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Name Size Revision Age Author Comment
  _archive 258 almost 13 years Aaron Marcuse-Kubitza Moved pre-BIEN 3 files into _archive folder
  bin 990 almost 13 years Aaron Marcuse-Kubitza bin/map: Only print error/run time stats in ver...
  config 272 almost 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 990 almost 13 years Aaron Marcuse-Kubitza bin/map: Only print error/run time stats in ver...
  lib 989 almost 13 years Aaron Marcuse-Kubitza Moved value to string conversion functions infr...
  mappings 972 almost 13 years Aaron Marcuse-Kubitza inputs/SALVIAS/maps/VegX.organisms.csv: Mapped ...
  schemas 956 almost 13 years Aaron Marcuse-Kubitza Regenerated vegbien.ERD exports
  to_do 811 almost 13 years Aaron Marcuse-Kubitza Added to_do/milestones.doc
Makefile 6.07 KB 879 almost 13 years Aaron Marcuse-Kubitza Switched to using inputs/test as main test target
README.TXT 1.62 KB 879 almost 13 years Aaron Marcuse-Kubitza Switched to using inputs/test as main test target
map 889 Bytes 957 almost 13 years Aaron Marcuse-Kubitza map: Map standard DB names to original DB names...

Latest revisions

# Date Author Comment
990 02/14/2012 02:41 PM Aaron Marcuse-Kubitza

bin/map: Only print error/run time stats in verbose mode. input.Makefile: Run import in verbose mode so that error/run time stats are still printed.

989 02/14/2012 02:36 PM Aaron Marcuse-Kubitza

Moved value to string conversion functions infrom util.py to new module format.py

988 02/14/2012 02:32 PM Aaron Marcuse-Kubitza

exc.py, profiling.py: Use util.int2str() to print # iters with thousands separators

987 02/14/2012 02:32 PM Aaron Marcuse-Kubitza

util.py: Added int2str()

986 02/14/2012 02:26 PM Aaron Marcuse-Kubitza

bin/map: Document that the exit status is the # of errors in the import, up to the maximum exit status

985 02/14/2012 02:24 PM Aaron Marcuse-Kubitza

exc.py: Generalize ExTracker to not just print the # of errors at exit. Instead, provide an exit() method that the ExTracker creator can call at exit to set the exit status to the # of errors. This fixes the Python bug where a benign error message was printed if SystemExit was raised in an atexit function.

984 02/14/2012 02:15 PM Aaron Marcuse-Kubitza

bin/map: Set ExPercentTracker's iter_text. Start ExPercentTracker after input processing, because errors in command line options should just end the program and don't need to be tracked.

983 02/14/2012 02:13 PM Aaron Marcuse-Kubitza

exc.py: ExPercentTracker: Added ability to set custom iter_text, similar to ItersProfiler

982 02/14/2012 02:07 PM Aaron Marcuse-Kubitza

bin/map: Use profiling.ItersProfiler. Refactored input row count calculation to have each function aggregate and return the row count, and then display the row count and statistics that depend on it at the end of the program.

981 02/14/2012 02:06 PM Aaron Marcuse-Kubitza

Added profiling.py to time operations and provide the user with statistical information

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