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Revision 96

Added by Aaron Marcuse-Kubitza about 13 years ago

Changed mappings to use keys vs. attrs

View differences:

scripts/util/NYSpecimenDataAmericas.xml
2 2 
<VegX>
3 3 
    <individualOrganismObservations>
4 4 
        <individualOrganismObservation id="0">
5 
            <plotObservationID>0</plotObservationID>
6 5 
            <simpleUserdefined>
7 6 
                <name>count</name>
8 7 
                <value>1</value>
9 8 
            </simpleUserdefined>
10 9 
            <individualOrganismID>0</individualOrganismID>
10 
            <plotObservationID>0</plotObservationID>
11 11 
            <simpleUserdefined>
12 12 
                <name>habitat</name>
13 13 
                <value>Floodplain forest</value>
......
18 18 
            </simpleUserdefined>
19 19 
        </individualOrganismObservation>
20 20 
        <individualOrganismObservation id="1">
21 
            <plotObservationID>1</plotObservationID>
22 21 
            <simpleUserdefined>
23 22 
                <name>count</name>
24 23 
                <value>1</value>
25 24 
            </simpleUserdefined>
26 25 
            <individualOrganismID>1</individualOrganismID>
26 
            <plotObservationID>1</plotObservationID>
27 27 
        </individualOrganismObservation>
28 28 
    </individualOrganismObservations>
29 
    <plotObservations>
30 
        <plotObservation id="0">
31 
            <plotUniqueIdentifierID>0</plotUniqueIdentifierID>
32 
            <obsStartDate>1984-8-20</obsStartDate>
33 
        </plotObservation>
34 
        <plotObservation id="1">
35 
            <plotUniqueIdentifierID>1</plotUniqueIdentifierID>
36 
            <obsStartDate>1994-1-17</obsStartDate>
37 
        </plotObservation>
38 
    </plotObservations>
39 
    <plots>
40 
        <plot id="0">
41 
            <simpleUserdefined>
42 
                <name>confidentialityStatus</name>
43 
                <value>0</value>
44 
            </simpleUserdefined>
45 
            <country>Peru</country>
46 
            <state>Madre de Dios</state>
47 
            <county>Man&#250;</county>
48 
            <simpleUserdefined>
49 
                <name>locality</name>
50 
                <value>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station</value>
51 
            </simpleUserdefined>
52 
            <geospatial>
53 
                <DecimalLongitude>-71.40</DecimalLongitude>
54 
                <DecimalLatitude>-11.80</DecimalLatitude>
55 
                <minimumElevationInMeters>350</minimumElevationInMeters>
56 
                <maximumElevationInMeters>350</maximumElevationInMeters>
57 
            </geospatial>
58 
        </plot>
59 
        <plot id="1">
60 
            <simpleUserdefined>
61 
                <name>confidentialityStatus</name>
62 
                <value>0</value>
63 
            </simpleUserdefined>
64 
            <country>Belize</country>
65 
            <state>Belize District</state>
66 
            <simpleUserdefined>
67 
                <name>locality</name>
68 
                <value>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</value>
69 
            </simpleUserdefined>
70 
            <geospatial>
71 
                <DecimalLongitude>-88.50</DecimalLongitude>
72 
                <DecimalLatitude>17.40</DecimalLatitude>
73 
                <minimumElevationInMeters>15</minimumElevationInMeters>
74 
                <maximumElevationInMeters>15</maximumElevationInMeters>
75 
            </geospatial>
76 
        </plot>
77 
    </plots>
78 29 
    <individualOrganisms>
79 30 
        <individualOrganism id="0">
80 31 
            <taxonNameUsageConceptsID>0</taxonNameUsageConceptsID>
......
