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| Revision:
Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 9496 over 11 years Aaron Marcuse-Kubitza added backups/*.md5
  bin 9530 over 11 years Aaron Marcuse-Kubitza bin/tnrs_db: documented how to estimate total r...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 8798 over 11 years Aaron Marcuse-Kubitza exports/: svn:ignore *.csv
  inputs 9709 over 11 years Aaron Marcuse-Kubitza inputs/GBIF/table.run: table.tsv.md5/make(): on...
  lib 9708 over 11 years Aaron Marcuse-Kubitza lib/sh/make.sh: make(): removed extra space aft...
  mappings 9459 over 11 years Aaron Marcuse-Kubitza bugfix: mappings/VegCore-VegBIEN.csv: place.geo...
  planning 9671 over 11 years Aaron Marcuse-Kubitza *.url: mailto URLs: use the standard e-mail dot...
  schemas 9671 over 11 years Aaron Marcuse-Kubitza *.url: mailto URLs: use the standard e-mail dot...
  web 9614 over 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
Makefile 12.3 KB 9703 over 11 years Aaron Marcuse-Kubitza /Makefile: moved %/remake, %-remake to lib/comm...
README.TXT 22.8 KB 9532 over 11 years Aaron Marcuse-Kubitza bugfix: README.TXT: Full database import: scree...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 450 Bytes 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
9709 06/05/2013 03:11 AM Aaron Marcuse-Kubitza

inputs/GBIF/table.run: table.tsv.md5/make(): only use %-remake if remaking

9708 06/05/2013 03:10 AM Aaron Marcuse-Kubitza

lib/sh/make.sh: make(): removed extra space after --silent

9707 06/04/2013 11:17 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: moved mysql_root() after the mysql->mysql_ANSI alias (and load new aliases) so that it will also use ANSI mode and support "" identifiers

9706 06/04/2013 11:15 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: mysql: always use ANSI mode, to support "" identifiers. note that `` are still supported in this mode, so it also works with SHOW CREATE TABLE output and dumpfiles.

9705 06/04/2013 11:05 PM Aaron Marcuse-Kubitza

bugfix: inputs/GBIF/raw_occurrence_record/run: plant_fraction_for_herbaria_filter/make(): need to make prerequisites first (plant_fraction/make)

9704 06/04/2013 06:35 PM Aaron Marcuse-Kubitza

bugfix: inputs/GBIF/table.run: table.tsv.md5/make(): use %-remake to ensure that the .md5 file is remade, regardless of the .md5 file's mtime relative to table.tsv. you would generally expect table.tsv's new mtime to be newer than the .md5 file's (thus triggering make to run), but if you e.g. ran svn up after making the table.tsv, this might not be the case.

9703 06/04/2013 06:31 PM Aaron Marcuse-Kubitza

/Makefile: moved %/remake, %-remake to lib/common.Makefile because they are generally useful

9702 06/04/2013 06:26 PM Aaron Marcuse-Kubitza

/Makefile: moved %/reinstall to lib/common.Makefile because it is generally useful

9701 06/04/2013 06:07 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: mysql_cmd(): run the command with `time` because in mysql()'s output_data mode, no queries, and therefore no runtimes, are echoed, so the total runtime needs to be echoed separately instead. the total runtime is also useful in general, when many long-running queries are run and you would also like to know the total time (e.g. in make_analytical_db).

9700 06/04/2013 05:54 PM Aaron Marcuse-Kubitza

lib/sh/db.sh: limit(): usage: surrounded query in "" to clarify that it's a string, not a command

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