Revision 10297b73
Added by Benoit Parmentier almost 9 years ago
| climate/research/oregon/interpolation/master_script_stage_2_3.R | ||
|---|---|---|
| 68 | 68 |
source(file.path(script_path,"GAM_fusion_function_multisampling_validation_metrics.R")) |
| 69 | 69 |
|
| 70 | 70 |
#sub sampling of stations |
| 71 |
source(file.path(script_path2,"subsampling_data_func.R")) #Include GAM_day |
|
| 71 |
source(file.path(script_path2,"subsampling_data_function.R")) #Include GAM_day
|
|
| 72 | 72 |
|
| 73 | 73 |
#stages_to_run<-c(0,2,3,4,5) #MRun only raster fitting, prediction and assessemnt (providing lst averages, covar brick and met stations) |
| 74 | 74 |
#stages_to_run<-c(0,2,3,0,0) |
| ... | ... | |
| 311 | 311 |
#max number of cells to read in memory |
| 312 | 312 |
max_mem<-args[11] |
| 313 | 313 |
#rasterOptions(maxmemory=1e+07,timer=TRUE) |
| 314 |
out_path_daily <- file.path(out_path,range_years[1]) #<-c("1992","1993") #right bound not included in the range!!
|
|
| 315 |
out_path_clim <- file.path(out_path,paste("clim_",range_years_clim[1],"_",range_years_clim[2],sep="")) #<-c("1990","2001") #right bound not included in the range!!
|
|
| 314 | 316 |
|
| 315 | 317 |
#Collect all parameters in a list |
| 316 | 318 |
list_param_raster_prediction<-list(list_param_data_prep,screen_data_training, |
| 317 | 319 |
seed_number,nb_sample,step,constant,prop_minmax,dates_selected, |
| 318 | 320 |
seed_number_month,nb_sample_month,step_month,constant_month,prop_minmax_month, |
| 319 |
list_models,list_models2,interp_method2,lst_avg,out_path,script_path,use_clim_image,join_daily, |
|
| 321 |
list_models,list_models2,interp_method2,lst_avg,out_path_daily,out_path_clim,script_path,use_clim_image,join_daily,
|
|
| 320 | 322 |
interpolation_method,num_cores,max_mem) |
| 321 | 323 |
names(list_param_raster_prediction)<-c("list_param_data_prep","screen_data_training",
|
| 322 | 324 |
"seed_number","nb_sample","step","constant","prop_minmax","dates_selected", |
| 323 | 325 |
"seed_number_month","nb_sample_month","step_month","constant_month","prop_minmax_month", |
| 324 |
"list_models","list_models2","interp_method2","lst_avg","out_path","script_path","use_clim_image","join_daily", |
|
| 326 |
"list_models","list_models2","interp_method2","lst_avg","out_path","out_path_clim","script_path","use_clim_image","join_daily",
|
|
| 325 | 327 |
"interpolation_method","num_cores","max_mem") |
| 326 | 328 |
|
| 327 | 329 |
#debug(raster_prediction_fun) |
Also available in: Unified diff
master script stage 2_3 changes in query to avoid duplication of climatology database queries