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Revision 9780

Added by Aaron Marcuse-Kubitza over 11 years ago

inputs/GBIF/raw_occurrence_record_plants/run: herbaria_filter/make(): use new ih_herbarium table instead of the herbaria_filter.ih.csv_ file directly

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inputs/GBIF/raw_occurrence_record_plants/run
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	local table="$target_stem"
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	if remaking; then mk_drop|mysql; fi
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	herbaria_filter.ih.csv_/make
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	ih_herbarium/make
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	plant_fraction_for_herbaria_filter/make
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	(benign_error=1 mysql <<'EOF'
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CREATE TABLE `herbaria_filter` (
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 `institution_code` varchar(255) NOT NULL PRIMARY KEY
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) ENGINE=MyISAM DEFAULT CHARSET=utf8 COMMENT='contains all of IH.vegpath.org?&Index+Herbariorum'
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) ENGINE=MyISAM DEFAULT CHARSET=utf8
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EOF
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) || skip_table || return 0
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	time (
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	mysql <<EOF
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INSERT INTO "herbaria_filter"
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INSERT IGNORE INTO $table
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SELECT institution_code FROM ih_herbarium
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;
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INSERT IGNORE INTO $table
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SELECT institution_code FROM plant_fraction_for_herbaria_filter
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;
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EOF
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	append=1 mysql_import <"$top_dir"/herbaria_filter.ih.csv_
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	) || return
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}
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herbaria_filter/seal()


  		












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