Revision 9410
Added by Aaron Marcuse-Kubitza over 11 years ago
| inputs/GBIF/raw_occurrence_record/run | ||
|---|---|---|
| 8 | 8 |
{
|
| 9 | 9 |
echo_func; set_make_vars |
| 10 | 10 |
|
| 11 |
cols=' |
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| 12 |
id, institution_code, collection_code, catalogue_number, |
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| 13 |
scientific_name, |
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| 14 |
family, genus, species, subspecies/*helps TNRS to resolve species*/, |
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| 15 |
latitude, longitude, country, state_province, county, locality' \ |
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| 16 | 11 |
filter=" |
| 17 | 12 |
institution_code IN ($(cat "$top_dir"/herbaria.sql))" \ |
| 18 | 13 |
table.tsv/make__src_table_run |
Also available in: Unified diff
inputs/GBIF/raw_occurrence_record/run: table.tsv/make(): remove explicit cols list to include all cols. the file size of the generated table.tsv will increase by ~3x, but should remain reasonably-sized compared to our available disk space.