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Name Size Revision Age Author Comment
  logs 10168 over 11 years Aaron Marcuse-Kubitza inputs/*/*/logs: updated svn:ignore
+header.txt 33 Bytes 5434 about 12 years Aaron Marcuse-Kubitza inputs/test_taxonomic_names/Taxon/+header.txt: ...
.map.csv.last_cleanup 0 Bytes 5177 about 12 years Aaron Marcuse-Kubitza Added inputs/test_taxonomic_names/
VegBIEN.csv 42 Bytes 10260 over 11 years Aaron Marcuse-Kubitza inputs/*/ which do not contain any explicit col...
header.csv 40 Bytes 10176 over 11 years Aaron Marcuse-Kubitza added inputs/test_taxonomic_names/Taxon/header.csv
map.csv 132 Bytes 13113 over 10 years Aaron Marcuse-Kubitza fix: inputs/test_taxonomic_names/Taxon/map.csv:...
run 63 Bytes 10260 over 11 years Aaron Marcuse-Kubitza inputs/*/ which do not contain any explicit col...
test.xml.ref 1.63 KB 13113 over 10 years Aaron Marcuse-Kubitza fix: inputs/test_taxonomic_names/Taxon/map.csv:...
testNames.txt 499 Bytes 5218 about 12 years Aaron Marcuse-Kubitza Added inputs/test_taxonomic_names/Taxon/testNam...
unmapped_terms.csv 10 Bytes 10209 over 11 years Aaron Marcuse-Kubitza inputs/*/*/map.csv for CSV tables with a row_nu...
  • svn:ignore: *

Latest revisions

# Date Author Comment
13113 04/10/2014 01:25 PM Aaron Marcuse-Kubitza

fix: inputs/test_taxonomic_names/Taxon/map.csv: scientificName: remapped to scientificName instead of taxonName as this does include the author for some names

11970 01/20/2014 11:33 AM Aaron Marcuse-Kubitza

moved everything into /trunk/ to create the standard svn layout, for use with tools that require this (eg. git-svn). IMPORTANT: do NOT do an `svn up`. instead, re-use your working copy's existing files with `svn switch` (http://svnbook.red-bean.com/en/1.6/svn.ref.svn.c.switch.html).

11396 10/21/2013 07:14 PM Aaron Marcuse-Kubitza

fix: bin/map: put template: comment out the "Put template:" label so that the output is valid XML, and displays properly in a browser rather than showing a syntax error

11107 09/29/2013 08:58 PM Aaron Marcuse-Kubitza

bugfix: mappings/VegCore-VegBIEN.csv: nest all taxonoccurrences inside a stratum event, so that the parent locationevent is always fully populated before child locationevents point to it. (previously, a stub parent event was created when the child event was imported first, which blocked the fully-populated parent event from being inserted later on.) this uses auto-folding (for VegBank/CVS) and auto-forwarding (for other datasources) to prune empty stratum events for taxonoccurrences that don't have strata. (see wiki.vegpath.org/Auto-folding, wiki.vegpath.org/Auto-forwarding for more info about these normalization techniques.) note that the inserted row counts stay exactly the same for all datasources except VegBank (which was being fixed), indicating that this signficant change to the mappings did not change the semantics of the import of taxonoccurrences.

10866 09/04/2013 11:06 PM Aaron Marcuse-Kubitza

inputs/*/*/test.xml.ref: updated source.shortname for new datasource name, which now starts out with .new suffix

10260 07/11/2013 12:53 PM Aaron Marcuse-Kubitza

inputs/*/ which do not contain any explicit collisions (wiki.vegpath.org/2013-06-27_conference_call#To-do-for-Aaron > #3.2 > the following datasources ...): switched to new-style import, which adds the staging table column renaming

10209 07/10/2013 02:32 AM Aaron Marcuse-Kubitza

inputs/*/*/map.csv for CSV tables with a row_num column: added missing row_num entry, which is needed by the staging table column renaming to make the order of the map.csv columns match the order in the staging table

10176 07/06/2013 05:05 PM Aaron Marcuse-Kubitza

added inputs/test_taxonomic_names/Taxon/header.csv

10168 07/06/2013 02:22 PM Aaron Marcuse-Kubitza

inputs/*/*/logs: updated svn:ignore

8176 03/25/2013 09:01 PM Aaron Marcuse-Kubitza

inputs/input.Makefile: %/.map.csv.last_cleanup: Run fix_line_endings after canon/translate to standardize Python's \r\n line endings back to \n. This prevents issues with mixed line endings because LibreOffice (and probably Excel) treat all cell-internal line endings as \n but row line endings as whatever the file had, while text editors like jEdit translate all line endings to whatever the autodetected line ending is. (This creates spurious line ending diffs when a map spreadsheet containing multiline cells is edited in a text editor.)

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