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Revision 93

Added by Aaron Marcuse-Kubitza about 13 years ago

Started filling in required values for VegBank fields in mappings. Will need to refactor to move these to metadata for the datasources.

View differences:

SALVIAS-VegBank.organisms.csv
1 1 
SALVIAS,VegBank:/taxonObservation
2 
OBSERVATION_ID,"/{taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/museumAccessionNumber,*_ID/observation/*_ID/plot/authorPlotCode}"
2 
OBSERVATION_ID,"/{taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museumAccessionNumber,*_ID/observation/*_ID/plot/authorPlotCode}"
3 3 
plot_code,/*_ID/observation/*_ID/plot/PARENT_ID->/*_ID/observation/*_ID/plot/authorPlotCode
4 
census_no,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=censusNo]]/definedValue"
4 
census_no,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=censusNo]]/definedValue"
5 5 
census_date,/*_ID/observation/obsStartDate
6 6 
subplot,"/*_ID/observation/{*_ID/plot/authorPlotCode,authorObsCode}"
7 
individual_code,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=individualCode]]/definedValue"
7 
individual_code,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=individualCode]]/definedValue"
8 8 
tag1,/taxonImportance/stemCount/stemLocation/stemCode
9 9 
tag2,/taxonImportance/stemCount/stemLocation/stemCode
10 10 
x_position,/taxonImportance/stemCount/stemLocation/stemXPosition
11 11 
y_position,/taxonImportance/stemCount/stemLocation/stemYPosition
12 
coll_number,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collectionNumber
13 
coll_lastname,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collector_ID->/party/surName
14 
coll_firstname,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/collector_ID->/party/givenName
15 
det_type,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=determinationType]]/definedValue"
16 
family,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Family])/*_ID/*/plantName
17 
genus,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Genus])/*_ID/*/plantName
18 
specific_epithet,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/*/plantName
19 
specific_authority,"/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/plantName/reference_ID->/referenceParty/{givenName,surname}"
20 
infra_rank_1,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Subspecies])/*_ID/*/plantName/rank
21 
infra_ep_1,/taxonImportance/stemCount/stemLocation/taxonInterpretation(/*_ID/plantConcept[plantStatus/plantLevel=Subspecies])/*_ID/*/plantName/epithet
22 
cf_aff,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=cfAff]]/definedValue"
23 
habit,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=habit]]/definedValue"
12 
coll_number,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collectionNumber"
13 
coll_lastname,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID->/party/surName"
14 
coll_firstname,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID->/party/givenName"
15 
det_type,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=determinationType]]/definedValue"
16 
family,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Family,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
17 
genus,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Genus,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
18 
specific_epithet,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
19 
specific_authority,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/plantName/reference_ID->/referenceParty/{givenName,surname}"
20 
infra_rank_1,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/rank"
21 
infra_ep_1,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/epithet"
22 
cf_aff,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=cfAff]]/definedValue"
23 
habit,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=habit]]/definedValue"
24 24 
no_of_individuals,/taxonImportance/*/stemCount
25 25 
cover_percent,/taxonImportance/cover
26 26 
intercept_cm,"/taxonImportance/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonImportance,userDefinedName=interceptCm]]/definedValue"
......
35 35 
stem_canopy_form,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemCanopyForm]]/definedValue"
36 36 
stem_canopy_position,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemCanopyPosition]]/definedValue"
37 37 
stem_liana_infestation,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemLianaInfestation]]/definedValue"
38 
notes,/taxonImportance/stemCount/stemLocation/taxonInterpretation[PLANTCONCEPT_ID=]/notes
38 
notes,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/notes"

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