234 185 
            <Name>Scrophulariaceae</Name>
235 186 
        </taxonConcept>
236 187 
    </taxonConcepts>
188 
    <plotObservations>
189 
        <plotObservation id="0">
190 
            <obsStartDate>1984-8-20</obsStartDate>
191 
            <plotUniqueIdentifierID>0</plotUniqueIdentifierID>
192 
        </plotObservation>
193 
        <plotObservation id="1">
194 
            <obsStartDate>1994-1-17</obsStartDate>
195 
            <plotUniqueIdentifierID>1</plotUniqueIdentifierID>
196 
        </plotObservation>
197 
    </plotObservations>
198 
    <plots>
199 
        <plot id="0">
200 
            <country>Peru</country>
201 
            <state>Madre de Dios</state>
202 
            <county>Man&#250;</county>
203 
            <simpleUserdefined>
204 
                <name>locality</name>
205 
                <value>Parque Nacional del Manu. R&#237;o Manu: Cocha Casha Station</value>
206 
            </simpleUserdefined>
207 
            <geospatial>
208 
                <DecimalLongitude>-71.40</DecimalLongitude>
209 
                <DecimalLatitude>-11.80</DecimalLatitude>
210 
                <minimumElevationInMeters>350</minimumElevationInMeters>
211 
                <maximumElevationInMeters>350</maximumElevationInMeters>
212 
            </geospatial>
213 
        </plot>
214 
        <plot id="1">
215 
            <country>Belize</country>
216 
            <state>Belize District</state>
217 
            <simpleUserdefined>
218 
                <name>locality</name>
219 
                <value>Belize Zoo, in savanna plot immediately behind zoo. Mile 31 on Western Highway</value>
220 
            </simpleUserdefined>
221 
            <geospatial>
222 
                <DecimalLongitude>-88.50</DecimalLongitude>
223 
                <DecimalLatitude>17.40</DecimalLatitude>
224 
                <minimumElevationInMeters>15</minimumElevationInMeters>
225 
                <maximumElevationInMeters>15</maximumElevationInMeters>
226 
            </geospatial>
227 
        </plot>
228 
    </plots>
237 229 
</VegX>
mappings/VegX-VegBank.organisms.csv
1 1 
"VegX:/*s/individualOrganismObservation","VegBank:/taxonObservation"
2 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/epithet"
3 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/groupType","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=determinationType]]/definedValue"
4 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID->/party/givenName"
5 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID->/party/surName"
6 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Family,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
7 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Genus,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
8 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/AccordingTo/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/plantName/reference_ID->/referenceParty/{givenName,surname}"
9 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
10 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Rank","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/rank"
11 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/note","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=cfAff]]/definedValue"
12 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=cl])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Class,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
13 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Family,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
14 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Genus,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
15 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ord])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Order,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
16 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=phyl_div])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subkingdom,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
17 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=reg])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Kingdom,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
18 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/AccordingTo/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party]])/*_ID/reference/referenceContributor/*_ID/referenceParty/{givenName,surname}"
19 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
20 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ssp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
21 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonName)/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference]/*_ID/*/plantName"
22 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/day","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/day"
23 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/month","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/month"
24 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/year","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/year"
25 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/partyWithRole[role=collector]/*ID->/parties/party/individualName/{givenName,surName}","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID/party/{givenName,middleName,surName}"
26 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/partyWithRole[role=identifier]/*ID->/parties/party/individualName/{givenName,surName}","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=identifier,*_ID/party]/*_ID/party/{givenName,middleName,surName}"
27 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/authorCode","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collectionNumber"
28 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/notes"
29 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/first","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museum_ID/party/OrganizationName/_name/first"
30 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/last","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museum_ID/party/OrganizationName/_name/last"
31 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/voucher","/{taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museumAccessionNumber,*_ID/observation/*_ID/plot/authorPlotCode}"
2 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Subspecies]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/_name/last"
3 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/groupType","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=determinationType]]/definedValue"
4 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/collector_ID->/party/givenName"
5 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/collector_ID->/party/surName"
6 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Family]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
7 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Genus]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
