Revision 5808debe
Added by Benoit Parmentier over 11 years ago
| climate/research/oregon/interpolation/master_script_temp.R | ||
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#STAGE 5: Output analyses: assessment of results for specific dates... |
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# |
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#AUTHOR: Benoit Parmentier |
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#DATE: 08/12/2013
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#DATE: 08/13/2013
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#PROJECT: NCEAS INPLANT: Environment and Organisms --TASK#363, TASK$568-- |
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#met_stations_outfiles_obj_file<-"met_stations_outfiles_obj_kriging_daily__365d_kriging_daily_mults10_lst_comb3_08062013.RData" |
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var<-"TMAX" # variable being interpolated |
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out_prefix<-"_365d_kriging_fus_lst_comb3_08122013" #User defined output prefix
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out_suffix<-"_OR_08122013" #Regional suffix
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out_prefix<-"_365d_gam_day_lst_comb3_08132013" #User defined output prefix
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out_suffix<-"_OR_08132013" #Regional suffix
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out_suffix_modis <-"_05302013" #pattern to find tiles produced previously |
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#interpolation_method<-c("gam_fusion","gam_CAI","gam_daily") #other otpions to be added later
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#interpolation_method<-c("gam_CAI") #other otpions to be added later
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#interpolation_method<-c("gam_fusion") #other otpions to be added later
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interpolation_method<-c("kriging_fusion") #other otpions to be added later
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#interpolation_method<-c("kriging_fusion") #other otpions to be added later
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#interpolation_method<-c("gwr_fusion") #other otpions to be added later
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#interpolation_method<-c("gwr_CAI") #other otpions to be added later
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#interpolation_method<-c("kriging_CAI")
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#interpolation_method<-c("gam_daily") #other otpions to be added later
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interpolation_method<-c("gam_daily") #other otpions to be added later
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#interpolation_method<-c("kriging_daily") #other otpions to be added later
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#interpolation_method<-c("gwr_daily") #other otpions to be added later
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#LC1: Evergreen/deciduous needleleaf trees |
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#Combination 3: for paper baseline=s(lat,lon)+s(elev) |
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# list_models<-c("y_var ~ s(lat,lon) + s(elev_s)",
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# "y_var ~ s(lat,lon) + s(elev_s) + s(N_w)",
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# "y_var ~ s(lat,lon) + s(elev_s) + s(E_w)",
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# "y_var ~ s(lat,lon) + s(elev_s) + s(LST)",
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# "y_var ~ s(lat,lon) + s(elev_s) + s(DISTOC)",
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# "y_var ~ s(lat,lon) + s(elev_s) + s(LC1)",
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# "y_var ~ s(lat,lon) + s(elev_s) + s(CANHGHT)",
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# "y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,LC1)",
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# "y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,CANHGHT)")
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list_models<-c("y_var ~ s(lat,lon) + s(elev_s)",
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"y_var ~ s(lat,lon) + s(elev_s) + s(N_w)", |
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"y_var ~ s(lat,lon) + s(elev_s) + s(E_w)", |
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"y_var ~ s(lat,lon) + s(elev_s) + s(LST)", |
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"y_var ~ s(lat,lon) + s(elev_s) + s(DISTOC)", |
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"y_var ~ s(lat,lon) + s(elev_s) + s(LC1)", |
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"y_var ~ s(lat,lon) + s(elev_s) + s(CANHGHT)", |
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"y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,LC1)", |
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"y_var ~ s(lat,lon) + s(elev_s) + s(LST) + ti(LST,CANHGHT)") |
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#list_models<-c("y_var ~ lat*lon + elev_s")
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#list_models<-c("y_var ~ s(lat,lon) + s(elev_s)")
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list_models<-c("y_var ~ lat*lon + elev_s",
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"y_var ~ lat*lon + elev_s + N_w", |
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"y_var ~ lat*lon + elev_s + E_w", |
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"y_var ~ lat*lon + elev_s + LST", |
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"y_var ~ lat*lon + elev_s + DISTOC", |
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"y_var ~ lat*lon + elev_s + LC1", |
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"y_var ~ lat*lon + elev_s + CANHGHT", |
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"y_var ~ lat*lon + elev_s + LST + I(LST*LC1)", |
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"y_var ~ lat*lon + elev_s + LST + I(LST*CANHGHT)") |
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# list_models<-c("y_var ~ lat*lon + elev_s",
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# "y_var ~ lat*lon + elev_s + N_w",
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# "y_var ~ lat*lon + elev_s + E_w",
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# "y_var ~ lat*lon + elev_s + LST",
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# "y_var ~ lat*lon + elev_s + DISTOC",
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# "y_var ~ lat*lon + elev_s + LC1",
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# "y_var ~ lat*lon + elev_s + CANHGHT",
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# "y_var ~ lat*lon + elev_s + LST + I(LST*LC1)",
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# "y_var ~ lat*lon + elev_s + LST + I(LST*CANHGHT)")
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#Default name of LST avg to be matched |
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lst_avg<-c("mm_01","mm_02","mm_03","mm_04","mm_05","mm_06","mm_07","mm_08","mm_09","mm_10","mm_11","mm_12")
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Also available in: Unified diff
running gam daily comb3 OR with revised screening for paper analyses