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Revision 93

Started filling in required values for VegBank fields in mappings. Will need to refactor to move these to metadata for the datasources.

View differences:

mappings/VegX-VegBank.organisms.csv
1 1
"VegX:/*s/individualOrganismObservation","VegBank:/taxonObservation"
2
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Subspecies])/*_ID/*/plantName/epithet"
3
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/groupType","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=determinationType]]/definedValue"
4
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collector_ID->/party/givenName"
5
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collector_ID->/party/surName"
6
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Family])/*_ID/*/plantName"
7
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Genus])/*_ID/*/plantName"
8
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/AccordingTo/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/plantName/reference_ID->/referenceParty/{givenName,surname}"
9
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/*/plantName"
10
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Rank","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Subspecies])/*_ID/*/plantName/rank"
11
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/note","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=cfAff]]/definedValue"
12
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=cl])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Class])/*_ID/*/plantName"
13
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Family])/*_ID/*/plantName"
14
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Genus])/*_ID/*/plantName"
15
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ord])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Order])/*_ID/*/plantName"
16
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=phyl_div])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Subkingdom])/*_ID/*/plantName"
17
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=reg])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Kingdom])/*_ID/*/plantName"
18
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/AccordingTo/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/reference/referenceContributor/*_ID/referenceParty/{givenName,surname}"
19
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/*/plantName"
20
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ssp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Subspecies])/*_ID/*/plantName"
21
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonName)/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/*/plantName"
22
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/day","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/interpretationDate/_date/day"
23
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/month","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/interpretationDate/_date/month"
24
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/year","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/interpretationDate/_date/year"
25
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/partyWithRole[role=collector]/*ID->/parties/party/individualName/{givenName,surName}","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collector_ID/party/{givenName,middleName,surName}"
26
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/partyWithRole[role=identifier]/*ID->/parties/party/individualName/{givenName,surName}","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/*_ID/party/{givenName,middleName,surName}"
27
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/authorCode","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collectionNumber"
28
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/notes"
29
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/first","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/museum_ID/party/OrganizationName/_name/first"
30
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/last","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/museum_ID/party/OrganizationName/_name/last"
31
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/voucher","/{taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/museumAccessionNumber,*_ID/observation/*_ID/plot/authorPlotCode}"
2
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/epithet"
3
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/groupType","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=determinationType]]/definedValue"
4
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID->/party/givenName"
5
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID->/party/surName"
6
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Family,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
7
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Genus,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
8
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/AccordingTo/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/plantName/reference_ID->/referenceParty/{givenName,surname}"
9
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
10
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Rank","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/rank"
11
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/note","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=cfAff]]/definedValue"
12
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=cl])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Class,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
13
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Family,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
14
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Genus,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
15
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ord])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Order,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
16
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=phyl_div])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subkingdom,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
17
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=reg])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Kingdom,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
18
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/AccordingTo/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party]])/*_ID/reference/referenceContributor/*_ID/referenceParty/{givenName,surname}"
19
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
20
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ssp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
21
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonName)/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference]/*_ID/*/plantName"
22
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/day","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/day"
23
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/month","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/month"
24
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/year","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/year"
25
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/partyWithRole[role=collector]/*ID->/parties/party/individualName/{givenName,surName}","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID/party/{givenName,middleName,surName}"
26
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/partyWithRole[role=identifier]/*ID->/parties/party/individualName/{givenName,surName}","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=identifier,*_ID/party]/*_ID/party/{givenName,middleName,surName}"
27
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/authorCode","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collectionNumber"
28
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/notes"
29
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/first","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museum_ID/party/OrganizationName/_name/first"
30
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/last","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museum_ID/party/OrganizationName/_name/last"
31
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/voucher","/{taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museumAccessionNumber,*_ID/observation/*_ID/plot/authorPlotCode}"
32 32
"/*ID->/*s/individualOrganism/identificationLabel","/taxonImportance/stemCount/stemLocation/stemCode"
33
"/*ID->/*s/individualOrganism/simpleUserdefined[name=sex]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=sex]]/definedValue"
33
"/*ID->/*s/individualOrganism/simpleUserdefined[name=sex]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=sex]]/definedValue"
34 34
"/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/magnesium","/*_ID/observation/soilObs/definedValue[@fkey=tableRecord_ID,userDefined[tableName=soilObs,userDefinedName=soilMagnesium]]/definedValue"
35 35
"/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/nitrogen","/*_ID/observation/soilObs/definedValue[@fkey=tableRecord_ID,userDefined[tableName=soilObs,userDefinedName=soilNitrogen]]/definedValue"
36 36
"/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/ph","/*_ID/observation/soilObs/soilPH"
......