8 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/AccordingTo/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/plantName/reference_ID->/referenceParty/{givenName,surname}"
9 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Species]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
10 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Rank","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Subspecies]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/_name/first"
11 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/note","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=cfAff]]/definedValue"
12 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=cl])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Class]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
13 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Family]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
14 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Genus]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
15 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ord])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Order]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
16 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=phyl_div])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Subkingdom]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
17 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=reg])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Kingdom]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
18 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/AccordingTo/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/reference/referenceContributor/*_ID/referenceParty/{givenName,surname}"
19 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer]:[interpretationType=""Computer (automated)"",originalInterpretation=false,currentInterpretation=true,*_ID/party](/*_ID/plantConcept[plantStatus/plantLevel=Species]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
20 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ssp])/Name","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Subspecies]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
21 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonName)/Simple","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]:[interpretationType=Author,originalInterpretation=true,currentInterpretation=false,*_ID/party]/*_ID/plantConcept[plantStatus/plantLevel=Species]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference]/*_ID/*/plantName"
22 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/day","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/interpretationDate/_date/day"
23 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/month","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/interpretationDate/_date/month"
24 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/date/_date/year","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/interpretationDate/_date/year"
25 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/partyWithRole[role=collector]/*ID->/parties/party/individualName/{givenName,surName}","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/collector_ID/party/{givenName,middleName,surName}"
26 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID]/partyWithRole[role=identifier]/*ID->/parties/party/individualName/{givenName,surName}","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=identifier]:[interpretationType=Author,originalInterpretation=false,currentInterpretation=true]/*_ID/party/{givenName,middleName,surName}"
27 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/authorCode","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/collectionNumber"
28 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/notes"
29 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/first","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/museum_ID/party/OrganizationName/_name/first"
30 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/last","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/museum_ID/party/OrganizationName/_name/last"
31 
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/voucher","/{taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/museumAccessionNumber,*_ID/observation/*_ID/plot:[confidentialityStatus=0]/authorPlotCode}"
32 32 
"/*ID->/*s/individualOrganism/identificationLabel","/taxonImportance/stemCount/stemLocation/stemCode"
33 
"/*ID->/*s/individualOrganism/simpleUserdefined[name=sex]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=sex]]/definedValue"
33 
"/*ID->/*s/individualOrganism/simpleUserdefined[name=sex]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=sex]]/definedValue"
34 34 
"/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/magnesium","/*_ID/observation/soilObs/definedValue[@fkey=tableRecord_ID,userDefined[tableName=soilObs,userDefinedName=soilMagnesium]]/definedValue"
35 35 
"/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/nitrogen","/*_ID/observation/soilObs/definedValue[@fkey=tableRecord_ID,userDefined[tableName=soilObs,userDefinedName=soilNitrogen]]/definedValue"
36 36 
"/*ID->/*s/plotObservation->/*s/abioticObservation[*ID]/ph","/*_ID/observation/soilObs/soilPH"
......
64 64 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/minimumDepthInMeters","/*_ID/observation/waterDepth/min"
65 65 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters","/*_ID/observation/*_ID/plot/{elevation/_avg/min,elevationRange/_range/from}"
66 66 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation","/*_ID/observation/*_ID/plot/elevation"
67 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier","/*_ID/observation/*_ID/plot/authorPlotCode"
68 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier","/*_ID/observation/{*_ID/plot/authorPlotCode,authorObsCode}"
69 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/relatedSpatialItem/relatedItem[relationshipType=parentPlot]/relatedItemID->/*s/plot/plotUniqueIdentifier","/*_ID/observation/*_ID/plot/PARENT_ID->/*_ID/observation/*_ID/plot/authorPlotCode"
70 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=confidentialityStatus]/value","/*_ID/observation/*_ID/plot/confidentialityStatus"
67 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier","/*_ID/observation/{*_ID/plot:[confidentialityStatus=0]/authorPlotCode,authorObsCode}"
68 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/relatedSpatialItem/relatedItem[relationshipType=parentPlot]/relatedItemID->/*s/plot/plotUniqueIdentifier","/*_ID/observation/*_ID/plot/PARENT_ID/plot:[confidentialityStatus=0]/authorPlotCode"
71 69 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=locality]/value","/*_ID/observation/*_ID/plot/place/*_ID/namedPlace/placeDescription"
72 70 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=localityDescription]/value","/*_ID/observation/*_ID/plot/place/*_ID/namedPlace/placeDescription"
73 71 
"/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=majorGeo]/value","/*_ID/observation/*_ID/plot/place(/*_ID/namedPlace[placeSystem=continent])/placeName"
......
