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| Revision:
Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 7564 over 11 years Aaron Marcuse-Kubitza lib/common.Makefile: remote server: Use jupiter...
  bin 8943 over 11 years Aaron Marcuse-Kubitza bin/my2pg: support $sql_ascii mode, where varbi...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 8798 over 11 years Aaron Marcuse-Kubitza exports/: svn:ignore *.csv
  inputs 9391 over 11 years Aaron Marcuse-Kubitza inputs/GBIF/raw_occurrence_record/run: moved ta...
  lib 9392 over 11 years Aaron Marcuse-Kubitza lib/runscripts/table.run: import(): added step ...
  mappings 8235 over 11 years Aaron Marcuse-Kubitza mappings/VegCore.htm: Renamed salvias_plots tab...
  planning 8457 over 11 years Aaron Marcuse-Kubitza Moved validation/ under planning/workflow/
  schemas 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
  web 9389 over 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
Makefile 12.6 KB 8844 over 11 years Aaron Marcuse-Kubitza bugfix: /Makefile: moved schemas/install from i...
README.TXT 21 KB 8945 over 11 years Aaron Marcuse-Kubitza /README.TXT: Maintenance: to synchronize vegbie...
fix_perms 97 Bytes 7560 over 11 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 450 Bytes 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
9392 05/15/2013 11:28 PM Aaron Marcuse-Kubitza

lib/runscripts/table.run: import(): added step to load the data into the staging table before postprocessing it

9391 05/15/2013 11:27 PM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record/run: moved table.tsv.md5/make() and invocation of it to inputs/GBIF/table.run because it's general to all tables (which would all use table.tsv for this datasource). use $target_filename in calling table.tsv.md5/make from table.tsv/make.

9390 05/15/2013 11:21 PM Aaron Marcuse-Kubitza

bugfix: lib/sql.py: parse_exception(): typed_name_re: need to ensure that full name is matched rather than just first character

9389 05/15/2013 10:26 PM Aaron Marcuse-Kubitza

web/links/index.htm: updated to Firefox bookmarks. Mountain Lion upgrade: added Python psycopg2, Python OrderedDict, X11.

9388 05/15/2013 07:51 PM Aaron Marcuse-Kubitza

lib/runscripts/table.run: table_make(): run canon_rel_path on the datasrc dir so it's displayed as the direct path to it, without ..

9387 05/15/2013 07:47 PM Aaron Marcuse-Kubitza

lib/runscripts/table.run: table_make(): moved comment about "${@/#/$table/}" to right after the line it describes

9386 05/15/2013 07:44 PM Aaron Marcuse-Kubitza

lib/runscripts/table.run: input_make(): renamed to table_make() to make it clear that the target names are relative to the table subdir itself, not the datasrc dir. it was previously called input_make because it used inputs/input.Makefile directly, but now will use any Makefile in the datasrc dir.

9385 05/15/2013 06:44 PM Aaron Marcuse-Kubitza

added inputs/GBIF/Makefile, which links to ../input.Makefile, to allow running make directly in the datasrc dir (i.e. without --makefile=.../input.Makefile). this is required by the runscripts.

9384 05/15/2013 03:34 PM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record/run: table.tsv.md5/make(): don't add extra .md5 extension to $target_filename because it already has the extension as part of the target name (now that this command is run in its own make target rather than in table.tsv/make())

9383 05/15/2013 03:30 PM Aaron Marcuse-Kubitza

lib/sql_gen.py: import OrderedDict from collections instead of ordereddict for Mac 10.8 Mountain Lion upgrade

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