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Name Size Revision Age Author Comment
  logs 4122 over 12 years Aaron Marcuse-Kubitza inputs: Moved log files into subfolders, using ...
.map.csv.last_cleanup 0 Bytes 4118 over 12 years Aaron Marcuse-Kubitza inputs: Moved maps into subfolders, using the s...
VegBIEN.csv 10.7 KB 7196 almost 12 years Aaron Marcuse-Kubitza inputs/*/*/map.csv: Remapped recordNumber to ne...
map.csv 1.91 KB 7196 almost 12 years Aaron Marcuse-Kubitza inputs/*/*/map.csv: Remapped recordNumber to ne...
new_terms.csv 812 Bytes 7196 almost 12 years Aaron Marcuse-Kubitza inputs/*/*/map.csv: Remapped recordNumber to ne...
test.xml.ref 12.5 KB 7196 almost 12 years Aaron Marcuse-Kubitza inputs/*/*/map.csv: Remapped recordNumber to ne...
unmapped_terms.csv 292 Bytes 4979 about 12 years Aaron Marcuse-Kubitza inputs/*/*/map.csv: Prefix a * to every term th...
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Latest revisions

# Date Author Comment
11970 01/20/2014 11:33 AM Aaron Marcuse-Kubitza

moved everything into /trunk/ to create the standard svn layout, for use with tools that require this (eg. git-svn). IMPORTANT: do NOT do an `svn up`. instead, re-use your working copy's existing files with `svn switch` (http://svnbook.red-bean.com/en/1.6/svn.ref.svn.c.switch.html).

7217 01/14/2013 03:42 PM Aaron Marcuse-Kubitza

inputs/Madidi/: Refreshed. Note that new export has a completely new schema.

7196 01/11/2013 08:48 AM Aaron Marcuse-Kubitza

inputs/*/*/map.csv: Remapped recordNumber to new individualCode where applicable

7195 01/11/2013 08:44 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Mapped individualCode. authortaxoncode: Prefer tag over recordNumber (collectionnumber), because this applies to the plant rather than the specimen.

7190 01/11/2013 07:33 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: plantobservation: Renamed collectionnumber to authorplantcode since this number, which identifies the plant, is actually different from the collectionnumber that identifies the specimen collected from it. This distinction is meaningful for plots data, but generally not for specimens data.

7186 01/11/2013 07:02 AM Aaron Marcuse-Kubitza

inputs/*/*/test.xml.ref: Restored inserted row counts, which had gotten auto-accepted from a test run on a non-empty DB

7169 01/11/2013 02:59 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Removed taxonlabel for original taxondetermination, because the original taxondetermination is not scrubbed by scrub.make (only the most current taxondetermination gets scrubbed, because only a single scrubbed determination is added by scrub.make). This still leaves the original taxondetermination's taxonverbatim, which stores the taxonomic information for historical purposes.

7162 01/11/2013 02:03 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Removed TNRS input taxonlabels meant to cross-link to taxonlabels added by the TNRS import, because TNRS taxondeterminations are now created instead

7142 01/09/2013 03:59 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: taxonlabel.taxonomicname: Prepend the family to the rest of the name using new _merge_prefix() instead of _join_words()/_nullIf(), so that any input taxonomic name that includes the family will not have the family duplicated in the combined taxonomic name. Previously, the duplication was removed only when the rest of the input name was equal to the family. This change fixes a bug in the new TNRS import where a pre-concatenated taxonomic name (Accepted_scientific_name) which includes the family is now used instead of Accepted_name, which only includes it when it's equal to the family.

7009 12/21/2012 12:07 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: locationID/locationName + subplot -> location.sourceaccessioncode mapping: Fixed bug where subplot was incorrectly being mapped to this field even when there was no location*. (This field can only be populated if both location* and subplot are specified.) Also only map locationID for this, to avoid inconsistencies where one table supplies locationID+subplot, while another table supplies locationName+subplot, but they both get mapped to the same field, preventing plots from being matched up with their observations when creating the analytical_stem.

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