86 84 
"/diameterBaseDistance[baseDistance=0]/diameter","/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemBasalDiameter]]/definedValue"
87 85 
"/diameterBaseDistance[baseDistance=1.37]/diameter","/taxonImportance/stemCount/stemDiameter"
88 86 
"/height","/taxonImportance/stemCount/stemHeight"
89 
"/simpleUserdefined[name=censusNo]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=censusNo]]/definedValue"
87 
"/simpleUserdefined[name=censusNo]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=censusNo]]/definedValue"
90 88 
"/simpleUserdefined[name=count]/value","/taxonImportance/*/stemCount"
91 89 
"/simpleUserdefined[name=coverPercent]/value","/taxonImportance/cover"
92 
"/simpleUserdefined[name=habit]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=habit]]/definedValue"
90 
"/simpleUserdefined[name=habit]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=habit]]/definedValue"
93 91 
"/simpleUserdefined[name=habitat]/value","/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=habitat]]/definedValue"
94 92 
"/simpleUserdefined[name=htFirstBranchM]/value","/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=heightFirstBranchM]]/definedValue"
95 
"/simpleUserdefined[name=individualCode]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=individualCode]]/definedValue"
93 
"/simpleUserdefined[name=individualCode]/value","/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=individualCode]]/definedValue"
96 94 
"/simpleUserdefined[name=interceptCm]/value","/taxonImportance/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonImportance,userDefinedName=interceptCm]]/definedValue"
97 95 
"/simpleUserdefined[name=plantFungusDescription]/value","/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=plantFungusDescription]]/definedValue"
98 96 
"/simpleUserdefined[name=stemCanopyForm]/value","/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemCanopyForm]]/definedValue"
mappings/NYBG-VegX.organisms.csv
1 1 
"NYBG","VegX:/*s/individualOrganismObservation"
2 
":0","/*ID->/*s/plotObservation/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=confidentialityStatus]/value"
3 2 
":1","/simpleUserdefined[name=count]/value"
4 3 
"key",
5 4 
"DateLastModified",
mappings/joins/NYBG-VegBank.organisms.csv
1 1 
NYBG,VegBank:/taxonObservation
2 
:0,/*_ID/observation/*_ID/plot/confidentialityStatus
3 2 
:1,/taxonImportance/*/stemCount
4 
InstitutionCode,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museum_ID/party/OrganizationName/_name/first"
5 
CollectionCode,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museum_ID/party/OrganizationName/_name/last"
6 
ScientificName,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference]/*_ID/*/plantName"
7 
Kingdom,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Kingdom,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
8 
Phylum,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subkingdom,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
9 
Class,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Class,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
10 
Order,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Order,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
11 
Family,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Family,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
12 
Genus,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Genus,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
13 
Species,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
14 
Subspecies,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
15 
ScientificNameAuthor,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party]])/*_ID/reference/referenceContributor/*_ID/referenceParty/{givenName,surname}"
16 
IdentifiedBy,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=identifier,*_ID/party]/*_ID/party/{givenName,middleName,surName}"
17 
YearIdentified,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/year"
18 
MonthIdentified,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/month"
19 
DayIdentified,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/interpretationDate/_date/day"
20 
FieldNumber,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collectionNumber"
21 
Collector,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID/party/{givenName,middleName,surName}"
3 
InstitutionCode,/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/museum_ID/party/OrganizationName/_name/first
4 
CollectionCode,/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/museum_ID/party/OrganizationName/_name/last
5 
ScientificName,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]:[interpretationType=Author,originalInterpretation=true,currentInterpretation=false,*_ID/party]/*_ID/plantConcept[plantStatus/plantLevel=Species]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference]/*_ID/*/plantName"
6 
Kingdom,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Kingdom]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
7 
Phylum,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Subkingdom]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
8 
Class,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Class]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
9 
Order,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Order]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
10 
Family,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Family]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
11 
Genus,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Genus]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
12 
Species,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer]:[interpretationType=""Computer (automated)"",originalInterpretation=false,currentInterpretation=true,*_ID/party](/*_ID/plantConcept[plantStatus/plantLevel=Species]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
13 
Subspecies,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Subspecies]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
14 
ScientificNameAuthor,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/reference/referenceContributor/*_ID/referenceParty/{givenName,surname}"
15 
IdentifiedBy,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=identifier]:[interpretationType=Author,originalInterpretation=false,currentInterpretation=true]/*_ID/party/{givenName,middleName,surName}"
16 
YearIdentified,/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/interpretationDate/_date/year
17 
MonthIdentified,/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/interpretationDate/_date/month
18 
DayIdentified,/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/interpretationDate/_date/day
19 
FieldNumber,/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/collectionNumber
20 
Collector,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/collector_ID/party/{givenName,middleName,surName}"
22 21 
YearCollected,/*_ID/observation/obsStartDate/_date/year
23 22 
MonthCollected,/*_ID/observation/obsStartDate/_date/month
24 23 
DayCollected,/*_ID/observation/obsStartDate/_date/day
......
