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8699
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aaronmk
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#!/bin/bash -e
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# links to locally-available resources
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8893
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aaronmk
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. "$(dirname "${BASH_SOURCE[0]}")"/util.sh
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9014
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aaronmk
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. "$(dirname "${BASH_SOURCE[0]}")"/db.sh
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8699
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aaronmk
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8705
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aaronmk
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if self_not_included; then
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9331
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aaronmk
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root_dir="$(canon_rel_path "$(dirname "${BASH_SOURCE[0]}")"/../..)" || return
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9787
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aaronmk
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root_rel_path() { log++; base_dir="$root_dir" path="$1" rel_path; }
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8699
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aaronmk
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bin_dir="$root_dir"/bin
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9331
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aaronmk
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bin_dir_abs="$(realpath "$bin_dir")" || return
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| 14 |
8705
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aaronmk
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8925
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aaronmk
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export PATH="$bin_dir_abs:$PATH"
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8708
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aaronmk
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8939
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aaronmk
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#### make
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9074
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aaronmk
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root_make() { echo_func; make --directory="$root_dir" "$@"; }
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8939
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aaronmk
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8890
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aaronmk
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#### connection vars
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9630
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aaronmk
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: "${remote_ssh_server=vegbiendev.nceas.ucsb.edu}"
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: "${remote_server=}"
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8890
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aaronmk
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: "${local_server=localhost}"
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: "${local_user=bien}"
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: "${local_password="$(cat "$root_dir"/config/bien_password)"}"
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9650
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aaronmk
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: "${local_pg_database=vegbien}"
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9575
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aaronmk
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: "${root_user=root}"
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: "${root_password=$local_password}"
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8890
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aaronmk
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#### databases
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### MySQL
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8891
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aaronmk
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: "${postgres_compat=1}"
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| 38 |
9577
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aaronmk
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mysql_local() { echo_func; use_local_remote; mysql "$@"; }
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9153
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aaronmk
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mysql_export_local() { echo_func; use_local_remote; mysql_export "$@"; }
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9074
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aaronmk
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mysqldump_local() { echo_func; use_local_remote; mysqldump_diffable "$@"; }
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8892
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aaronmk
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9576
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aaronmk
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mysql_root() { echo_func; use_local_remote; use_root; mysql "$@"; }
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| 46 |
8890
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aaronmk
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### PostgreSQL
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9650
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aaronmk
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func_override psql__db_sh
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9074
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aaronmk
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psql() # usage: [file=...] [dir=...] self
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8777
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aaronmk
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{
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| 51 |
9235
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aaronmk
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echo_func; kw_params file dir
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| 52 |
9645
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aaronmk
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if test "$file"; then local dir="${dir:-$(dirname "$file")}"; fi
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| 53 |
8834
|
aaronmk
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local dir="${dir:-$top_dir}"
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| 54 |
9427
|
aaronmk
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mk_schema_esc
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mk_table_esc
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| 56 |
8777
|
aaronmk
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| 57 |
9650
|
aaronmk
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use_local
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| 58 |
8777
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aaronmk
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(cat <<EOF
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\cd $dir
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9427
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aaronmk
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\set schema $schema_esc
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\set table $table_esc
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\set table_str '''$table_esc'''
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SET search_path TO $schema_esc, util;
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| 64 |
8777
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aaronmk
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EOF
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| 65 |
9645
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aaronmk
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cat${file:+ "$file"}
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| 66 |
9650
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aaronmk
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)|psql__db_sh "$@"
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| 67 |
8777
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aaronmk
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}
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| 69 |
9074
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aaronmk
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public_schema_exists() { psql_script_vegbien </dev/null 2>/dev/null; }
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| 70 |
9046
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aaronmk
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| 71 |
8705
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aaronmk
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fi
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