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| Revision:
Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 9496 over 11 years Aaron Marcuse-Kubitza added backups/*.md5
  bin 9727 over 11 years Aaron Marcuse-Kubitza added bin/make, which runs make, hiding verbose...
  config 7801 almost 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: mk_db: Added command...
  exports 8798 over 11 years Aaron Marcuse-Kubitza exports/: svn:ignore *.csv
  inputs 9709 over 11 years Aaron Marcuse-Kubitza inputs/GBIF/table.run: table.tsv.md5/make(): on...
  lib 9729 over 11 years Aaron Marcuse-Kubitza lib/sh/make.sh: make(): log the filter setup op...
  mappings 9459 over 11 years Aaron Marcuse-Kubitza bugfix: mappings/VegCore-VegBIEN.csv: place.geo...
  planning 9671 over 11 years Aaron Marcuse-Kubitza *.url: mailto URLs: use the standard e-mail dot...
  schemas 9671 over 11 years Aaron Marcuse-Kubitza *.url: mailto URLs: use the standard e-mail dot...
  web 9614 over 11 years Aaron Marcuse-Kubitza web/links/index.htm: updated to Firefox bookmar...
.htaccess 326 Bytes 8771 over 11 years Aaron Marcuse-Kubitza /.htaccess: use canonical URL without symlinks
Makefile 12.3 KB 9703 over 11 years Aaron Marcuse-Kubitza /Makefile: moved %/remake, %-remake to lib/comm...
README.TXT 22.8 KB 9532 over 11 years Aaron Marcuse-Kubitza bugfix: README.TXT: Full database import: scree...
fix_perms 97 Bytes 7560 almost 12 years Aaron Marcuse-Kubitza Added root fix_perms
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 38.1 KB 7222 almost 12 years Aaron Marcuse-Kubitza new_terms.csv: Regenerated
run 450 Bytes 9074 over 11 years Aaron Marcuse-Kubitza *{.sh,run}: removed extra space between functio...
unmapped_terms.csv 13.1 KB 7201 almost 12 years Aaron Marcuse-Kubitza **/new_terms.csv, **/unmapped_terms.csv: Regene...

Latest revisions

# Date Author Comment
9729 06/06/2013 12:22 AM Aaron Marcuse-Kubitza

lib/sh/make.sh: make(): log the filter setup operations at log_level 2 so they do not clutter up normal output

9728 06/06/2013 12:13 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: filter_fd: alias-expand filter_cmd

9727 06/06/2013 12:08 AM Aaron Marcuse-Kubitza

added bin/make, which runs make, hiding verbose messages about making included Makefiles. this should be used in preference to plain make, to avoid excessive log messages that prevent the user from seeing the core commands that are being run.

9726 06/06/2013 12:05 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: added no_PATH_recursion(), which allows running a system command of the same name as the script

9725 06/06/2013 12:04 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: added PATH_rm(), which removes components from the PATH

9724 06/06/2013 12:03 AM Aaron Marcuse-Kubitza

lib/sh/util.sh: added $top_dir_abs, $top_dir_orig

9723 06/05/2013 11:44 PM Aaron Marcuse-Kubitza

bugfix: lib/sh/util.sh: command(): use `builtin command` instead of `exec` so that options like -p (reset PATH) work properly. also, the command builtin it overrides is designed to be used with more than just external commands, and command() should not impose additional limitations.

9722 06/05/2013 10:54 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: added self_sys alias, which uses only system utilities (`command -p`) instead of the current PATH

9721 06/05/2013 10:37 PM Aaron Marcuse-Kubitza

lib/sh/make.sh: make(): at verbosity < 3, hide messages about making included Makefiles. this makes the make output much more readable when a Makefile contains an include statement, because there won't be a ton of log messages every time a Makefile is included. this filtering is so useful that it probably makes sense to run make for any of our Makefiles using `lib/runscripts/util.run make ...` instead of plain make. compare e.g. `make inputs/ACAD/Specimen/map.csv` (53 lines of output) and `lib/runscripts/util.run make inputs/ACAD/Specimen/map.csv` (17 lines of output, 1/3 as much).

9720 06/05/2013 10:15 PM Aaron Marcuse-Kubitza

lib/sh/util.sh: log++: before cmd: documented that you need to use "log++" instad of log++ to avoid using the log++ alias, which prepends a log_local call. omitting the quotes is generally not a problem, but when there is another command wrapping the log++, you need the "" to avoid the wrapper applying to log_local's declare call instead.

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