34 33 
MaximumElevation,"/*_ID/observation/*_ID/plot/{elevation/_avg/max,elevationRange/_range/to}"
35 34 
MinimumDepth,/*_ID/observation/waterDepth/min
36 35 
MaximumDepth,/*_ID/observation/waterDepth/max
37 
Sex,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=sex]]/definedValue"
38 
Notes,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/notes"
36 
Sex,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=sex]]/definedValue"
37 
Notes,/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/notes
39 38 
Habitat,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=habitat]]/definedValue"
40 39 
PlantFungusDescription,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=plantFungusDescription]]/definedValue"
41 40 
Substrate,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=substrate]]/definedValue"
42 41 
Vegetation,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=vegetation]]/definedValue"
43 
UniqueNYInternalRecordNumber,"/{taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museumAccessionNumber,*_ID/observation/*_ID/plot/authorPlotCode}"
42 
UniqueNYInternalRecordNumber,"/{taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/museumAccessionNumber,*_ID/observation/*_ID/plot:[confidentialityStatus=0]/authorPlotCode}"
mappings/joins/SALVIAS-VegBank.plots.csv
1 1 
SALVIAS,VegBank:/observation
2 2 
project,/*_ID/project/projectName
3 
plot_code,"/{*_ID/plot/authorPlotCode,authorObsCode}"
3 
plot_code,"/{*_ID/plot:[confidentialityStatus=0]/authorPlotCode,authorObsCode}"
4 4 
major_geo,/*_ID/plot/place(/*_ID/namedPlace[placeSystem=continent])/placeName
5 5 
country,"/*_ID/plot/place(/*_ID/namedPlace[placeSystem=""area|country|territory""])/placeName"
6 6 
pol1,"/*_ID/plot/place(/*_ID/namedPlace[placeSystem=""region|state|province""])/placeName"
mappings/joins/SALVIAS-VegBank.organisms.csv
1 1 
SALVIAS,VegBank:/taxonObservation
2 
OBSERVATION_ID,"/{taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/museumAccessionNumber,*_ID/observation/*_ID/plot/authorPlotCode}"
3 
plot_code,/*_ID/observation/*_ID/plot/PARENT_ID->/*_ID/observation/*_ID/plot/authorPlotCode
4 
census_no,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=censusNo]]/definedValue"
2 
OBSERVATION_ID,"/{taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/museumAccessionNumber,*_ID/observation/*_ID/plot:[confidentialityStatus=0]/authorPlotCode}"
3 
plot_code,/*_ID/observation/*_ID/plot/PARENT_ID/plot:[confidentialityStatus=0]/authorPlotCode
4 
census_no,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=censusNo]]/definedValue"
5 5 
census_date,/*_ID/observation/obsStartDate
6 
subplot,"/*_ID/observation/{*_ID/plot/authorPlotCode,authorObsCode}"
7 
individual_code,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=individualCode]]/definedValue"
6 
subplot,"/*_ID/observation/{*_ID/plot:[confidentialityStatus=0]/authorPlotCode,authorObsCode}"
7 
individual_code,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=individualCode]]/definedValue"
8 8 
tag1,/taxonImportance/stemCount/stemLocation/stemCode
9 9 
tag2,/taxonImportance/stemCount/stemLocation/stemCode
10 10 
x_position,/taxonImportance/stemCount/stemLocation/stemXPosition
11 11 
y_position,/taxonImportance/stemCount/stemLocation/stemYPosition
12 
coll_number,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collectionNumber"
13 
coll_lastname,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID->/party/surName"
14 
coll_firstname,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/collector_ID->/party/givenName"
15 
det_type,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=determinationType]]/definedValue"
16 
family,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Family,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
17 
genus,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Genus,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
18 
specific_epithet,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
19 
specific_authority,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Species,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/plantName/reference_ID->/referenceParty/{givenName,surname}"
20 
infra_rank_1,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/rank"
21 
infra_ep_1,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=""Computer (automated)"",ROLE_ID/aux_Role/roleCode=computer,*_ID/party](/*_ID/plantConcept[plantStatus[plantLevel=Subspecies,plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/epithet"
