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Revision 52ae84b1

Added by Adam Wilson over 11 years ago

Adding script to upload covariate data to Pleiades

View differences:

climate/procedures/Pleiades_MOD35.R
86 86 
proclist=expand.grid(date=alldates,tile=tiles)
87 87 
proclist$year=substr(proclist$date,1,4)
88 88 

  		




  89
  
  
    
## identify tile-dates with no available swaths


  		




  
  89
  
    
 ## identify tile-dates with no available swaths


  		




  90
  90
  
    
avail=unique(cbind.data.frame(tile=fs$tile,date=fs$dateid)[fs$exists, ])


  		




  91
  91
  
    
proclist$avail=paste(proclist$tile,proclist$date,sep="_")%in%paste(avail$tile,avail$date,sep="_")


  		




  92
  92
  
    

  		




  ......




  119
  119
  
    
### qsub script


  		




  120
  120
  
    
cat(paste("


  		




  121
  121
  
    
#PBS -S /bin/bash


  		




  122
  
  
    
##PBS -l select=1:ncpus=8:mpiprocs=8


  		




  123
  
  
    
#PBS -l select=100:ncpus=8:mpiprocs=8


  		




  124
  
  
    
#PBS -l walltime=8:00:00


  		




  125
  
  
    
##PBS -l walltime=2:00:00


  		




  
  122
  
    
#PBS -l select=20:ncpus=8:mpiprocs=8


  		




  
  123
  
    
##PBS -l select=100:ncpus=8:mpiprocs=8


  		




  
  124
  
    
##PBS -l walltime=8:00:00


  		




  
  125
  
    
#PBS -l walltime=4:00:00


  		




  126
  126
  
    
#PBS -j n


  		




  127
  127
  
    
#PBS -m be


  		




  128
  128
  
    
#PBS -N mod35


  		




  ......




  130
  130
  
    
##PBS -q devel


  		




  131
  131
  
    
#PBS -V


  		




  132
  132
  
    

  		




  133
  
  
    
CORES=800


  		




  134
  
  
    
#CORES=160


  		




  
  133
  
    
#CORES=800


  		




  
  134
  
    
CORES=160


  		




  135
  135
  
    

  		




  136
  136
  
    
HDIR=/u/armichae/pr/


  		




  137
  137
  
    
  source $HDIR/etc/environ.sh


  		












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