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Revision 9875

Added by Aaron Marcuse-Kubitza about 11 years ago

bugfix: inputs/input.Makefile: %/VegBIEN.csv: use header from map.csv instead of the new columns, so that source.shortname is set to GBIF instead of VegCore

View differences:

inputs/GBIF/raw_occurrence_record_plants/VegBIEN.csv
1 
VegCore,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
1 
GBIF,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Filter; Comments,Comments
2 2 
accessionNumber,"/_if[@name=""if specimen""]/cond/_exists",
3 3 
dataProviderRecordID,"/_if[@name=""if specimen""]/cond/_exists",
4 4 
specimenHolderInstitutions,"/_if[@name=""if specimen""]/else/source/shortname/_first/1",
inputs/input.Makefile
339 339 
endif
340 340 

  		




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%/VegBIEN.csv: %/map.csv $(coreMap)


  		




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	<$< $(bin)/cat_cols 1 2$(if $(wildcard $*/run),|$(bin)/cols 1 1 3\


  		




  
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	<$< $(bin)/cat_cols 1 2$(if $(wildcard\


  		




  
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$*/run),|$(bin)/cols 1 1 3|(head -1 $<; tail -n +2)\


  		




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)|$(bin)/join $(coreMap)|$(bin)/sort_map >$@


  		




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maps += $(autogenMaps)


  		




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