86 86
"/diameterBaseDistance[baseDistance=0]/diameter","/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemBasalDiameter]]/definedValue"
87 87
"/diameterBaseDistance[baseDistance=1.37]/diameter","/taxonImportance/stemCount/stemDiameter"
88 88
"/height","/taxonImportance/stemCount/stemHeight"
89
"/simpleUserdefined[name=censusNo]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=censusNo]]/definedValue"
89
"/simpleUserdefined[name=censusNo]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=censusNo]]/definedValue"
90 90
"/simpleUserdefined[name=count]/value","/taxonImportance/*/stemCount"
91 91
"/simpleUserdefined[name=coverPercent]/value","/taxonImportance/cover"
92
"/simpleUserdefined[name=habit]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=habit]]/definedValue"
92
"/simpleUserdefined[name=habit]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=habit]]/definedValue"
93 93
"/simpleUserdefined[name=habitat]/value","/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=habitat]]/definedValue"
94 94
"/simpleUserdefined[name=htFirstBranchM]/value","/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=heightFirstBranchM]]/definedValue"
95
"/simpleUserdefined[name=individualCode]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=individualCode]]/definedValue"
95
"/simpleUserdefined[name=individualCode]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=individualCode]]/definedValue"
96 96
"/simpleUserdefined[name=interceptCm]/value","/taxonImportance/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonImportance,userDefinedName=interceptCm]]/definedValue"
97 97
"/simpleUserdefined[name=plantFungusDescription]/value","/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=plantFungusDescription]]/definedValue"
98 98
"/simpleUserdefined[name=stemCanopyForm]/value","/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemCanopyForm]]/definedValue"
mappings/joins/NYBG-VegBank.organisms.csv
1 1
NYBG,VegBank:/taxonObservation
2 2
:0,/*_ID/observation/*_ID/plot/confidentialityStatus
3 3
:1,/taxonImportance/*/stemCount
4
InstitutionCode,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/museum_ID/party/OrganizationName/_name/first
5
CollectionCode,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/museum_ID/party/OrganizationName/_name/last
6
ScientificName,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/*/plantName
7
Kingdom,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Kingdom])/*_ID/*/plantName
8
Phylum,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Subkingdom])/*_ID/*/plantName
9
Class,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Class])/*_ID/*/plantName
10
Order,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Order])/*_ID/*/plantName
11
Family,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Family])/*_ID/*/plantName
12
Genus,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Genus])/*_ID/*/plantName
13
Species,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/*/plantName
14
Subspecies,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Subspecies])/*_ID/*/plantName
15
ScientificNameAuthor,"/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/reference/referenceContributor/*_ID/referenceParty/{givenName,surname}"
16
IdentifiedBy,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/*_ID/party/{givenName,middleName,surName}"
17
YearIdentified,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/interpretationDate/_date/year
18
MonthIdentified,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/interpretationDate/_date/month
19
DayIdentified,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/interpretationDate/_date/day
20
FieldNumber,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collectionNumber
21
Collector,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collector_ID/party/{givenName,middleName,surName}"
4
InstitutionCode,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museum_ID/party/OrganizationName/_name/first"
5
CollectionCode,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museum_ID/party/OrganizationName/_name/last"
6
ScientificName,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference]/*_ID/*/plantName"
7
Kingdom,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Kingdom,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
8
Phylum,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subkingdom,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
9
Class,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Class,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
10
Order,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Order,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
11
Family,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Family,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
12
Genus,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Genus,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
13
Species,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
14
Subspecies,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
15
ScientificNameAuthor,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party]])/*_ID/reference/referenceContributor/*_ID/referenceParty/{givenName,surname}"
16
IdentifiedBy,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=identifier,*_ID/party]/*_ID/party/{givenName,middleName,surName}"
17
YearIdentified,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/year"
18
MonthIdentified,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/month"
19
DayIdentified,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/day"
20
FieldNumber,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collectionNumber"
21
Collector,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID/party/{givenName,middleName,surName}"
22 22
YearCollected,/*_ID/observation/obsStartDate/_date/year
23 23
MonthCollected,/*_ID/observation/obsStartDate/_date/month
24 24
DayCollected,/*_ID/observation/obsStartDate/_date/day
......