22 
cf_aff,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=cfAff]]/definedValue"
23 
habit,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=habit]]/definedValue"
12 
coll_number,/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/collectionNumber
13 
coll_lastname,/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/collector_ID->/party/surName
14 
coll_firstname,/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/collector_ID->/party/givenName
15 
det_type,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=determinationType]]/definedValue"
16 
family,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Family]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
17 
genus,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Genus]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
18 
specific_epithet,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Species]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName"
19 
specific_authority,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Species])/*_ID/plantName/reference_ID->/referenceParty/{givenName,surname}"
20 
infra_rank_1,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Subspecies]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/_name/first"
21 
infra_ep_1,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=computer](/*_ID/plantConcept[plantStatus/plantLevel=Subspecies]:[plantStatus:[plantConceptStatus=accepted,startDate=epoch,*_ID/party],*_ID/reference])/*_ID/*/plantName/_name/last"
22 
cf_aff,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=cfAff]]/definedValue"
23 
habit,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonInterpretation,userDefinedName=habit]]/definedValue"
24 24 
no_of_individuals,/taxonImportance/*/stemCount
25 25 
cover_percent,/taxonImportance/cover
26 26 
intercept_cm,"/taxonImportance/definedValue[@fkey=tableRecord_ID,userDefined[tableName=taxonImportance,userDefinedName=interceptCm]]/definedValue"
......
35 35 
stem_canopy_form,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemCanopyForm]]/definedValue"
36 36 
stem_canopy_position,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemCanopyPosition]]/definedValue"
37 37 
stem_liana_infestation,"/taxonImportance/stemCount/stemLocation/definedValue[@fkey=tableRecord_ID,userDefined[tableName=stemLocation,userDefinedName=stemLianaInfestation]]/definedValue"
38 
notes,"/taxonImportance/stemCount/stemLocation/taxonInterpretation[interpretationType=Author,ROLE_ID/aux_Role/roleCode=collector,*_ID/party]/notes"
38 
notes,/taxonImportance/stemCount/stemLocation/taxonInterpretation[ROLE_ID/aux_Role/roleCode=collector]/notes
mappings/VegX-VegBank.plots.csv
32 32 
/*UniqueIdentifierID->/*s/plot/geospatial/minimumDepthInMeters,/waterDepth/min
33 33 
/*UniqueIdentifierID->/*s/plot/geospatial/minimumElevationInMeters,"/*_ID/plot/{elevation/_avg/min,elevationRange/_range/from}"
34 34 
/*UniqueIdentifierID->/*s/plot/geospatial/verbatimElevation,/*_ID/plot/elevation
35 
/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,/*_ID/plot/authorPlotCode
36 
/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,"/{*_ID/plot/authorPlotCode,authorObsCode}"
37 
/*UniqueIdentifierID->/*s/plot/relatedSpatialItem/relatedItem[relationshipType=parentPlot]/relatedItemID->/*s/plot/plotUniqueIdentifier,/*_ID/plot/PARENT_ID->/*_ID/observation/*_ID/plot/authorPlotCode
38 
/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=confidentialityStatus]/value,/*_ID/plot/confidentialityStatus
35 
/*UniqueIdentifierID->/*s/plot/plotUniqueIdentifier,"/{*_ID/plot:[confidentialityStatus=0]/authorPlotCode,authorObsCode}"
36 
/*UniqueIdentifierID->/*s/plot/relatedSpatialItem/relatedItem[relationshipType=parentPlot]/relatedItemID->/*s/plot/plotUniqueIdentifier,/*_ID/plot/PARENT_ID/plot:[confidentialityStatus=0]/authorPlotCode
39 37 
/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=locality]/value,/*_ID/plot/place/*_ID/namedPlace/placeDescription
40 38 
/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=localityDescription]/value,/*_ID/plot/place/*_ID/namedPlace/placeDescription
41 39 
/*UniqueIdentifierID->/*s/plot/simpleUserdefined[name=majorGeo]/value,/*_ID/plot/place(/*_ID/namedPlace[placeSystem=continent])/placeName

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