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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 9496 over 11 years Aaron Marcuse-Kubitza added backups/*.md5
  bin 9530 over 11 years Aaron Marcuse-Kubitza bin/tnrs_db: documented how to estimate total r...
  config 7801 over 11 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 8798 over 11 years Aaron Marcuse-Kubitza exports/: svn:ignore *.csv
  inputs 9644 over 11 years Aaron Marcuse-Kubitza added inputs/GBIF/raw_occurrence_record/postpro...
  lib 9642 over 11 years Aaron Marcuse-Kubitza bugfix: lib/sh/db.sh: mysql_import(): need to u...
  mappings 9459 over 11 years Aaron Marcuse-Kubitza bugfix: mappings/VegCore-VegBIEN.csv: place.geo...
  planning 9403 over 11 years Aaron Marcuse-Kubitza added planning/workflow/validation/GeoDistKM.sq...
  schemas 9630 over 11 years Aaron Marcuse-Kubitza lib/sh/local.sh: database connection vars: conn...
  web 9614 over 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
Makefile 12.6 KB 8844 over 11 years Aaron Marcuse-Kubitza bugfix: /Makefile: moved schemas/install from i...
README.TXT 22.8 KB 9532 over 11 years Aaron Marcuse-Kubitza bugfix: README.TXT: Full database import: scree...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 almost 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 450 Bytes 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
9644 05/30/2013 08:28 AM Aaron Marcuse-Kubitza

added inputs/GBIF/raw_occurrence_record/postprocess.sql, which removes institutions that we have direct data for
9643 05/30/2013 08:18 AM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record/run: herbaria_filter/make(): skip table if already exists (unless remaking), like plant_fraction/make()
9642 05/30/2013 08:16 AM Aaron Marcuse-Kubitza

bugfix: lib/sh/db.sh: mysql_import(): need to use direct connection to DB instead of via ssh, because ssh does not tunnel nonstandard fds
9641 05/30/2013 08:15 AM Aaron Marcuse-Kubitza

lib/sh/db.sh: added ssh2local alias
9640 05/30/2013 07:36 AM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record/run: herbaria_filter.plant_fraction.csv_/make(): use new plant_fraction_for_herbaria_filter view
9639 05/30/2013 07:13 AM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record/run: added plant_fraction_for_herbaria_filter/make(). note that for simplicity, plant_fraction_for_herbaria_filter is a view instead of a table.
9638 05/30/2013 06:50 AM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record/run: .table/(): renamed to */*() because a target named after a table refers to the table unless it has an explicit file extension
9637 05/30/2013 06:49 AM Aaron Marcuse-Kubitza

inputs/GBIF/raw_occurrence_record/run: plant_fraction.table/*(): renamed to plant_fraction/*() because a target named after a table refers to the table unless it has an explicit file extension
9636 05/30/2013 06:41 AM Aaron Marcuse-Kubitza

lib/sh/db.sh: mysql_seal_table(): also revoke GRANT OPTION, which apparently needs to be done in addition (and in a separate command, unlike when granting GRANT OPTION)
9635 05/30/2013 06:40 AM Aaron Marcuse-Kubitza

lib/sh/db.sh: mysql_seal_table(): REVOKE: ignore errors if REVOKE was already run

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