34 34
MaximumElevation,"/*_ID/observation/*_ID/plot/{elevation/_avg/max,elevationRange/_range/to}"
35 35
MinimumDepth,/*_ID/observation/waterDepth/min
36 36
MaximumDepth,/*_ID/observation/waterDepth/max
37
Sex,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=sex]]/definedValue"
38
Notes,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/notes
37
Sex,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=sex]]/definedValue"
38
Notes,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/notes"
39 39
Habitat,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=habitat]]/definedValue"
40 40
PlantFungusDescription,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=plantFungusDescription]]/definedValue"
41 41
Substrate,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=substrate]]/definedValue"
42 42
Vegetation,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=vegetation]]/definedValue"
43
UniqueNYInternalRecordNumber,"/{taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/museumAccessionNumber,*_ID/observation/*_ID/plot/authorPlotCode}"
43
UniqueNYInternalRecordNumber,"/{taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museumAccessionNumber,*_ID/observation/*_ID/plot/authorPlotCode}"
mappings/joins/SALVIAS-VegBank.organisms.csv
1 1
SALVIAS,VegBank:/taxonObservation
2
OBSERVATION_ID,"/{taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/museumAccessionNumber,*_ID/observation/*_ID/plot/authorPlotCode}"
2
OBSERVATION_ID,"/{taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museumAccessionNumber,*_ID/observation/*_ID/plot/authorPlotCode}"
3 3
plot_code,/*_ID/observation/*_ID/plot/PARENT_ID->/*_ID/observation/*_ID/plot/authorPlotCode
4
census_no,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=censusNo]]/definedValue"
4
census_no,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=censusNo]]/definedValue"
5 5
census_date,/*_ID/observation/obsStartDate
6 6
subplot,"/*_ID/observation/{*_ID/plot/authorPlotCode,authorObsCode}"
7
individual_code,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=individualCode]]/definedValue"
7
individual_code,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=individualCode]]/definedValue"
8 8
tag1,/taxonImportance/stemCount/stemLocation/stemCode
9 9
tag2,/taxonImportance/stemCount/stemLocation/stemCode
10 10
x_position,/taxonImportance/stemCount/stemLocation/stemXPosition
11 11
y_position,/taxonImportance/stemCount/stemLocation/stemYPosition
12
coll_number,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collectionNumber
13
coll_lastname,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collector_ID->/party/surName
14
coll_firstname,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collector_ID->/party/givenName
15
det_type,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=determinationType]]/definedValue"
16
family,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Family])/*_ID/*/plantName
17
genus,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Genus])/*_ID/*/plantName
18
specific_epithet,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/*/plantName
19
specific_authority,"/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/plantName/reference_ID->/referenceParty/{givenName,surname}"
20
infra_rank_1,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Subspecies])/*_ID/*/plantName/rank
21
infra_ep_1,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Subspecies])/*_ID/*/plantName/epithet
22
cf_aff,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=cfAff]]/definedValue"
23
habit,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=habit]]/definedValue"
12
coll_number,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collectionNumber"
13
coll_lastname,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID->/party/surName"
14
coll_firstname,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID->/party/givenName"
15
det_type,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=determinationType]]/definedValue"
16
family,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Family,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
17
genus,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Genus,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
18
specific_epithet,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
19
specific_authority,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/plantName/reference_ID->/referenceParty/{givenName,surname}"
20
infra_rank_1,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/rank"
21
infra_ep_1,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/epithet"
22
cf_aff,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=cfAff]]/definedValue"
23
habit,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=habit]]/definedValue"
24 24
no_of_individuals,/taxonImportance/*/stemCount
25 25
cover_percent,/taxonImportance/cover
26 26
intercept_cm,"/taxonImportance/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonImportance,userDefinedName=interceptCm]]/definedValue"
......
35 35
stem_canopy_form,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemCanopyForm]]/definedValue"
36 36
stem_canopy_position,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemCanopyPosition]]/definedValue"
37 37
stem_liana_infestation,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemLianaInfestation]]/definedValue"
38
notes,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/notes
38
notes,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/notes"
mappings/SALVIAS-VegX.organisms.csv
20 20
"fam_status",
21 21
"gen_status",
22 22
"species_status",
23
"family","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name"
24
"genus","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name"
25
"specific_epithet","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name"
26
"specific_authority","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/AccordingTo/Simple"
27
"infra_rank_1","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Rank"
28
"infra_ep_1","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Name"
29
"cf_aff","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=TaxonScrubber]/note"
23
"family","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name"
24
"genus","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name"
25
"specific_epithet","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name"
26
"specific_authority","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/AccordingTo/Simple"
27
"infra_rank_1","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Rank"
28
"infra_ep_1","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Name"
29
"cf_aff","/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/note"
30 30
"comments",
31 31
"habit","/simpleUserdefined[name=habit]/value"
32 32
"no_of_individuals","/simpleUserdefined[name=count]/value"

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