimLongitude,/*_id/taxonoccurrence/*_id/locationevent/*_id/location/reallongitude/_alt/2,,82
13 13
maximumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/max,elevationrange/_range/to}",,72
14 14
minimumElevationInMeters,"/*_id/taxonoccurrence/*_id/locationevent/*_id/location/{elevation/_alt/2/_avg/min,elevationrange/_range/from}",,71
15
bien.vegetation,/*_id/taxonoccurrence/*_id/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,,
15 16
eventDate,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate,,44
16 17
eventDate/_alt/1/_*/date,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/1/_*/date,,44
17 18
eventDate/_alt/2/_date/day,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/day,,44
18 19
eventDate/_alt/2/_date/month,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/month,,44
19 20
eventDate/_alt/2/_date/year,/*_id/taxonoccurrence/*_id/locationevent/obsstartdate/_alt/2/_date/year,,44
21
bien.substrate,/*_id/taxonoccurrence/*_id/locationevent/soilobs:[soilhorizon=unknown]/soildescription,,
20 22
maximumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/max,,75
21 23
minimumDepthInMeters,/*_id/taxonoccurrence/*_id/locationevent/waterdepth/min,,74
22 24
habitat,"/*_id/taxonoccurrence/aggregateoccurrence/*_id/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=habitat]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?",52

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